RNA–Protein interactions for RNA: snR83

snR83, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR83, Length 306 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR83	snR83	ASP3-1	P0CZ17	362 aa		2.64	□□□□□ -1.99
snR83	snR83	RNA1	P11745	407 aa	Known RBP	2.64	□□□□□ -1.99
snR83	snR83	TOA1	P32773	286 aa		2.64	□□□□□ -1.99
snR83	snR83	WSS1	P38838	269 aa		2.64	□□□□□ -1.99
snR83	snR83	MNL1	P38888	796 aa		2.64	□□□□□ -1.99
snR83	snR83	PFS2	P42841	465 aa	Known RBP	2.64	□□□□□ -1.99
snR83	snR83	CIN2	P46670	268 aa		2.64	□□□□□ -1.99
snR83	snR83	CIK1	Q01649	594 aa		2.64	□□□□□ -1.99
snR83	snR83	SPE3	Q12074	293 aa	Known RBP	2.64	□□□□□ -1.99
snR83	snR83	TIR4	Q12218	487 aa	Predicted RBP	2.64	□□□□□ -1.99
snR83	snR83	YPS3	Q12303	508 aa		2.64	□□□□□ -1.99
snR83	snR83	SFM1	Q12314	213 aa		2.64	□□□□□ -1.99
snR83	snR83	TPI1	P00942	248 aa	Known RBP	2.63	□□□□□ -1.99
snR83	snR83	MAS2	P11914	482 aa		2.63	□□□□□ -1.99
snR83	snR83	FMT1	P32785	401 aa		2.63	□□□□□ -1.99
snR83	snR83	VEL1	P53058	206 aa		2.63	□□□□□ -1.99
snR83	snR83	YOR376W	Q08900	122 aa		2.63	□□□□□ -1.99
snR83	snR83	SRO7	Q12038	1033 aa		2.63	□□□□□ -1.99
snR83	snR83	URB1	P34241	1764 aa	Known RBP	2.63	□□□□□ -1.99
snR83	snR83	FKS3	Q04952	1785 aa		2.62	□□□□□ -1.99
snR83	snR83	RPL16A	P26784	199 aa	Known RBP	2.62	□□□□□ -1.99
snR83	snR83	ANP1	P32629	500 aa		2.62	□□□□□ -1.99
snR83	snR83	KAP104	P38217	918 aa	Known RBP	2.62	□□□□□ -1.99
snR83	snR83	CTK3	P46963	296 aa	Predicted RBP	2.62	□□□□□ -1.99
snR83	snR83	FSH2	Q05015	223 aa		2.62	□□□□□ -1.99
snR83	snR83	NOP6	Q07623	225 aa	Known RBP	2.62	□□□□□ -1.99
snR83	snR83	RPN5	Q12250	445 aa	Known RBP	2.62	□□□□□ -1.99
snR83	snR83	BI3	Q9ZZW7	517 aa		2.62	□□□□□ -1.99
snR83	snR83	HEM4	P06174	275 aa		2.61	□□□□□ -1.99
snR83	snR83	LDS1	P31379	325 aa		2.61	□□□□□ -1.99
snR83	snR83	VMA8	P32610	256 aa	Known RBP	2.61	□□□□□ -1.99
snR83	snR83	YBR241C	P38142	488 aa		2.61	□□□□□ -1.99
snR83	snR83	SPP381	P38282	291 aa	Predicted RBP	2.61	□□□□□ -1.99
snR83	snR83	GAT3	Q07928	141 aa		2.61	□□□□□ -1.99
snR83	snR83	YDR061W	Q12298	539 aa		2.61	□□□□□ -1.99
snR83	snR83	RPL1A	P0CX43	217 aa	Known RBP	2.6	□□□□□ -1.99
snR83	snR83	RPL1B	P0CX44	217 aa	Known RBP	2.6	□□□□□ -1.99
snR83	snR83	SMP1	P38128	452 aa		2.6	□□□□□ -1.99
snR83	snR83	ECM34	P38728	170 aa		2.6	□□□□□ -1.99
snR83	snR83	YHR177W	P38867	453 aa		2.6	□□□□□ -1.99
snR83	snR83	LCB2	P40970	561 aa		2.6	□□□□□ -1.99
snR83	snR83	YGR067C	P53243	804 aa		2.6	□□□□□ -1.99
snR83	snR83	CWC22	P53333	577 aa	Known RBP	2.6	□□□□□ -1.99
snR83	snR83	RNH201	P53942	307 aa		2.6	□□□□□ -1.99
snR83	snR83	SLF1	Q12034	447 aa	Known RBP	2.6	□□□□□ -1.99
snR83	snR83	YDL109C	Q12103	647 aa		2.6	□□□□□ -1.99
snR83	snR83	ATP16	Q12165	160 aa		2.6	□□□□□ -1.99
snR83	snR83	RFM1	Q12192	310 aa		2.6	□□□□□ -1.99
snR83	snR83	LDB17	Q12342	491 aa		2.6	□□□□□ -1.99
snR83	snR83	HIF1	Q12373	385 aa		2.6	□□□□□ -1.99
snR83	snR83	CFT1	Q06632	1357 aa	Known RBP	2.6	□□□□□ -1.99
snR83	snR83	UNG1	P12887	359 aa		2.59	□□□□□ -1.99
snR83	snR83	EPT1	P22140	391 aa		2.59	□□□□□ -1.99
snR83	snR83	MSP1	P28737	362 aa		2.59	□□□□□ -1.99
snR83	snR83	TPS2	P31688	896 aa	Known RBP	2.59	□□□□□ -1.99
snR83	snR83	MPE1	P35728	441 aa	Known RBP	2.59	□□□□□ -1.99
snR83	snR83	FHL1	P39521	936 aa		2.59	□□□□□ -1.99
snR83	snR83	EFM4	P40516	257 aa		2.59	□□□□□ -1.99
snR83	snR83	COQ5	P49017	307 aa		2.59	□□□□□ -1.99
snR83	snR83	ASN2	P49090	572 aa	Known RBP	2.59	□□□□□ -1.99
snR83	snR83	BIO3	P50277	480 aa		2.59	□□□□□ -1.99
snR83	snR83	IPK1	Q06667	281 aa		2.59	□□□□□ -1.99
snR83	snR83	SNF2	P22082	1703 aa		2.59	□□□□□ -2
snR83	snR83	MRPL8	P22353	238 aa		2.58	□□□□□ -2
snR83	snR83	RRP7	P25368	297 aa	Predicted RBP	2.58	□□□□□ -2
snR83	snR83	COS9	P36034	407 aa		2.58	□□□□□ -2
snR83	snR83	MLH1	P38920	769 aa		2.58	□□□□□ -2
snR83	snR83	YML6	P51998	286 aa		2.58	□□□□□ -2
snR83	snR83	TY4B-H	P0C2J7	1802 aa		2.57	□□□□□ -2
snR83	snR83	TY4B-J	P47024	1803 aa		2.57	□□□□□ -2
snR83	snR83	RPL23A	P0CX41	137 aa	Known RBP	2.57	□□□□□ -2
snR83	snR83	RPL23B	P0CX42	137 aa	Known RBP	2.57	□□□□□ -2
snR83	snR83	PXA2	P34230	853 aa		2.57	□□□□□ -2
snR83	snR83	YJL055W	P47044	245 aa		2.57	□□□□□ -2
snR83	snR83	CDH1	P53197	566 aa		2.57	□□□□□ -2
snR83	snR83	RMI1	Q02685	241 aa		2.57	□□□□□ -2
snR83	snR83	MRX11	Q03079	207 aa		2.57	□□□□□ -2
snR83	snR83	YLH47	Q06493	454 aa		2.57	□□□□□ -2
snR83	snR83	SRN2	Q99176	213 aa		2.57	□□□□□ -2
snR83	snR83	YOL085C	Q99345	113 aa		2.57	□□□□□ -2
snR83	snR83	SSE1	P32589	693 aa	Known RBP	2.56	□□□□□ -2
snR83	snR83	FRT2	P39734	528 aa		2.56	□□□□□ -2
snR83	snR83	RRT13	P40042	185 aa		2.56	□□□□□ -2
snR83	snR83	YGR015C	P53208	328 aa		2.56	□□□□□ -2
snR83	snR83	YPR195C	Q06594	109 aa		2.56	□□□□□ -2
snR83	snR83	SHS1	Q07657	551 aa		2.56	□□□□□ -2
snR83	snR83	DDC1	Q08949	612 aa		2.56	□□□□□ -2
snR83	snR83	MIR1	P23641	311 aa	Known RBP	2.55	□□□□□ -2
snR83	snR83	SPS19	P32573	292 aa	Known RBP	2.55	□□□□□ -2
snR83	snR83	PRY2	P36110	329 aa		2.55	□□□□□ -2
snR83	snR83	SHE1	P38200	338 aa		2.55	□□□□□ -2
snR83	snR83	SHE3	P38272	425 aa	Known RBP	2.55	□□□□□ -2
snR83	snR83	STB1	P42845	420 aa		2.55	□□□□□ -2
snR83	snR83	YJR054W	P47114	497 aa		2.55	□□□□□ -2
snR83	snR83	SLT2	Q00772	484 aa		2.55	□□□□□ -2
snR83	snR83	GAS2	Q06135	555 aa		2.55	□□□□□ -2
snR83	snR83	RAD9	P14737	1309 aa		2.54	□□□□□ -2
snR83	snR83	RPS14A	P06367	137 aa	Known RBP	2.54	□□□□□ -2
snR83	snR83	ZIP1	P31111	875 aa		2.54	□□□□□ -2
snR83	snR83	PMT2	P31382	759 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms