RNA–Protein interactions for RNA: YPL074W

YTA6, Transcript of Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family, yeast

Gene YTA6, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTA6	YPL074W	BDH1	P39714	382 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	COG3	P40094	801 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	LSB3	P43603	459 aa	Known RBP	4.6	□□□□□ -1.67
YTA6	YPL074W	ALK1	P43633	760 aa	Known RBP	4.6	□□□□□ -1.67
YTA6	YPL074W	YJR012C	P47087	207 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	CLA4	P48562	842 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	FLC3	P53121	802 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	YNL184C	P53876	108 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	SPR6	Q01684	191 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	TRM12	Q04235	462 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	PEX12	Q04370	399 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	DUS4	Q06063	367 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	PPM2	Q08282	695 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	RGT2	Q12300	763 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	TFC7	Q12415	435 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	EAF3	Q12432	401 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	YPL119C-A	Q3E751	87 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	HBN1	Q96VH4	193 aa		4.6	□□□□□ -1.67
YTA6	YPL074W	UNG1	P12887	359 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	CDC42	P19073	191 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	PER1	P25625	357 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	AFG1	P32317	509 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	TMA19	P35691	167 aa	Known RBP	4.59	□□□□□ -1.67
YTA6	YPL074W	TCD2	P36101	447 aa	Known RBP	4.59	□□□□□ -1.67
YTA6	YPL074W	STS1	P38637	319 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	YHR122W	P38829	231 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	CRP1	P38845	465 aa	Known RBP	4.59	□□□□□ -1.67
YTA6	YPL074W	GET2	P40056	285 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	BUR6	P40096	142 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	ELO3	P40319	345 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	THI12	P42883	340 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	THI5	P43534	340 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	NUP57	P48837	541 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	PEX31	P53203	462 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	COQ6	P53318	479 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	TUB4	P53378	473 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
YTA6	YPL074W	RIM13	Q03792	727 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	THI13	Q07748	340 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	YPL245W	Q12179	454 aa	Known RBP	4.59	□□□□□ -1.67
YTA6	YPL074W	YDR262W	Q12331	272 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	ERP3	Q12403	225 aa		4.59	□□□□□ -1.67
YTA6	YPL074W	MOT1	P32333	1867 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	CYC1	P00044	109 aa	Predicted RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	NHP6A	P11632	93 aa	Known RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	NUP1	P20676	1076 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	GAC1	P28006	793 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	AEP1	P32493	518 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	SDH3	P33421	198 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	COS9	P36034	407 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	TFA2	P36145	328 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	YBR197C	P38306	217 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	ARN1	P38731	627 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	MDM31	P38880	579 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	CKB2	P38930	258 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	HPA3	P39979	161 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	FET4	P40988	552 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	SNM1	P40993	198 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	VMA21	P41806	77 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	QRI7	P43122	407 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	SSY5	P47002	699 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	DPB11	P47027	764 aa	Predicted RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	NQM1	P53228	333 aa	Predicted RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	NRK1	P53915	240 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	YVH1	Q02256	364 aa	Known RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	CGI121	Q03705	181 aa	Known RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	MRX9	Q07349	420 aa	Known RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	YDR056C	Q12025	205 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	SRF1	Q12516	437 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	COX2	P00410	251 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	ADH3	P07246	375 aa	Known RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	DDI2	P0CH63	225 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	DDI3	P0CH64	225 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	AIM17	P23180	465 aa	Known RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	VBA3	P25594	458 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	PRP45	P28004	379 aa	Predicted RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	SUA7	P29055	345 aa	Predicted RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	MSN2	P33748	704 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	VBA5	P36172	582 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	DTR1	P38125	572 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	YBR053C	P38235	358 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	ICS2	P38284	255 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	MGE1	P38523	228 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	FAD1	P38913	306 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	NET1	P47035	1189 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	TAD2	P47058	250 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	TRM9	P49957	279 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	ALT2	P52892	507 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	STR3	P53101	465 aa	Known RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	ERV29	P53337	310 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	YNR029C	P53729	429 aa	Known RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	CTK1	Q03957	528 aa	Known RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	CUE4	Q04201	117 aa	Predicted RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	ECM18	Q04623	453 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	ATG39	Q06159	398 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	CSI2	Q08054	341 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	MED7	Q08278	222 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	TPO4	Q12256	659 aa		4.58	□□□□□ -1.68
YTA6	YPL074W	RDL1	Q12305	139 aa	Known RBP	4.58	□□□□□ -1.68
YTA6	YPL074W	PFK27	Q12471	397 aa	Predicted RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms