RNA–Protein interactions for RNA: YOR060C

SLD7, Transcript of Protein with a role in chromosomal DNA replication, yeast

Gene SLD7, Length 774 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLD7	YOR060C	SCS3	P53012	380 aa		5.21	□□□□□ -1.58
SLD7	YOR060C	YGL242C	P53066	181 aa		5.21	□□□□□ -1.58
SLD7	YOR060C	CWC25	P53854	179 aa	Known RBP	5.21	□□□□□ -1.58
SLD7	YOR060C	RRN11	Q04712	507 aa		5.21	□□□□□ -1.58
SLD7	YOR060C	YPR091C	Q06833	770 aa		5.21	□□□□□ -1.58
SLD7	YOR060C	FCY22	Q12119	530 aa		5.21	□□□□□ -1.58
SLD7	YOR060C	ICT1	Q12385	394 aa		5.21	□□□□□ -1.58
SLD7	YOR060C	FRS2	P15625	503 aa	Known RBP	5.2	□□□□□ -1.58
SLD7	YOR060C	CHA1	P25379	360 aa	Known RBP	5.2	□□□□□ -1.58
SLD7	YOR060C	POP5	P28005	173 aa		5.2	□□□□□ -1.58
SLD7	YOR060C	ITR2	P30606	609 aa		5.2	□□□□□ -1.58
SLD7	YOR060C	TMT1	P32643	299 aa		5.2	□□□□□ -1.58
SLD7	YOR060C	HAC1	P41546	238 aa		5.2	□□□□□ -1.58
SLD7	YOR060C	YFL040W	P43562	540 aa		5.2	□□□□□ -1.58
SLD7	YOR060C	YPL080C	Q02826	108 aa		5.2	□□□□□ -1.58
SLD7	YOR060C	YMR317W	Q04893	1140 aa		5.2	□□□□□ -1.58
SLD7	YOR060C	RTN1	Q04947	295 aa	Known RBP	5.2	□□□□□ -1.58
SLD7	YOR060C	PBP4	Q07362	185 aa	Known RBP	5.2	□□□□□ -1.58
SLD7	YOR060C	TMS1	Q12116	473 aa		5.2	□□□□□ -1.58
SLD7	YOR060C	TIP41	Q12199	356 aa		5.2	□□□□□ -1.58
SLD7	YOR060C	YBR298C-A	Q8TGK4	73 aa		5.2	□□□□□ -1.58
SLD7	YOR060C	RPL24A	P04449	155 aa	Known RBP	5.19	□□□□□ -1.58
SLD7	YOR060C	RPS8A	P0CX39	200 aa	Known RBP	5.19	□□□□□ -1.58
SLD7	YOR060C	RPS8B	P0CX40	200 aa	Known RBP	5.19	□□□□□ -1.58
SLD7	YOR060C	RSR1	P13856	272 aa		5.19	□□□□□ -1.58
SLD7	YOR060C	COY1	P34237	679 aa		5.19	□□□□□ -1.58
SLD7	YOR060C	CTM1	P38818	585 aa		5.19	□□□□□ -1.58
SLD7	YOR060C	YJR085C	P47131	105 aa	Known RBP	5.19	□□□□□ -1.58
SLD7	YOR060C	YPQ1	Q12010	308 aa		5.19	□□□□□ -1.58
SLD7	YOR060C	SLM3	Q12093	417 aa		5.19	□□□□□ -1.58
SLD7	YOR060C	MSI1	P13712	422 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	DAL2	P25335	343 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	HIS2	P38635	335 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	MST27	P53176	234 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	REX2	P54964	269 aa	Known RBP	5.18	□□□□□ -1.58
SLD7	YOR060C	SPP2	Q02521	185 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	YMR010W	Q03687	405 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	YMR027W	Q04371	470 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	YOR387C	Q08910	206 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	DDC1	Q08949	612 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	YDL109C	Q12103	647 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	APC9	Q12107	265 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	ERV2	Q12284	196 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	YDL199C	Q12407	687 aa		5.18	□□□□□ -1.58
SLD7	YOR060C	HEM4	P06174	275 aa		5.17	□□□□□ -1.58
SLD7	YOR060C	RPL23A	P0CX41	137 aa	Known RBP	5.17	□□□□□ -1.58
SLD7	YOR060C	RPL23B	P0CX42	137 aa	Known RBP	5.17	□□□□□ -1.58
SLD7	YOR060C	NAM2	P11325	894 aa		5.17	□□□□□ -1.58
SLD7	YOR060C	ZRT1	P32804	376 aa		5.17	□□□□□ -1.58
SLD7	YOR060C	NDT80	P38830	627 aa		5.17	□□□□□ -1.58
SLD7	YOR060C	KEL2	P50090	882 aa		5.17	□□□□□ -1.58
SLD7	YOR060C	SEH1	P53011	349 aa	Known RBP	5.17	□□□□□ -1.58
SLD7	YOR060C	IRC4	Q03036	179 aa		5.17	□□□□□ -1.58
SLD7	YOR060C	CWC21	Q03375	135 aa	Known RBP	5.17	□□□□□ -1.58
SLD7	YOR060C	TRM82	Q03774	444 aa		5.17	□□□□□ -1.58
SLD7	YOR060C	PBA1	Q05778	276 aa		5.17	□□□□□ -1.58
SLD7	YOR060C	YLR173W	Q06247	608 aa		5.17	□□□□□ -1.58
SLD7	YOR060C	YOL107W	Q12239	342 aa		5.17	□□□□□ -1.58
SLD7	YOR060C	RPN6	Q12377	434 aa		5.17	□□□□□ -1.58
SLD7	YOR060C	MEI5	P32489	222 aa		5.16	□□□□□ -1.58
SLD7	YOR060C	YHR035W	P38769	630 aa		5.16	□□□□□ -1.58
SLD7	YOR060C	SLM1	P40485	686 aa		5.16	□□□□□ -1.58
SLD7	YOR060C	DFG10	P40526	253 aa		5.16	□□□□□ -1.58
SLD7	YOR060C	YNL320W	P42840	284 aa		5.16	□□□□□ -1.58
SLD7	YOR060C	LIA1	P47120	325 aa	Known RBP	5.16	□□□□□ -1.58
SLD7	YOR060C	RIF2	Q06208	395 aa		5.16	□□□□□ -1.58
SLD7	YOR060C	BER1	Q06688	274 aa	Known RBP	5.16	□□□□□ -1.58
SLD7	YOR060C	TY3A-G	Q12173	290 aa		5.16	□□□□□ -1.58
SLD7	YOR060C	FRE8	Q12209	686 aa		5.16	□□□□□ -1.58
SLD7	YOR060C	TY3A-I	Q99219	290 aa		5.16	□□□□□ -1.58
SLD7	YOR060C	SAL1	D6W196	494 aa		5.15	□□□□□ -1.59
SLD7	YOR060C	RPS18A	P0CX55	146 aa	Known RBP	5.15	□□□□□ -1.59
SLD7	YOR060C	RPS18B	P0CX56	146 aa	Predicted RBP	5.15	□□□□□ -1.59
SLD7	YOR060C	RPB5	P20434	215 aa		5.15	□□□□□ -1.59
SLD7	YOR060C	GCG1	P32656	232 aa	Known RBP	5.15	□□□□□ -1.59
SLD7	YOR060C	SWD2	P36104	329 aa	Predicted RBP	5.15	□□□□□ -1.59
SLD7	YOR060C	PTH1	P38876	190 aa	Known RBP	5.15	□□□□□ -1.59
SLD7	YOR060C	AGP3	P43548	558 aa		5.15	□□□□□ -1.59
SLD7	YOR060C	HCH1	P53834	153 aa		5.15	□□□□□ -1.59
SLD7	YOR060C	YML122C	Q03207	126 aa		5.15	□□□□□ -1.59
SLD7	YOR060C	MFG1	Q07684	458 aa		5.15	□□□□□ -1.59
SLD7	YOR060C	NDD1	Q08887	554 aa		5.15	□□□□□ -1.59
SLD7	YOR060C	HHF1	P02309	103 aa	Known RBP	5.14	□□□□□ -1.59
SLD7	YOR060C	CSE2	P33308	149 aa		5.14	□□□□□ -1.59
SLD7	YOR060C	HSM3	P38348	480 aa		5.14	□□□□□ -1.59
SLD7	YOR060C	RCK2	P38623	610 aa		5.14	□□□□□ -1.59
SLD7	YOR060C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
SLD7	YOR060C	PTI1	P39927	425 aa	Predicted RBP	5.14	□□□□□ -1.59
SLD7	YOR060C	MRX5	P47007	382 aa		5.14	□□□□□ -1.59
SLD7	YOR060C	CLD1	P53264	445 aa		5.14	□□□□□ -1.59
SLD7	YOR060C	SHY1	P53266	389 aa		5.14	□□□□□ -1.59
SLD7	YOR060C	YNL134C	P53912	376 aa	Known RBP	5.14	□□□□□ -1.59
SLD7	YOR060C	ELP3	Q02908	557 aa	Known RBP	5.14	□□□□□ -1.59
SLD7	YOR060C	YHC1	Q05900	231 aa	Known RBP	5.14	□□□□□ -1.59
SLD7	YOR060C	YLR012C	Q07927	99 aa		5.14	□□□□□ -1.59
SLD7	YOR060C	SSK22	P25390	1331 aa	Predicted RBP	5.14	□□□□□ -1.59
SLD7	YOR060C	ATP6	P00854	259 aa		5.13	□□□□□ -1.59
SLD7	YOR060C	IMP3	P32899	183 aa	Predicted RBP	5.13	□□□□□ -1.59
SLD7	YOR060C	SKG6	P32900	734 aa	Predicted RBP	5.13	□□□□□ -1.59
SLD7	YOR060C	YBL059W	P34224	193 aa		5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms