RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W KDX1P36005 433 aa3.64□□□□□ -1.83
PUB1YNL016W YKL162CP36052 402 aa3.64□□□□□ -1.83
PUB1YNL016W UTH1P36135 365 aa3.64□□□□□ -1.83
PUB1YNL016W PRS4P38063 326 aaPredicted RBP3.64□□□□□ -1.83
PUB1YNL016W RFC4P40339 323 aaKnown RBP3.64□□□□□ -1.83
PUB1YNL016W ASN1P49089 572 aaKnown RBP3.64□□□□□ -1.83
PUB1YNL016W UBP8P50102 471 aa3.64□□□□□ -1.83
PUB1YNL016W TAF6P53040 516 aa3.64□□□□□ -1.83
PUB1YNL016W YPR003CP53394 754 aa3.64□□□□□ -1.83
PUB1YNL016W YTP1P53584 459 aa3.64□□□□□ -1.83
PUB1YNL016W RTC4P53850 401 aa3.64□□□□□ -1.83
PUB1YNL016W AAT1Q01802 451 aa3.64□□□□□ -1.83
PUB1YNL016W ATG26Q06321 1198 aa3.64□□□□□ -1.83
PUB1YNL016W TIP41Q12199 356 aa3.64□□□□□ -1.83
PUB1YNL016W YPR1Q12458 312 aa3.64□□□□□ -1.83
PUB1YNL016W SUC2P00724 532 aa3.63□□□□□ -1.83
PUB1YNL016W DST1P07273 309 aa3.63□□□□□ -1.83
PUB1YNL016W IMA3P0CW40 589 aa3.63□□□□□ -1.83
PUB1YNL016W IMA4P0CW41 589 aa3.63□□□□□ -1.83
PUB1YNL016W ASP3-2P0CX77 362 aa3.63□□□□□ -1.83
PUB1YNL016W ASP3-3P0CX78 362 aa3.63□□□□□ -1.83
PUB1YNL016W ASP3-4P0CX79 362 aa3.63□□□□□ -1.83
PUB1YNL016W ASP3-1P0CZ17 362 aa3.63□□□□□ -1.83
PUB1YNL016W CKI1P20485 582 aa3.63□□□□□ -1.83
PUB1YNL016W CSM1P25651 190 aa3.63□□□□□ -1.83
PUB1YNL016W PPA2P28239 310 aa3.63□□□□□ -1.83
PUB1YNL016W CSE1P33307 960 aa3.63□□□□□ -1.83
PUB1YNL016W YPK3P38070 525 aa3.63□□□□□ -1.83
PUB1YNL016W SDS3P40505 327 aa3.63□□□□□ -1.83
PUB1YNL016W PMT6P42934 759 aa3.63□□□□□ -1.83
PUB1YNL016W HIT1P46973 164 aa3.63□□□□□ -1.83
PUB1YNL016W YJR154WP47181 346 aa3.63□□□□□ -1.83
PUB1YNL016W BIO4P53630 237 aa3.63□□□□□ -1.83
PUB1YNL016W RPM2Q02773 1202 aa3.63□□□□□ -1.83
PUB1YNL016W GIP3Q03016 1276 aa3.63□□□□□ -1.83
PUB1YNL016W PFA5Q03289 374 aa3.63□□□□□ -1.83
PUB1YNL016W PRM6Q04705 352 aa3.63□□□□□ -1.83
PUB1YNL016W GFD1Q04839 188 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W COQ11Q05892 277 aa3.63□□□□□ -1.83
PUB1YNL016W SDO1Q07953 250 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W YOL075CQ08234 1294 aa3.63□□□□□ -1.83
PUB1YNL016W IMA2Q08295 589 aa3.63□□□□□ -1.83
PUB1YNL016W TAF10Q12030 206 aa3.63□□□□□ -1.83
PUB1YNL016W SLF1Q12034 447 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W FRE7Q12333 620 aa3.63□□□□□ -1.83
PUB1YNL016W RGS2Q99188 309 aa3.63□□□□□ -1.83
PUB1YNL016W OPI3P05375 206 aa3.63□□□□□ -1.83
PUB1YNL016W RHO1P06780 209 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W CDC33P07260 213 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W FPR1P20081 114 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W NUP1P20676 1076 aa3.63□□□□□ -1.83
PUB1YNL016W RPL24BP24000 155 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W ADE1P27616 306 aa3.63□□□□□ -1.83
PUB1YNL016W GDH2P33327 1092 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W LDB7P38210 180 aa3.63□□□□□ -1.83
PUB1YNL016W MMS21P38632 267 aa3.63□□□□□ -1.83
PUB1YNL016W SMF2P38778 549 aa3.63□□□□□ -1.83
PUB1YNL016W BIG1P38813 335 aa3.63□□□□□ -1.83
PUB1YNL016W PFS1P38872 237 aa3.63□□□□□ -1.83
PUB1YNL016W YEL020CP39994 560 aa3.63□□□□□ -1.83
PUB1YNL016W YER079WP40052 210 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W DSE1P40077 573 aa3.63□□□□□ -1.83
PUB1YNL016W LYS12P40495 371 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W DSN1P40568 576 aa3.63□□□□□ -1.83
PUB1YNL016W TDA10P42938 290 aa3.63□□□□□ -1.83
PUB1YNL016W TRS85P46944 698 aa3.63□□□□□ -1.83
PUB1YNL016W MRX5P47007 382 aa3.63□□□□□ -1.83
PUB1YNL016W MRPL22P53881 309 aa3.63□□□□□ -1.83
PUB1YNL016W NUP116Q02630 1113 aa3.63□□□□□ -1.83
PUB1YNL016W YPL068CQ02749 293 aa3.63□□□□□ -1.83
PUB1YNL016W MMT1Q03218 510 aa3.63□□□□□ -1.83
PUB1YNL016W YMR209CQ03648 457 aa3.63□□□□□ -1.83
PUB1YNL016W YMR226CQ05016 267 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W RTT103Q05543 409 aa3.63□□□□□ -1.83
PUB1YNL016W CMS1Q07897 291 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W GPM2Q12008 311 aa3.63□□□□□ -1.83
PUB1YNL016W SIA1Q12212 622 aa3.63□□□□□ -1.83
PUB1YNL016W ATG34Q12292 412 aa3.63□□□□□ -1.83
PUB1YNL016W AHA1Q12449 350 aaKnown RBP3.63□□□□□ -1.83
PUB1YNL016W REV1P12689 985 aa3.62□□□□□ -1.83
PUB1YNL016W CKA2P19454 339 aa3.62□□□□□ -1.83
PUB1YNL016W RPO26P20435 155 aa3.62□□□□□ -1.83
PUB1YNL016W KIN3P22209 435 aa3.62□□□□□ -1.83
PUB1YNL016W CTR86P25355 563 aa3.62□□□□□ -1.83
PUB1YNL016W MXR2P25566 168 aa3.62□□□□□ -1.83
PUB1YNL016W FUN19P28003 413 aaPredicted RBP3.62□□□□□ -1.83
PUB1YNL016W PEX3P28795 441 aa3.62□□□□□ -1.83
PUB1YNL016W TOA2P32774 122 aa3.62□□□□□ -1.83
PUB1YNL016W VAM7P32912 316 aa3.62□□□□□ -1.83
PUB1YNL016W TKL2P33315 681 aa3.62□□□□□ -1.83
PUB1YNL016W DOA1P36037 715 aa3.62□□□□□ -1.83
PUB1YNL016W LEU5P38702 357 aa3.62□□□□□ -1.83
PUB1YNL016W ERG10P41338 398 aaKnown RBP3.62□□□□□ -1.83
PUB1YNL016W POP1P41812 875 aa3.62□□□□□ -1.83
PUB1YNL016W YRB1P41920 201 aaKnown RBP3.62□□□□□ -1.83
PUB1YNL016W COX16P47081 118 aa3.62□□□□□ -1.83
PUB1YNL016W YGR168CP53293 376 aa3.62□□□□□ -1.83
PUB1YNL016W BUD32P53323 261 aa3.62□□□□□ -1.83
PUB1YNL016W MRPL50P53724 139 aa3.62□□□□□ -1.83
PUB1YNL016W TRM112P53738 135 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms