RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W REC102Q02721 264 aa4.97□□□□□ -1.61
SPG4YMR107W SKY1Q03656 742 aa4.97□□□□□ -1.61
SPG4YMR107W CAC2Q04199 468 aa4.97□□□□□ -1.61
SPG4YMR107W SMA2Q04658 369 aa4.97□□□□□ -1.61
SPG4YMR107W PAL1Q05518 499 aaKnown RBP4.97□□□□□ -1.61
SPG4YMR107W DCR2Q05924 578 aa4.97□□□□□ -1.61
SPG4YMR107W APC5Q08683 685 aa4.97□□□□□ -1.61
SPG4YMR107W INP53Q12271 1107 aa4.97□□□□□ -1.61
SPG4YMR107W SFG1Q12507 346 aa4.97□□□□□ -1.61
SPG4YMR107W YGR161W-CQ3E744 92 aa4.97□□□□□ -1.61
SPG4YMR107W RAS2P01120 322 aaKnown RBP4.96□□□□□ -1.62
SPG4YMR107W RPL25P04456 142 aaKnown RBP4.96□□□□□ -1.62
SPG4YMR107W LEU4P06208 619 aaKnown RBP4.96□□□□□ -1.62
SPG4YMR107W RNA14P25298 677 aaKnown RBP4.96□□□□□ -1.62
SPG4YMR107W CDC50P25656 391 aa4.96□□□□□ -1.62
SPG4YMR107W YMC1P32331 307 aa4.96□□□□□ -1.62
SPG4YMR107W AAR2P32357 355 aaPredicted RBP4.96□□□□□ -1.62
SPG4YMR107W CDC12P32468 407 aaKnown RBP4.96□□□□□ -1.62
SPG4YMR107W CPR5P35176 225 aa4.96□□□□□ -1.62
SPG4YMR107W SFK1P35735 353 aa4.96□□□□□ -1.62
SPG4YMR107W SCO2P38072 301 aa4.96□□□□□ -1.62
SPG4YMR107W POL12P38121 705 aaPredicted RBP4.96□□□□□ -1.62
SPG4YMR107W ALG14P38242 237 aa4.96□□□□□ -1.62
SPG4YMR107W UBX7P38349 436 aa4.96□□□□□ -1.62
SPG4YMR107W PRS3P38689 320 aaKnown RBP4.96□□□□□ -1.62
SPG4YMR107W KSP1P38691 1029 aaKnown RBP4.96□□□□□ -1.62
SPG4YMR107W BNA6P43619 295 aa4.96□□□□□ -1.62
SPG4YMR107W DUS1P53759 423 aaKnown RBP4.96□□□□□ -1.62
SPG4YMR107W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
SPG4YMR107W KIN4Q01919 800 aa4.96□□□□□ -1.62
SPG4YMR107W GIP3Q03016 1276 aa4.96□□□□□ -1.62
SPG4YMR107W EST3Q03096 181 aa4.96□□□□□ -1.62
SPG4YMR107W YMR265CQ03508 461 aaKnown RBP4.96□□□□□ -1.62
SPG4YMR107W VBA1Q04301 562 aa4.96□□□□□ -1.62
SPG4YMR107W PLM2Q04383 521 aa4.96□□□□□ -1.62
SPG4YMR107W CRF1Q04930 467 aa4.96□□□□□ -1.62
SPG4YMR107W MRI1Q06489 411 aaKnown RBP4.96□□□□□ -1.62
SPG4YMR107W GPN3Q06543 272 aa4.96□□□□□ -1.62
SPG4YMR107W SDO1Q07953 250 aaKnown RBP4.96□□□□□ -1.62
SPG4YMR107W TMS1Q12116 473 aa4.96□□□□□ -1.62
SPG4YMR107W RPS31P05759 152 aaKnown RBP4.95□□□□□ -1.62
SPG4YMR107W MIS1P09440 975 aaKnown RBP4.95□□□□□ -1.62
SPG4YMR107W FRS1P15624 595 aaKnown RBP4.95□□□□□ -1.62
SPG4YMR107W YPK2P18961 677 aa4.95□□□□□ -1.62
SPG4YMR107W APN1P22936 367 aa4.95□□□□□ -1.62
SPG4YMR107W PRE4P30657 266 aa4.95□□□□□ -1.62
SPG4YMR107W MRPL9P31334 269 aa4.95□□□□□ -1.62
SPG4YMR107W CYS3P31373 394 aaKnown RBP4.95□□□□□ -1.62
SPG4YMR107W VMA5P31412 392 aaKnown RBP4.95□□□□□ -1.62
SPG4YMR107W SIP1P32578 815 aa4.95□□□□□ -1.62
SPG4YMR107W SUA5P32579 426 aa4.95□□□□□ -1.62
SPG4YMR107W ECT1P33412 323 aa4.95□□□□□ -1.62
SPG4YMR107W SPO23P33757 523 aa4.95□□□□□ -1.62
SPG4YMR107W TMA19P35691 167 aaKnown RBP4.95□□□□□ -1.62
SPG4YMR107W ATG8P38182 117 aaRIP-Chip data4.95□□□□□ -1.62not detected
SPG4YMR107W SHE1P38200 338 aa4.95□□□□□ -1.62
SPG4YMR107W COS111P38308 924 aa4.95□□□□□ -1.62
SPG4YMR107W OCA5P38738 679 aa4.95□□□□□ -1.62
SPG4YMR107W YHR122WP38829 231 aa4.95□□□□□ -1.62
SPG4YMR107W TAT2P38967 592 aa4.95□□□□□ -1.62
SPG4YMR107W PGD1P40356 397 aa4.95□□□□□ -1.62
SPG4YMR107W PAN6P40459 309 aa4.95□□□□□ -1.62
SPG4YMR107W PFA3P42836 336 aa4.95□□□□□ -1.62
SPG4YMR107W YGR201CP42936 225 aa4.95□□□□□ -1.62
SPG4YMR107W DPB11P47027 764 aaPredicted RBP4.95□□□□□ -1.62
SPG4YMR107W YJR111CP47148 283 aaKnown RBP4.95□□□□□ -1.62
SPG4YMR107W RPS7BP48164 190 aaKnown RBP4.95□□□□□ -1.62
SPG4YMR107W PHO23P50947 330 aa4.95□□□□□ -1.62
SPG4YMR107W SDT1P53078 280 aa4.95□□□□□ -1.62
SPG4YMR107W SWC4P53201 476 aa4.95□□□□□ -1.62
SPG4YMR107W YNL165WP53891 406 aa4.95□□□□□ -1.62
SPG4YMR107W IRC15Q02733 499 aa4.95□□□□□ -1.62
SPG4YMR107W ELP6Q04868 273 aa4.95□□□□□ -1.62
SPG4YMR107W RNH202Q05635 350 aa4.95□□□□□ -1.62
SPG4YMR107W SPO77Q06134 477 aa4.95□□□□□ -1.62
SPG4YMR107W YTM1Q12024 460 aaPredicted RBP4.95□□□□□ -1.62
SPG4YMR107W TIR4Q12218 487 aaPredicted RBP4.95□□□□□ -1.62
SPG4YMR107W PAA1Q12447 191 aaKnown RBP4.95□□□□□ -1.62
SPG4YMR107W MRX4Q12467 430 aa4.95□□□□□ -1.62
SPG4YMR107W AFI1Q99222 893 aa4.95□□□□□ -1.62
SPG4YMR107W CAR2P07991 424 aaKnown RBP4.94□□□□□ -1.62
SPG4YMR107W MER1P16523 270 aa4.94□□□□□ -1.62
SPG4YMR107W IFM1P25038 676 aa4.94□□□□□ -1.62
SPG4YMR107W POF1P25576 258 aa4.94□□□□□ -1.62
SPG4YMR107W ARE1P25628 610 aa4.94□□□□□ -1.62
SPG4YMR107W YUR1P26725 428 aa4.94□□□□□ -1.62
SPG4YMR107W ITR1P30605 584 aa4.94□□□□□ -1.62
SPG4YMR107W KRE6P32486 720 aa4.94□□□□□ -1.62
SPG4YMR107W SEC17P32602 292 aa4.94□□□□□ -1.62
SPG4YMR107W SUR1P33300 382 aa4.94□□□□□ -1.62
SPG4YMR107W LOT5P34234 306 aa4.94□□□□□ -1.62
SPG4YMR107W MTC2P34246 357 aa4.94□□□□□ -1.62
SPG4YMR107W TUL1P36096 758 aa4.94□□□□□ -1.62
SPG4YMR107W SDH4P37298 181 aa4.94□□□□□ -1.62
SPG4YMR107W APM3P38153 483 aa4.94□□□□□ -1.62
SPG4YMR107W COS8P38723 381 aa4.94□□□□□ -1.62
SPG4YMR107W EFM1P38732 585 aa4.94□□□□□ -1.62
SPG4YMR107W ALP1P38971 573 aa4.94□□□□□ -1.62
SPG4YMR107W SLM1P40485 686 aa4.94□□□□□ -1.62
SPG4YMR107W AGX1P43567 385 aa4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms