RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W LCB4Q12246 624 aa8.53□□□□□ -1.04
SFP1YLR403W TPO4Q12256 659 aa8.53□□□□□ -1.04
SFP1YLR403W YPR145C-AQ2V2P0 78 aa8.53□□□□□ -1.04
SFP1YLR403W TY1B-NL2Q99337 1749 aaKnown RBP8.53□□□□□ -1.04
SFP1YLR403W STE2D6VTK4 431 aa8.53□□□□□ -1.04
SFP1YLR403W AI1P03875 834 aa8.53□□□□□ -1.04
SFP1YLR403W CAN1P04817 590 aa8.53□□□□□ -1.04
SFP1YLR403W CSM1P25651 190 aa8.53□□□□□ -1.04
SFP1YLR403W ADE1P27616 306 aa8.53□□□□□ -1.04
SFP1YLR403W YPT53P36019 220 aa8.53□□□□□ -1.04
SFP1YLR403W ZTA1P38230 334 aaKnown RBP8.53□□□□□ -1.04
SFP1YLR403W RPF1P38805 295 aaKnown RBP8.53□□□□□ -1.04
SFP1YLR403W SFB3P38810 929 aa8.53□□□□□ -1.04
SFP1YLR403W SEC72P39742 193 aaKnown RBP8.53□□□□□ -1.04
SFP1YLR403W SMB1P40018 196 aaKnown RBP8.53□□□□□ -1.04
SFP1YLR403W GAT2P40209 560 aa8.53□□□□□ -1.04
SFP1YLR403W NUP57P48837 541 aa8.53□□□□□ -1.04
SFP1YLR403W YDR366CP87287 132 aa8.53□□□□□ -1.04
SFP1YLR403W YPL067CQ02754 198 aa8.53□□□□□ -1.04
SFP1YLR403W SNO1Q03144 224 aa8.53□□□□□ -1.04
SFP1YLR403W DIG2Q03373 323 aaKnown RBP8.53□□□□□ -1.04
SFP1YLR403W TDA1Q03533 586 aa8.53□□□□□ -1.04
SFP1YLR403W EKI1Q03764 534 aa8.53□□□□□ -1.04
SFP1YLR403W YLR225CQ05948 407 aaKnown RBP8.53□□□□□ -1.04
SFP1YLR403W NUT2Q06213 157 aa8.53□□□□□ -1.04
SFP1YLR403W TPO1Q07824 586 aa8.53□□□□□ -1.04
SFP1YLR403W YLR126CQ12288 251 aa8.53□□□□□ -1.04
SFP1YLR403W BCY1P07278 416 aaKnown RBP8.52□□□□□ -1.05
SFP1YLR403W HAP4P14064 554 aa8.52□□□□□ -1.05
SFP1YLR403W CBS1P14066 229 aa8.52□□□□□ -1.05
SFP1YLR403W ELO2P25358 347 aa8.52□□□□□ -1.05
SFP1YLR403W MUD1P32605 298 aaKnown RBP8.52□□□□□ -1.05
SFP1YLR403W END3P39013 349 aa8.52□□□□□ -1.05
SFP1YLR403W YER085CP40058 173 aa8.52□□□□□ -1.05
SFP1YLR403W COG3P40094 801 aa8.52□□□□□ -1.05
SFP1YLR403W YIL089WP40500 205 aa8.52□□□□□ -1.05
SFP1YLR403W NIT2P47016 307 aa8.52□□□□□ -1.05
SFP1YLR403W YGR126WP53274 230 aa8.52□□□□□ -1.05
SFP1YLR403W MAP1Q01662 387 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
SFP1YLR403W CRF1Q04930 467 aa8.52□□□□□ -1.05
SFP1YLR403W PUS5Q06244 254 aa8.52□□□□□ -1.05
SFP1YLR403W YPL066WQ12194 479 aa8.52□□□□□ -1.05
SFP1YLR403W RDL1Q12305 139 aaKnown RBP8.52□□□□□ -1.05
SFP1YLR403W MAG1P22134 296 aaKnown RBP8.52□□□□□ -1.05
SFP1YLR403W TUL1P36096 758 aa8.52□□□□□ -1.05
SFP1YLR403W YBR197CP38306 217 aa8.52□□□□□ -1.05
SFP1YLR403W VPS52P39904 641 aa8.52□□□□□ -1.05
SFP1YLR403W YIL067CP40514 678 aa8.52□□□□□ -1.05
SFP1YLR403W YAP1802P53309 568 aa8.52□□□□□ -1.05
SFP1YLR403W YPL077CQ02831 240 aa8.52□□□□□ -1.05
SFP1YLR403W MSC2Q03455 724 aa8.52□□□□□ -1.05
SFP1YLR403W MAK3Q03503 176 aa8.52□□□□□ -1.05
SFP1YLR403W RIM13Q03792 727 aa8.52□□□□□ -1.05
SFP1YLR403W CSM3Q04659 317 aa8.52□□□□□ -1.05
SFP1YLR403W PFK27Q12471 397 aaPredicted RBP8.52□□□□□ -1.05
SFP1YLR403W Q0142Q9ZZW4 58 aa8.52□□□□□ -1.05
SFP1YLR403W SPS2P08459 502 aa8.51□□□□□ -1.05
SFP1YLR403W APE1P14904 514 aa8.51□□□□□ -1.05
SFP1YLR403W PHO80P20052 293 aa8.51□□□□□ -1.05
SFP1YLR403W HOG1P32485 435 aa8.51□□□□□ -1.05
SFP1YLR403W SRB2P34162 210 aa8.51□□□□□ -1.05
SFP1YLR403W YPC1P38298 316 aa8.51□□□□□ -1.05
SFP1YLR403W AAD14P42884 376 aa8.51□□□□□ -1.05
SFP1YLR403W QRI7P43122 407 aa8.51□□□□□ -1.05
SFP1YLR403W MPA43P53583 542 aaPredicted RBP8.51□□□□□ -1.05
SFP1YLR403W ADI1Q03677 179 aa8.51□□□□□ -1.05
SFP1YLR403W LRS4Q04087 347 aaKnown RBP8.51□□□□□ -1.05
SFP1YLR403W AAD15Q08361 143 aa8.51□□□□□ -1.05
SFP1YLR403W TFC7Q12415 435 aa8.51□□□□□ -1.05
SFP1YLR403W VMA9Q3E7B6 73 aa8.51□□□□□ -1.05
SFP1YLR403W YIL177CP40434 1758 aa8.51□□□□□ -1.05
SFP1YLR403W YJL225CP40889 1758 aa8.51□□□□□ -1.05
SFP1YLR403W REV1P12689 985 aa8.5□□□□□ -1.05
SFP1YLR403W CKS1P20486 150 aaKnown RBP8.5□□□□□ -1.05
SFP1YLR403W STP22P25604 385 aa8.5□□□□□ -1.05
SFP1YLR403W CTP1P38152 299 aa8.5□□□□□ -1.05
SFP1YLR403W IPT1P38954 527 aa8.5□□□□□ -1.05
SFP1YLR403W YJL068CP40363 299 aa8.5□□□□□ -1.05
SFP1YLR403W SSY5P47002 699 aa8.5□□□□□ -1.05
SFP1YLR403W MEP3P53390 489 aa8.5□□□□□ -1.05
SFP1YLR403W ACT1P60010 375 aaKnown RBP8.5□□□□□ -1.05
SFP1YLR403W NUP116Q02630 1113 aa8.5□□□□□ -1.05
SFP1YLR403W GRX5Q02784 150 aa8.5□□□□□ -1.05
SFP1YLR403W TMN2Q04562 672 aa8.5□□□□□ -1.05
SFP1YLR403W ATG39Q06159 398 aa8.5□□□□□ -1.05
SFP1YLR403W TRM10Q12400 293 aa8.5□□□□□ -1.05
SFP1YLR403W SRF1Q12516 437 aa8.5□□□□□ -1.05
SFP1YLR403W YLR361C-AQ3E795 98 aa8.5□□□□□ -1.05
SFP1YLR403W RPB3P16370 318 aaKnown RBP8.5□□□□□ -1.05
SFP1YLR403W PRE4P30657 266 aa8.5□□□□□ -1.05
SFP1YLR403W PEX2P32800 271 aa8.5□□□□□ -1.05
SFP1YLR403W YKR051WP36142 418 aa8.5□□□□□ -1.05
SFP1YLR403W ATG8P38182 117 aaRIP-Chip data8.5□□□□□ -1.05not detected
SFP1YLR403W ARN1P38731 627 aa8.5□□□□□ -1.05
SFP1YLR403W PPE1P38796 400 aa8.5□□□□□ -1.05
SFP1YLR403W SLZ1P40167 298 aa8.5□□□□□ -1.05
SFP1YLR403W YMR144WP40214 342 aaKnown RBP8.5□□□□□ -1.05
SFP1YLR403W RRD1P40454 393 aaKnown RBP8.5□□□□□ -1.05
SFP1YLR403W YJL163CP46996 555 aa8.5□□□□□ -1.05
SFP1YLR403W ASN1P49089 572 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms