RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C NSA1P53136 463 aaPredicted RBP6.9□□□□□ -1.3
AFG2YLR397C ERV29P53337 310 aa6.9□□□□□ -1.3
AFG2YLR397C TRS31Q03337 283 aa6.9□□□□□ -1.3
AFG2YLR397C FRQ1Q06389 190 aa6.9□□□□□ -1.3
AFG2YLR397C MFG1Q07684 458 aa6.9□□□□□ -1.3
AFG2YLR397C YOP1Q12402 180 aa6.9□□□□□ -1.3
AFG2YLR397C YRF1-1P0CX20 1796 aa6.9□□□□□ -1.3
AFG2YLR397C YRF1-5P0CX21 1796 aa6.9□□□□□ -1.3
AFG2YLR397C YRF1-8P0CX22 1796 aa6.9□□□□□ -1.3
AFG2YLR397C COX2P00410 251 aa6.9□□□□□ -1.31
AFG2YLR397C HOP1P20050 605 aa6.9□□□□□ -1.31
AFG2YLR397C YCP4P25349 247 aaKnown RBP6.9□□□□□ -1.31
AFG2YLR397C STP22P25604 385 aa6.9□□□□□ -1.31
AFG2YLR397C IDH1P28834 360 aaKnown RBP RIP-Chip data6.9□□□□□ -1.31not detected
AFG2YLR397C EMP24P32803 203 aaKnown RBP6.9□□□□□ -1.31
AFG2YLR397C FMP23P38231 175 aa6.9□□□□□ -1.31
AFG2YLR397C YER188WP40103 239 aa6.9□□□□□ -1.31
AFG2YLR397C ELO3P40319 345 aa6.9□□□□□ -1.31
AFG2YLR397C YJL218WP40892 196 aaKnown RBP6.9□□□□□ -1.31
AFG2YLR397C MPA43P53583 542 aaPredicted RBP6.9□□□□□ -1.31
AFG2YLR397C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.9□□□□□ -1.31not detected
AFG2YLR397C BUD20Q08004 166 aaPredicted RBP6.9□□□□□ -1.31
AFG2YLR397C RRT8Q08219 342 aa6.9□□□□□ -1.31
AFG2YLR397C PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.9□□□□□ -1.31not detected
AFG2YLR397C YOL163WP0CF20 169 aa6.89□□□□□ -1.31
AFG2YLR397C GUK1P15454 187 aaKnown RBP6.89□□□□□ -1.31
AFG2YLR397C PEX4P29340 183 aa6.89□□□□□ -1.31
AFG2YLR397C SNC2P33328 115 aa6.89□□□□□ -1.31
AFG2YLR397C ADD66P36040 267 aa6.89□□□□□ -1.31
AFG2YLR397C MUP3P38734 546 aa6.89□□□□□ -1.31
AFG2YLR397C CKB2P38930 258 aa6.89□□□□□ -1.31
AFG2YLR397C KHA1P40309 873 aa6.89□□□□□ -1.31
AFG2YLR397C YIL108WP40483 696 aaKnown RBP6.89□□□□□ -1.31
AFG2YLR397C BAP3P41815 604 aa6.89□□□□□ -1.31
AFG2YLR397C YDL183CP48569 320 aa6.89□□□□□ -1.31
AFG2YLR397C SOL1P50278 321 aa6.89□□□□□ -1.31
AFG2YLR397C ALG12P53730 551 aa6.89□□□□□ -1.31
AFG2YLR397C CTK1Q03957 528 aaKnown RBP6.89□□□□□ -1.31
AFG2YLR397C AIM33Q04516 312 aa6.89□□□□□ -1.31
AFG2YLR397C GSF2Q04697 403 aaKnown RBP6.89□□□□□ -1.31
AFG2YLR397C CMR1Q12510 522 aaKnown RBP6.89□□□□□ -1.31
AFG2YLR397C SRF1Q12516 437 aa6.89□□□□□ -1.31
AFG2YLR397C YOL159C-AQ3E769 90 aa6.89□□□□□ -1.31
AFG2YLR397C AI4P03878 556 aa6.89□□□□□ -1.31
AFG2YLR397C RNR1P21524 888 aaKnown RBP6.89□□□□□ -1.31
AFG2YLR397C BUD5P25300 642 aaPredicted RBP6.89□□□□□ -1.31
AFG2YLR397C RER1P25560 188 aa6.89□□□□□ -1.31
AFG2YLR397C PRE4P30657 266 aa6.89□□□□□ -1.31
AFG2YLR397C SKG6P32900 734 aaPredicted RBP6.89□□□□□ -1.31
AFG2YLR397C LSB3P43603 459 aaKnown RBP6.89□□□□□ -1.31
AFG2YLR397C YHC3P47040 408 aa6.89□□□□□ -1.31
AFG2YLR397C YJR012CP47087 207 aa6.89□□□□□ -1.31
AFG2YLR397C ASN2P49090 572 aaKnown RBP6.89□□□□□ -1.31
AFG2YLR397C YDR366CP87287 132 aa6.89□□□□□ -1.31
AFG2YLR397C MSC3Q05812 728 aa6.89□□□□□ -1.31
AFG2YLR397C ECM30Q06673 1274 aa6.89□□□□□ -1.31
AFG2YLR397C YLR046CQ12253 270 aa6.89□□□□□ -1.31
AFG2YLR397C EFG1Q3E705 233 aaKnown RBP6.89□□□□□ -1.31
AFG2YLR397C GAL4P04386 881 aa6.88□□□□□ -1.31
AFG2YLR397C PPH21P23594 369 aa6.88□□□□□ -1.31
AFG2YLR397C ROT2P38138 954 aa6.88□□□□□ -1.31
AFG2YLR397C YBR197CP38306 217 aa6.88□□□□□ -1.31
AFG2YLR397C BUR6P40096 142 aa6.88□□□□□ -1.31
AFG2YLR397C PHO23P50947 330 aa6.88□□□□□ -1.31
AFG2YLR397C FLC3P53121 802 aa6.88□□□□□ -1.31
AFG2YLR397C MEP3P53390 489 aa6.88□□□□□ -1.31
AFG2YLR397C UPS3Q04006 179 aa6.88□□□□□ -1.31
AFG2YLR397C YLR225CQ05948 407 aaKnown RBP6.88□□□□□ -1.31
AFG2YLR397C AIM6Q07716 390 aa6.88□□□□□ -1.31
AFG2YLR397C TEN1Q07921 160 aa6.88□□□□□ -1.31
AFG2YLR397C FDH1Q08911 376 aa6.88□□□□□ -1.31
AFG2YLR397C YAH1Q12184 172 aaKnown RBP6.88□□□□□ -1.31
AFG2YLR397C JLP1Q12358 412 aa6.88□□□□□ -1.31
AFG2YLR397C MEX67Q99257 599 aaKnown RBP6.88□□□□□ -1.31
AFG2YLR397C CBP1P07252 654 aa6.88□□□□□ -1.31
AFG2YLR397C CDC34P14682 295 aa6.88□□□□□ -1.31
AFG2YLR397C NUP1P20676 1076 aa6.88□□□□□ -1.31
AFG2YLR397C BUD31P25337 157 aaPredicted RBP6.88□□□□□ -1.31
AFG2YLR397C TAH1P25638 111 aaPredicted RBP6.88□□□□□ -1.31
AFG2YLR397C MGE1P38523 228 aa6.88□□□□□ -1.31
AFG2YLR397C IRC7P43623 340 aa6.88□□□□□ -1.31
AFG2YLR397C CSN12P47130 423 aa6.88□□□□□ -1.31
AFG2YLR397C MDM34P53083 459 aa6.88□□□□□ -1.31
AFG2YLR397C YGL114WP53134 725 aa6.88□□□□□ -1.31
AFG2YLR397C TNA1P53322 534 aa6.88□□□□□ -1.31
AFG2YLR397C SSU72P53538 206 aaPredicted RBP6.88□□□□□ -1.31
AFG2YLR397C FPK1P53739 893 aa6.88□□□□□ -1.31
AFG2YLR397C RHO3Q00245 231 aaKnown RBP6.88□□□□□ -1.31
AFG2YLR397C NUP116Q02630 1113 aa6.88□□□□□ -1.31
AFG2YLR397C CTL1Q03220 320 aaKnown RBP6.88□□□□□ -1.31
AFG2YLR397C YDR391CQ04170 232 aa6.88□□□□□ -1.31
AFG2YLR397C MRPL35Q06678 367 aa6.88□□□□□ -1.31
AFG2YLR397C AIM39Q08223 395 aa6.88□□□□□ -1.31
AFG2YLR397C SNF5P18480 905 aa6.87□□□□□ -1.31
AFG2YLR397C IDP1P21954 428 aaKnown RBP6.87□□□□□ -1.31
AFG2YLR397C MIG1P27705 504 aa6.87□□□□□ -1.31
AFG2YLR397C YKL151CP36059 337 aa6.87□□□□□ -1.31
AFG2YLR397C SDH4P37298 181 aa6.87□□□□□ -1.31
AFG2YLR397C PHO90P39535 881 aa6.87□□□□□ -1.31
AFG2YLR397C OPT1P40897 799 aa6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms