RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	VPS73	P53142	486 aa	Known RBP	14.08	□□□□□ -0.16
CCC1	YLR220W	RBG2	P53295	368 aa	Known RBP	14.08	□□□□□ -0.16
CCC1	YLR220W	COS1	P53822	381 aa		14.08	□□□□□ -0.16
CCC1	YLR220W	HXT11	P54862	567 aa		14.08	□□□□□ -0.16
CCC1	YLR220W	SNT309	Q06091	175 aa	Predicted RBP	14.08	□□□□□ -0.16
CCC1	YLR220W	YKL077W	P36081	392 aa		14.07	□□□□□ -0.16
CCC1	YLR220W	MPH1	P40562	993 aa		14.07	□□□□□ -0.16
CCC1	YLR220W	YJR098C	P47139	656 aa		14.07	□□□□□ -0.16
CCC1	YLR220W	PGU1	P47180	361 aa		14.07	□□□□□ -0.16
CCC1	YLR220W	MON1	P53129	644 aa		14.07	□□□□□ -0.16
CCC1	YLR220W	SLD3	P53135	668 aa		14.07	□□□□□ -0.16
CCC1	YLR220W	BUR2	Q05949	395 aa		14.07	□□□□□ -0.16
CCC1	YLR220W	SPC3	Q12133	184 aa		14.07	□□□□□ -0.16
CCC1	YLR220W	MDM32	Q12171	622 aa		14.07	□□□□□ -0.16
CCC1	YLR220W	HAP4	P14064	554 aa		14.06	□□□□□ -0.16
CCC1	YLR220W	SNF6	P18888	332 aa		14.06	□□□□□ -0.16
CCC1	YLR220W	DHR2	P36009	735 aa	Predicted RBP	14.06	□□□□□ -0.16
CCC1	YLR220W	YBR138C	P38277	524 aa		14.06	□□□□□ -0.16
CCC1	YLR220W	YLF2	P38746	405 aa		14.06	□□□□□ -0.16
CCC1	YLR220W	YGL101W	P53144	215 aa		14.06	□□□□□ -0.16
CCC1	YLR220W	BUD9	P53226	547 aa		14.06	□□□□□ -0.16
CCC1	YLR220W	YMD8	Q03697	442 aa		14.06	□□□□□ -0.16
CCC1	YLR220W	YDR249C	Q03787	373 aa		14.06	□□□□□ -0.16
CCC1	YLR220W	YLR345W	Q06137	509 aa		14.06	□□□□□ -0.16
CCC1	YLR220W	YDL109C	Q12103	647 aa		14.06	□□□□□ -0.16
CCC1	YLR220W	ERG8	P24521	451 aa		14.05	□□□□□ -0.16
CCC1	YLR220W	EHD3	P28817	500 aa		14.05	□□□□□ -0.16
CCC1	YLR220W	PUP2	P32379	260 aa		14.05	□□□□□ -0.16
CCC1	YLR220W	MDL1	P33310	695 aa		14.05	□□□□□ -0.16
CCC1	YLR220W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	14.05	□□□□□ -0.16	not detected
CCC1	YLR220W	MSS2	P40990	351 aa		14.05	□□□□□ -0.16
CCC1	YLR220W	SWP82	P43554	623 aa		14.05	□□□□□ -0.16
CCC1	YLR220W	SUR7	P54003	302 aa		14.05	□□□□□ -0.16
CCC1	YLR220W	TLG1	Q03322	224 aa		14.05	□□□□□ -0.16
CCC1	YLR220W	ELP6	Q04868	273 aa		14.05	□□□□□ -0.16
CCC1	YLR220W	CDA2	Q06703	312 aa		14.05	□□□□□ -0.16
CCC1	YLR220W	PST2	Q12335	198 aa	Known RBP	14.05	□□□□□ -0.16
CCC1	YLR220W	CYT1	P07143	309 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	SAM35	P14693	329 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	YPK2	P18961	677 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	ADH7	P25377	361 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	OAC1	P32332	324 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	NUD1	P32336	851 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	TRS65	P32893	560 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	MAE1	P36013	669 aa	Known RBP	14.04	□□□□□ -0.16
CCC1	YLR220W	GPX1	P36014	167 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	TPO5	P36029	618 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	KAE1	P36132	386 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	RPP1	P38786	293 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	RIO2	P40160	425 aa	Known RBP	14.04	□□□□□ -0.16
CCC1	YLR220W	QRI7	P43122	407 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	SHE4	P51534	789 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	YRA1	Q12159	226 aa	Known RBP	14.04	□□□□□ -0.16
CCC1	YLR220W	SIA1	Q12212	622 aa		14.04	□□□□□ -0.16
CCC1	YLR220W	DBP10	Q12389	995 aa	Known RBP	14.04	□□□□□ -0.16
CCC1	YLR220W	HSP30	P25619	332 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	JEN1	P36035	616 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	MOH1	P38191	138 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	IPT1	P38954	527 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	ECO1	P43605	281 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	MDE1	P47095	244 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	ECL1	P48235	211 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	MPP6	P53725	186 aa	Predicted RBP	14.03	□□□□□ -0.16
CCC1	YLR220W	ATG4	P53867	494 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	GIS1	Q03833	894 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	UTP21	Q06078	939 aa	Predicted RBP	14.03	□□□□□ -0.16
CCC1	YLR220W	UIP4	Q08926	304 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	TMS1	Q12116	473 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	SET6	Q12529	373 aa		14.03	□□□□□ -0.16
CCC1	YLR220W	VPH2	P32341	215 aa		14.02	□□□□□ -0.17
CCC1	YLR220W	MSN4	P33749	630 aa		14.02	□□□□□ -0.17
CCC1	YLR220W	ARN2	P38724	620 aa		14.02	□□□□□ -0.17
CCC1	YLR220W	GOS1	P38736	223 aa		14.02	□□□□□ -0.17
CCC1	YLR220W	STB1	P42845	420 aa		14.02	□□□□□ -0.17
CCC1	YLR220W	YNR062C	P53748	327 aa		14.02	□□□□□ -0.17
CCC1	YLR220W	RNH1	Q04740	348 aa		14.02	□□□□□ -0.17
CCC1	YLR220W	YPR109W	Q06104	294 aa		14.02	□□□□□ -0.17
CCC1	YLR220W	RLM1	Q12224	676 aa		14.02	□□□□□ -0.17
CCC1	YLR220W	YDL007C-A	Q2V2Q0	85 aa		14.02	□□□□□ -0.17
CCC1	YLR220W	MED11	Q99278	115 aa		14.02	□□□□□ -0.17
CCC1	YLR220W	YBR056W-A	I2HB52	66 aa		14.01	□□□□□ -0.17
CCC1	YLR220W	SCO1	P23833	295 aa		14.01	□□□□□ -0.17
CCC1	YLR220W	RAD51	P25454	400 aa		14.01	□□□□□ -0.17
CCC1	YLR220W	SLC1	P33333	303 aa		14.01	□□□□□ -0.17
CCC1	YLR220W	HIS7	P33734	552 aa	Known RBP	14.01	□□□□□ -0.17
CCC1	YLR220W	YHR180W	P38868	163 aa		14.01	□□□□□ -0.17
CCC1	YLR220W	SNX41	Q04053	625 aa		14.01	□□□□□ -0.17
CCC1	YLR220W	COQ10	Q08058	207 aa		14.01	□□□□□ -0.17
CCC1	YLR220W	NTG2	Q08214	380 aa		14.01	□□□□□ -0.17
CCC1	YLR220W	RDR1	Q08904	546 aa		14.01	□□□□□ -0.17
CCC1	YLR220W	TRM10	Q12400	293 aa		14.01	□□□□□ -0.17
CCC1	YLR220W	CUP1-1	P0CX80	61 aa		14	□□□□□ -0.17
CCC1	YLR220W	CUP1-2	P0CX81	61 aa		14	□□□□□ -0.17
CCC1	YLR220W	YHR214C-D	P0CX93	97 aa		14	□□□□□ -0.17
CCC1	YLR220W	NIC96	P34077	839 aa		14	□□□□□ -0.17
CCC1	YLR220W	YKL071W	P36086	256 aa		14	□□□□□ -0.17
CCC1	YLR220W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	14	□□□□□ -0.17	not detected
CCC1	YLR220W	RET2	P43621	546 aa		14	□□□□□ -0.17
CCC1	YLR220W	PBP1	P53297	722 aa	Known RBP	14	□□□□□ -0.17
CCC1	YLR220W	DML1	Q03652	475 aa		14	□□□□□ -0.17

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms