RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W SKN7P38889 622 aa9.1□□□□□ -0.95
SHH4YLR164W OCA1P50946 238 aaPredicted RBP9.1□□□□□ -0.95
SHH4YLR164W YGL235WP53071 178 aa9.1□□□□□ -0.95
SHH4YLR164W YNR062CP53748 327 aa9.1□□□□□ -0.95
SHH4YLR164W ATG21Q02887 496 aa9.1□□□□□ -0.95
SHH4YLR164W SEC13Q04491 297 aaKnown RBP9.1□□□□□ -0.95
SHH4YLR164W ERB1Q04660 807 aaKnown RBP9.1□□□□□ -0.95
SHH4YLR164W YLR446WQ06204 433 aa9.1□□□□□ -0.95
SHH4YLR164W UIP4Q08926 304 aa9.1□□□□□ -0.95
SHH4YLR164W TAL1P15019 335 aaKnown RBP9.09□□□□□ -0.95
SHH4YLR164W BAP2P38084 609 aa9.09□□□□□ -0.95
SHH4YLR164W RIX1P38883 763 aaPredicted RBP9.09□□□□□ -0.95
SHH4YLR164W AIM10P39965 576 aaKnown RBP9.09□□□□□ -0.95
SHH4YLR164W SHR5P41912 237 aa9.09□□□□□ -0.95
SHH4YLR164W STB1P42845 420 aa9.09□□□□□ -0.95
SHH4YLR164W EFM3P47163 339 aa9.09□□□□□ -0.95
SHH4YLR164W LSG1P53145 640 aaKnown RBP9.09□□□□□ -0.95
SHH4YLR164W NUP49Q02199 472 aa9.09□□□□□ -0.95
SHH4YLR164W PRP3Q03338 469 aaPredicted RBP9.09□□□□□ -0.95
SHH4YLR164W EKI1Q03764 534 aa9.09□□□□□ -0.95
SHH4YLR164W RNH1Q04740 348 aa9.09□□□□□ -0.95
SHH4YLR164W MDM30Q05930 598 aa9.09□□□□□ -0.95
SHH4YLR164W SYO1Q07395 620 aa9.09□□□□□ -0.95
SHH4YLR164W FMP45Q07651 309 aa9.09□□□□□ -0.95
SHH4YLR164W NOP12Q08208 459 aaKnown RBP9.09□□□□□ -0.95
SHH4YLR164W AVO1Q08236 1176 aa9.09□□□□□ -0.95
SHH4YLR164W YOR376WQ08900 122 aa9.09□□□□□ -0.95
SHH4YLR164W REX3Q12090 404 aa9.09□□□□□ -0.95
SHH4YLR164W DPM1P14020 267 aaKnown RBP9.08□□□□□ -0.96
SHH4YLR164W IDP1P21954 428 aaKnown RBP9.08□□□□□ -0.96
SHH4YLR164W NAR1P23503 491 aaKnown RBP9.08□□□□□ -0.96
SHH4YLR164W SBA1P28707 216 aaKnown RBP9.08□□□□□ -0.96
SHH4YLR164W YEF1P32622 495 aa9.08□□□□□ -0.96
SHH4YLR164W MTC4P38335 694 aaKnown RBP9.08□□□□□ -0.96
SHH4YLR164W IRC7P43623 340 aa9.08□□□□□ -0.96
SHH4YLR164W PGA1P53896 198 aa9.08□□□□□ -0.96
SHH4YLR164W ARP10Q04549 284 aa9.08□□□□□ -0.96
SHH4YLR164W VID22Q05934 901 aa9.08□□□□□ -0.96
SHH4YLR164W AKR2Q12013 749 aa9.08□□□□□ -0.96
SHH4YLR164W PNS1Q12412 539 aa9.08□□□□□ -0.96
SHH4YLR164W PAR32Q12515 295 aaKnown RBP9.08□□□□□ -0.96
SHH4YLR164W YPT1P01123 206 aaKnown RBP9.07□□□□□ -0.96
SHH4YLR164W HSP30P25619 332 aa9.07□□□□□ -0.96
SHH4YLR164W RPL5P26321 297 aaKnown RBP9.07□□□□□ -0.96
SHH4YLR164W RPS5P26783 225 aaKnown RBP9.07□□□□□ -0.96
SHH4YLR164W PRE2P30656 287 aaKnown RBP9.07□□□□□ -0.96
SHH4YLR164W LST4P34239 828 aa9.07□□□□□ -0.96
SHH4YLR164W OM14P38325 134 aa9.07□□□□□ -0.96
SHH4YLR164W RPS20P38701 121 aaKnown RBP9.07□□□□□ -0.96
SHH4YLR164W ARN2P38724 620 aa9.07□□□□□ -0.96
SHH4YLR164W CHL4P38907 458 aa9.07□□□□□ -0.96
SHH4YLR164W HRB1P38922 454 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
SHH4YLR164W HXT9P40885 567 aa9.07□□□□□ -0.96
SHH4YLR164W HXT11P54862 567 aa9.07□□□□□ -0.96
SHH4YLR164W DML1Q03652 475 aa9.07□□□□□ -0.96
SHH4YLR164W YPR127WQ06494 345 aa9.07□□□□□ -0.96
SHH4YLR164W RDR1Q08904 546 aa9.07□□□□□ -0.96
SHH4YLR164W BTS1Q12051 335 aa9.07□□□□□ -0.96
SHH4YLR164W YDL177CQ12257 170 aa9.07□□□□□ -0.96
SHH4YLR164W HSP42Q12329 375 aa9.07□□□□□ -0.96
SHH4YLR164W IES3Q12345 250 aa9.07□□□□□ -0.96
SHH4YLR164W YCL002CP25565 263 aa9.06□□□□□ -0.96
SHH4YLR164W ARO7P32178 256 aa9.06□□□□□ -0.96
SHH4YLR164W ALG3P38179 458 aa9.06□□□□□ -0.96
SHH4YLR164W YIL166CP40445 542 aa9.06□□□□□ -0.96
SHH4YLR164W IKS1P47042 667 aa9.06□□□□□ -0.96
SHH4YLR164W BUD17P53727 317 aa9.06□□□□□ -0.96
SHH4YLR164W RHO5P53879 331 aaKnown RBP9.06□□□□□ -0.96
SHH4YLR164W MAK3Q03503 176 aa9.06□□□□□ -0.96
SHH4YLR164W YMR087WQ04299 284 aa9.06□□□□□ -0.96
SHH4YLR164W YPS7Q06325 596 aa9.06□□□□□ -0.96
SHH4YLR164W HDA2Q06629 674 aa9.06□□□□□ -0.96
SHH4YLR164W MCM21Q06675 368 aa9.06□□□□□ -0.96
SHH4YLR164W HRT1Q08273 121 aa9.06□□□□□ -0.96
SHH4YLR164W ENB1Q08299 606 aa9.06□□□□□ -0.96
SHH4YLR164W RAX1Q08760 435 aa9.06□□□□□ -0.96
SHH4YLR164W RRG7Q08774 242 aaPredicted RBP9.06□□□□□ -0.96
SHH4YLR164W MCP1Q12106 302 aa9.06□□□□□ -0.96
SHH4YLR164W YRA1Q12159 226 aaKnown RBP9.06□□□□□ -0.96
SHH4YLR164W RBD2Q12270 262 aa9.06□□□□□ -0.96
SHH4YLR164W HER1Q12276 1246 aa9.06□□□□□ -0.96
SHH4YLR164W IRA1P18963 3092 aa9.06□□□□□ -0.96
SHH4YLR164W RPB8P20436 146 aa9.05□□□□□ -0.96
SHH4YLR164W DPB2P24482 689 aaPredicted RBP9.05□□□□□ -0.96
SHH4YLR164W SNC1P31109 117 aa9.05□□□□□ -0.96
SHH4YLR164W JEN1P36035 616 aa9.05□□□□□ -0.96
SHH4YLR164W NAS2P40555 220 aa9.05□□□□□ -0.96
SHH4YLR164W IRC5P43610 853 aa9.05□□□□□ -0.96
SHH4YLR164W SSY5P47002 699 aa9.05□□□□□ -0.96
SHH4YLR164W SCW11P53189 542 aa9.05□□□□□ -0.96
SHH4YLR164W GIS1Q03833 894 aa9.05□□□□□ -0.96
SHH4YLR164W FIN1Q03898 291 aa9.05□□□□□ -0.96
SHH4YLR164W SNX41Q04053 625 aa9.05□□□□□ -0.96
SHH4YLR164W SNO4Q04902 237 aa9.05□□□□□ -0.96
SHH4YLR164W FMP42Q04991 504 aa9.05□□□□□ -0.96
SHH4YLR164W RSA3Q05942 220 aaKnown RBP9.05□□□□□ -0.96
SHH4YLR164W SNT309Q06091 175 aaPredicted RBP9.05□□□□□ -0.96
SHH4YLR164W YLR040CQ07988 224 aa9.05□□□□□ -0.96
SHH4YLR164W HSP33Q08914 237 aaKnown RBP9.05□□□□□ -0.96
SHH4YLR164W RKM1Q08961 583 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms