RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C CLB2P24869 491 aa3.77□□□□□ -1.81
SRP40YKR092C CHA1P25379 360 aaKnown RBP3.77□□□□□ -1.81
SRP40YKR092C YCL068CP25593 260 aa3.77□□□□□ -1.81
SRP40YKR092C PPA2P28239 310 aa3.77□□□□□ -1.81
SRP40YKR092C PTK1P36002 662 aaPredicted RBP3.77□□□□□ -1.81
SRP40YKR092C AGP2P38090 596 aa3.77□□□□□ -1.81
SRP40YKR092C DTR1P38125 572 aa3.77□□□□□ -1.81
SRP40YKR092C SHE3P38272 425 aaKnown RBP3.77□□□□□ -1.81
SRP40YKR092C UBA4P38820 440 aa3.77□□□□□ -1.81
SRP40YKR092C FAR7P43592 221 aa3.77□□□□□ -1.81
SRP40YKR092C RPA34P47006 233 aaPredicted RBP3.77□□□□□ -1.81
SRP40YKR092C PET130P47065 347 aa3.77□□□□□ -1.81
SRP40YKR092C SEH1P53011 349 aaKnown RBP3.77□□□□□ -1.81
SRP40YKR092C COG1P53079 417 aa3.77□□□□□ -1.81
SRP40YKR092C ZRG17P53735 605 aa3.77□□□□□ -1.81
SRP40YKR092C DYN2Q02647 92 aa3.77□□□□□ -1.81
SRP40YKR092C ENT5Q03769 411 aaKnown RBP3.77□□□□□ -1.81
SRP40YKR092C RIM13Q03792 727 aa3.77□□□□□ -1.81
SRP40YKR092C CSM3Q04659 317 aa3.77□□□□□ -1.81
SRP40YKR092C SOV1Q04748 898 aa3.77□□□□□ -1.81
SRP40YKR092C RQC1Q05468 723 aaKnown RBP3.77□□□□□ -1.81
SRP40YKR092C GLO2Q05584 274 aa3.77□□□□□ -1.81
SRP40YKR092C ECM30Q06673 1274 aa3.77□□□□□ -1.81
SRP40YKR092C YET3Q07451 203 aa3.77□□□□□ -1.81
SRP40YKR092C RFU1Q08003 200 aa3.77□□□□□ -1.81
SRP40YKR092C TAF10Q12030 206 aa3.77□□□□□ -1.81
SRP40YKR092C RCN2Q12044 265 aa3.77□□□□□ -1.81
SRP40YKR092C APC9Q12107 265 aa3.77□□□□□ -1.81
SRP40YKR092C YPR022CQ12139 1133 aa3.77□□□□□ -1.81
SRP40YKR092C NBP2Q12163 236 aa3.77□□□□□ -1.81
SRP40YKR092C FRE7Q12333 620 aa3.77□□□□□ -1.81
SRP40YKR092C PAA1Q12447 191 aaKnown RBP3.77□□□□□ -1.81
SRP40YKR092C CTF3Q12748 733 aa3.77□□□□□ -1.81
SRP40YKR092C EFG1Q3E705 233 aaKnown RBP3.77□□□□□ -1.81
SRP40YKR092C AI5_BETAQ9ZZX0 354 aa3.77□□□□□ -1.81
SRP40YKR092C CDC28P00546 298 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C CMD1P06787 147 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C YML003WP0CF16 290 aa3.76□□□□□ -1.81
SRP40YKR092C MATALPHA1P0CY06 175 aa3.76□□□□□ -1.81
SRP40YKR092C HMLALPHA1P0CY07 175 aa3.76□□□□□ -1.81
SRP40YKR092C REV1P12689 985 aa3.76□□□□□ -1.81
SRP40YKR092C PEP5P12868 1029 aa3.76□□□□□ -1.81
SRP40YKR092C UGA1P17649 471 aa3.76□□□□□ -1.81
SRP40YKR092C URE2P23202 354 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C YCP4P25349 247 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C LRE1P25579 583 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C RFA2P26754 273 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C GCG1P32656 232 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C GSP1P32835 219 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C GSP2P32836 220 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C RPS1AP33442 255 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C CLG1P35190 452 aa3.76□□□□□ -1.81
SRP40YKR092C DOA1P36037 715 aa3.76□□□□□ -1.81
SRP40YKR092C FET3P38993 636 aa3.76□□□□□ -1.81
SRP40YKR092C PRP39P39682 629 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C BUR6P40096 142 aa3.76□□□□□ -1.81
SRP40YKR092C SER33P40510 469 aa3.76□□□□□ -1.81
SRP40YKR092C YGR201CP42936 225 aa3.76□□□□□ -1.81
SRP40YKR092C CAK1P43568 368 aaPredicted RBP3.76□□□□□ -1.81
SRP40YKR092C ARC1P46672 376 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C YJR111CP47148 283 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C MSY1P48527 492 aa3.76□□□□□ -1.81
SRP40YKR092C NAS6P50086 228 aa3.76□□□□□ -1.81
SRP40YKR092C ORC5P50874 479 aa3.76□□□□□ -1.81
SRP40YKR092C RMD9P53140 646 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C DBP6P53734 629 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C PRP38Q00723 242 aaPredicted RBP3.76□□□□□ -1.81
SRP40YKR092C YDR476CQ03362 224 aa3.76□□□□□ -1.81
SRP40YKR092C SNU56Q03782 492 aaKnown RBP3.76□□□□□ -1.81
SRP40YKR092C PPM1Q04081 328 aa3.76□□□□□ -1.81
SRP40YKR092C APC4Q04601 652 aa3.76□□□□□ -1.81
SRP40YKR092C FRQ1Q06389 190 aa3.76□□□□□ -1.81
SRP40YKR092C MHR1Q06630 226 aa3.76□□□□□ -1.81
SRP40YKR092C SKI7Q08491 747 aaPredicted RBP3.76□□□□□ -1.81
SRP40YKR092C BAG7Q12128 409 aa3.76□□□□□ -1.81
SRP40YKR092C NMD4Q12129 218 aa3.76□□□□□ -1.81
SRP40YKR092C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81 RIP-Chip
SRP40YKR092C YLR111WQ12528 110 aa3.76□□□□□ -1.81
SRP40YKR092C RGS2Q99188 309 aa3.76□□□□□ -1.81
SRP40YKR092C VPS63O13549 108 aa3.75□□□□□ -1.81
SRP40YKR092C QCR7P00128 127 aa3.75□□□□□ -1.81
SRP40YKR092C TY2A-LR1P0C2J4 438 aa3.75□□□□□ -1.81
SRP40YKR092C TY2A-FP0CX61 438 aa3.75□□□□□ -1.81
SRP40YKR092C TY2A-GR2P0CX62 438 aa3.75□□□□□ -1.81
SRP40YKR092C ZWF1P11412 505 aaKnown RBP3.75□□□□□ -1.81
SRP40YKR092C SCH9P11792 824 aaKnown RBP3.75□□□□□ -1.81
SRP40YKR092C SAR1P20606 190 aaKnown RBP3.75□□□□□ -1.81
SRP40YKR092C CNA1P23287 553 aa3.75□□□□□ -1.81
SRP40YKR092C TY2A-CP25383 438 aa3.75□□□□□ -1.81
SRP40YKR092C ATG22P25568 528 aa3.75□□□□□ -1.81
SRP40YKR092C PMT2P31382 759 aa3.75□□□□□ -1.81
SRP40YKR092C UPS2P35200 230 aa3.75□□□□□ -1.81
SRP40YKR092C YCR087C-AP37263 153 aa3.75□□□□□ -1.81
SRP40YKR092C ECM8P38246 354 aa3.75□□□□□ -1.81
SRP40YKR092C AIM18P38884 321 aa3.75□□□□□ -1.81
SRP40YKR092C CSM2P40465 213 aa3.75□□□□□ -1.81
SRP40YKR092C POG1P40473 351 aa3.75□□□□□ -1.81
SRP40YKR092C XBP1P40489 647 aa3.75□□□□□ -1.81
SRP40YKR092C IST3P40565 148 aaPredicted RBP3.75□□□□□ -1.81
SRP40YKR092C MET28P40573 187 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms