RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeast

Gene RPL39, Length 156 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL39	YJL189W	RRI2	Q12348	645 aa		0.7	□□□□□ -2.3
RPL39	YJL189W	BYE1	P36106	594 aa		0.69	□□□□□ -2.3
RPL39	YJL189W	LSM5	P40089	93 aa	Known RBP	0.69	□□□□□ -2.3
RPL39	YJL189W	EFM3	P47163	339 aa		0.69	□□□□□ -2.3
RPL39	YJL189W	DFM1	Q12743	341 aa	Known RBP	0.69	□□□□□ -2.3
RPL39	YJL189W	SSE1	P32589	693 aa	Known RBP	0.68	□□□□□ -2.3
RPL39	YJL189W	YCH1	P42937	148 aa		0.68	□□□□□ -2.3
RPL39	YJL189W	MOB2	P43563	287 aa		0.68	□□□□□ -2.3
RPL39	YJL189W	CAX4	P53223	239 aa		0.68	□□□□□ -2.3
RPL39	YJL189W	SUR7	P54003	302 aa		0.68	□□□□□ -2.3
RPL39	YJL189W	YPL264C	Q08980	353 aa		0.68	□□□□□ -2.3
RPL39	YJL189W	DET1	Q99288	334 aa	Known RBP	0.68	□□□□□ -2.3
RPL39	YJL189W	MRPL20	P22354	195 aa	Predicted RBP	0.67	□□□□□ -2.3
RPL39	YJL189W	ADK2	P26364	225 aa		0.67	□□□□□ -2.3
RPL39	YJL189W	RCK1	P38622	512 aa		0.67	□□□□□ -2.3
RPL39	YJL189W	YHR177W	P38867	453 aa		0.67	□□□□□ -2.3
RPL39	YJL189W	ASP1	P38986	381 aa	Predicted RBP	0.67	□□□□□ -2.3
RPL39	YJL189W	RRG9	P40156	214 aa		0.67	□□□□□ -2.3
RPL39	YJL189W	TCB2	P48231	1178 aa		0.67	□□□□□ -2.3
RPL39	YJL189W	TRM82	Q03774	444 aa		0.67	□□□□□ -2.3
RPL39	YJL189W	YDR114C	Q04597	100 aa		0.67	□□□□□ -2.3
RPL39	YJL189W	ERB1	Q04660	807 aa	Known RBP	0.67	□□□□□ -2.3
RPL39	YJL189W	YLR287C	Q05881	355 aa		0.67	□□□□□ -2.3
RPL39	YJL189W	ARO4	P32449	370 aa	Known RBP	0.66	□□□□□ -2.3
RPL39	YJL189W	PAC11	P40960	533 aa		0.66	□□□□□ -2.3
RPL39	YJL189W	ECO1	P43605	281 aa		0.66	□□□□□ -2.3
RPL39	YJL189W	BUD13	P46947	266 aa	Predicted RBP	0.66	□□□□□ -2.3
RPL39	YJL189W	NOP6	Q07623	225 aa	Known RBP	0.66	□□□□□ -2.3
RPL39	YJL189W	FEX1	Q08913	375 aa		0.66	□□□□□ -2.3
RPL39	YJL189W	FEX2	Q08991	375 aa		0.66	□□□□□ -2.3
RPL39	YJL189W	CTA1	P15202	515 aa		0.65	□□□□□ -2.31
RPL39	YJL189W	NOC2	P39744	710 aa	Known RBP	0.65	□□□□□ -2.31
RPL39	YJL189W	YFR018C	P43599	363 aa		0.65	□□□□□ -2.31
RPL39	YJL189W	YFR045W	P43617	309 aa		0.65	□□□□□ -2.31
RPL39	YJL189W	RTT102	P53330	157 aa		0.65	□□□□□ -2.31
RPL39	YJL189W	DIB1	Q06819	143 aa	Predicted RBP	0.65	□□□□□ -2.31
RPL39	YJL189W	UAF30	Q08747	228 aa		0.65	□□□□□ -2.31
RPL39	YJL189W	SGT2	Q12118	346 aa	Known RBP	0.65	□□□□□ -2.31
RPL39	YJL189W	RRG1	Q12167	365 aa	Predicted RBP	0.65	□□□□□ -2.31
RPL39	YJL189W	PDE2	P06776	526 aa		0.64	□□□□□ -2.31
RPL39	YJL189W	RSA4	P25382	515 aa	Known RBP	0.64	□□□□□ -2.31
RPL39	YJL189W	INO2	P26798	304 aa		0.64	□□□□□ -2.31
RPL39	YJL189W	URA10	P30402	227 aa		0.64	□□□□□ -2.31
RPL39	YJL189W	YKR015C	P36111	568 aa		0.64	□□□□□ -2.31
RPL39	YJL189W	SPP381	P38282	291 aa	Predicted RBP	0.64	□□□□□ -2.31
RPL39	YJL189W	FMP48	P53233	369 aa		0.64	□□□□□ -2.31
RPL39	YJL189W	MEH1	Q02205	184 aa		0.64	□□□□□ -2.31
RPL39	YJL189W	PEX30	Q06169	523 aa		0.64	□□□□□ -2.31
RPL39	YJL189W	SHS1	Q07657	551 aa		0.64	□□□□□ -2.31
RPL39	YJL189W	SFI1	Q12369	946 aa		0.64	□□□□□ -2.31
RPL39	YJL189W	RRP7	P25368	297 aa	Predicted RBP	0.63	□□□□□ -2.31
RPL39	YJL189W	NFU1	P32860	256 aa		0.63	□□□□□ -2.31
RPL39	YJL189W	MNL1	P38888	796 aa		0.63	□□□□□ -2.31
RPL39	YJL189W	ZIM17	P42844	174 aa		0.63	□□□□□ -2.31
RPL39	YJL189W	CSI1	Q04368	295 aa		0.63	□□□□□ -2.31
RPL39	YJL189W	MRX4	Q12467	430 aa		0.63	□□□□□ -2.31
RPL39	YJL189W	VPS63	O13549	108 aa		0.62	□□□□□ -2.31
RPL39	YJL189W	ADH3	P07246	375 aa	Known RBP	0.62	□□□□□ -2.31
RPL39	YJL189W	YEL043W	P32618	956 aa		0.62	□□□□□ -2.31
RPL39	YJL189W	IST2	P38250	946 aa		0.62	□□□□□ -2.31
RPL39	YJL189W	HIT1	P46973	164 aa		0.62	□□□□□ -2.31
RPL39	YJL189W	IES3	Q12345	250 aa		0.62	□□□□□ -2.31
RPL39	YJL189W	MRPL8	P22353	238 aa		0.61	□□□□□ -2.31
RPL39	YJL189W	CPR2	P23285	205 aa		0.61	□□□□□ -2.31
RPL39	YJL189W	YKL071W	P36086	256 aa		0.61	□□□□□ -2.31
RPL39	YJL189W	MED8	P38304	223 aa		0.61	□□□□□ -2.31
RPL39	YJL189W	EFM1	P38732	585 aa		0.61	□□□□□ -2.31
RPL39	YJL189W	YGL118C	P53132	145 aa		0.61	□□□□□ -2.31
RPL39	YJL189W	YGR111W	P53265	400 aa		0.61	□□□□□ -2.31
RPL39	YJL189W	VPS72	Q03388	795 aa		0.61	□□□□□ -2.31
RPL39	YJL189W	TSR2	Q06672	205 aa	Known RBP	0.61	□□□□□ -2.31
RPL39	YJL189W	YDL121C	Q07541	149 aa		0.61	□□□□□ -2.31
RPL39	YJL189W	AAD15	Q08361	143 aa		0.61	□□□□□ -2.31
RPL39	YJL189W	UBA3	Q99344	299 aa		0.61	□□□□□ -2.31
RPL39	YJL189W	RFT1	P38206	574 aa	Predicted RBP	0.6	□□□□□ -2.31
RPL39	YJL189W	YIL054W	P40524	105 aa		0.6	□□□□□ -2.31
RPL39	YJL189W	DAN1	P47178	298 aa		0.6	□□□□□ -2.31
RPL39	YJL189W	YNL095C	P53932	642 aa		0.6	□□□□□ -2.31
RPL39	YJL189W	RDS3	Q06835	107 aa	Predicted RBP	0.6	□□□□□ -2.31
RPL39	YJL189W	ALE1	Q08548	619 aa		0.6	□□□□□ -2.31
RPL39	YJL189W	TAF10	Q12030	206 aa		0.6	□□□□□ -2.31
RPL39	YJL189W	FUR1	P18562	216 aa	Known RBP	0.59	□□□□□ -2.31
RPL39	YJL189W	CDC42	P19073	191 aa		0.59	□□□□□ -2.31
RPL39	YJL189W	YHR182W	P38870	785 aa		0.59	□□□□□ -2.31
RPL39	YJL189W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.31	not detected
RPL39	YJL189W	LCB2	P40970	561 aa		0.59	□□□□□ -2.31
RPL39	YJL189W	MDM1	Q01846	1127 aa		0.59	□□□□□ -2.31
RPL39	YJL189W	MYO5	Q04439	1219 aa	Known RBP	0.59	□□□□□ -2.31
RPL39	YJL189W	YOL075C	Q08234	1294 aa		0.59	□□□□□ -2.31
RPL39	YJL189W	DCI1	Q08558	271 aa		0.59	□□□□□ -2.31
RPL39	YJL189W	DSE1	P40077	573 aa		0.58	□□□□□ -2.32
RPL39	YJL189W	MIC19	P43594	170 aa		0.58	□□□□□ -2.32
RPL39	YJL189W	TPC1	P53257	314 aa		0.58	□□□□□ -2.32
RPL39	YJL189W	SYF2	P53277	215 aa	Predicted RBP	0.58	□□□□□ -2.32
RPL39	YJL189W	SSU72	P53538	206 aa	Predicted RBP	0.58	□□□□□ -2.32
RPL39	YJL189W	YDR541C	Q03049	344 aa		0.58	□□□□□ -2.32
RPL39	YJL189W	NDL1	Q06568	189 aa		0.58	□□□□□ -2.32
RPL39	YJL189W	YHR086W-A	Q3E746	53 aa		0.58	□□□□□ -2.32
RPL39	YJL189W	ITR2	P30606	609 aa		0.57	□□□□□ -2.32
RPL39	YJL189W	NRG2	P38082	220 aa		0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 97.6 ms