RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W TLG1Q03322 224 aa3.26□□□□□ -1.89
BCD1YHR040W YDR179W-AQ03983 463 aa3.26□□□□□ -1.89
BCD1YHR040W GAL83Q04739 417 aa3.26□□□□□ -1.89
BCD1YHR040W STP3Q05937 343 aa3.26□□□□□ -1.89
BCD1YHR040W NEJ1Q06148 342 aa3.26□□□□□ -1.89
BCD1YHR040W RAD34Q06665 692 aa3.26□□□□□ -1.89
BCD1YHR040W YLR040CQ07988 224 aa3.26□□□□□ -1.89
BCD1YHR040W YOL073CQ08232 322 aa3.26□□□□□ -1.89
BCD1YHR040W YOR387CQ08910 206 aa3.26□□□□□ -1.89
BCD1YHR040W YPR011CQ12251 326 aa3.26□□□□□ -1.89
BCD1YHR040W PRS5Q12265 496 aaKnown RBP3.26□□□□□ -1.89
BCD1YHR040W GLE1Q12315 538 aa3.26□□□□□ -1.89
BCD1YHR040W ARG81P05085 880 aa3.25□□□□□ -1.89
BCD1YHR040W STE7P06784 515 aa3.25□□□□□ -1.89
BCD1YHR040W CDC21P06785 304 aa3.25□□□□□ -1.89
BCD1YHR040W DAP2P18962 818 aa3.25□□□□□ -1.89
BCD1YHR040W KIN3P22209 435 aa3.25□□□□□ -1.89
BCD1YHR040W UBC8P28263 218 aa3.25□□□□□ -1.89
BCD1YHR040W SAC1P32368 623 aaKnown RBP3.25□□□□□ -1.89
BCD1YHR040W SDH3P33421 198 aa3.25□□□□□ -1.89
BCD1YHR040W SPO23P33757 523 aa3.25□□□□□ -1.89
BCD1YHR040W LOT5P34234 306 aa3.25□□□□□ -1.89
BCD1YHR040W GMH1P36125 273 aa3.25□□□□□ -1.89
BCD1YHR040W YPK3P38070 525 aa3.25□□□□□ -1.89
BCD1YHR040W SDH8P38345 138 aa3.25□□□□□ -1.89
BCD1YHR040W INM1P38710 295 aa3.25□□□□□ -1.89
BCD1YHR040W EGD2P38879 174 aaKnown RBP3.25□□□□□ -1.89
BCD1YHR040W PCF11P39081 626 aaPredicted RBP3.25□□□□□ -1.89
BCD1YHR040W ISC1P40015 477 aaKnown RBP3.25□□□□□ -1.89
BCD1YHR040W BUR6P40096 142 aa3.25□□□□□ -1.89
BCD1YHR040W SEC24P40482 926 aaKnown RBP3.25□□□□□ -1.89
BCD1YHR040W SGN1P40561 250 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
BCD1YHR040W SWP82P43554 623 aa3.25□□□□□ -1.89
BCD1YHR040W FET5P43561 622 aa3.25□□□□□ -1.89
BCD1YHR040W CTK2P46962 323 aa3.25□□□□□ -1.89
BCD1YHR040W BUL1P48524 976 aa3.25□□□□□ -1.89
BCD1YHR040W LCL3P53153 274 aa3.25□□□□□ -1.89
BCD1YHR040W YGR168CP53293 376 aa3.25□□□□□ -1.89
BCD1YHR040W ERV25P54837 211 aaKnown RBP3.25□□□□□ -1.89
BCD1YHR040W TIM11P81449 96 aaPredicted RBP3.25□□□□□ -1.89
BCD1YHR040W GIP3Q03016 1276 aa3.25□□□□□ -1.89
BCD1YHR040W MET31Q03081 177 aa3.25□□□□□ -1.89
BCD1YHR040W RSN1Q03516 953 aa3.25□□□□□ -1.89
BCD1YHR040W FIN1Q03898 291 aa3.25□□□□□ -1.89
BCD1YHR040W RRP17Q04031 235 aaPredicted RBP3.25□□□□□ -1.89
BCD1YHR040W URC2Q04411 772 aa3.25□□□□□ -1.89
BCD1YHR040W YDL114WQ07530 308 aa3.25□□□□□ -1.89
BCD1YHR040W DTD1Q07648 150 aaKnown RBP3.25□□□□□ -1.89
BCD1YHR040W YOL159CQ08300 171 aa3.25□□□□□ -1.89
BCD1YHR040W SLF1Q12034 447 aaKnown RBP3.25□□□□□ -1.89
BCD1YHR040W RGT2Q12300 763 aa3.25□□□□□ -1.89
BCD1YHR040W TRM10Q12400 293 aa3.25□□□□□ -1.89
BCD1YHR040W RHO1P06780 209 aaKnown RBP3.24□□□□□ -1.89
BCD1YHR040W DST1P07273 309 aa3.24□□□□□ -1.89
BCD1YHR040W UNG1P12887 359 aa3.24□□□□□ -1.89
BCD1YHR040W FPR1P20081 114 aaKnown RBP3.24□□□□□ -1.89
BCD1YHR040W VMA16P23968 213 aa3.24□□□□□ -1.89
BCD1YHR040W SLM5P25345 492 aaKnown RBP3.24□□□□□ -1.89
BCD1YHR040W RAD51P25454 400 aa3.24□□□□□ -1.89
BCD1YHR040W DAL80P26343 269 aa3.24□□□□□ -1.89
BCD1YHR040W YJU2P28320 278 aaPredicted RBP3.24□□□□□ -1.89
BCD1YHR040W MRPL9P31334 269 aa3.24□□□□□ -1.89
BCD1YHR040W NTG1P31378 399 aa3.24□□□□□ -1.89
BCD1YHR040W NTH1P32356 751 aa3.24□□□□□ -1.89
BCD1YHR040W ATP11P32453 318 aa3.24□□□□□ -1.89
BCD1YHR040W HIR2P32480 875 aa3.24□□□□□ -1.89
BCD1YHR040W MSS1P32559 526 aaPredicted RBP3.24□□□□□ -1.89
BCD1YHR040W CAT2P32796 670 aaKnown RBP3.24□□□□□ -1.89
BCD1YHR040W RIB7P33312 244 aa3.24□□□□□ -1.89
BCD1YHR040W WBP1P33767 430 aaKnown RBP3.24□□□□□ -1.89
BCD1YHR040W TPO5P36029 618 aa3.24□□□□□ -1.89
BCD1YHR040W TCD2P36101 447 aaKnown RBP3.24□□□□□ -1.89
BCD1YHR040W ADH5P38113 351 aaKnown RBP3.24□□□□□ -1.89
BCD1YHR040W ECM8P38246 354 aa3.24□□□□□ -1.89
BCD1YHR040W YHR097CP38809 366 aaKnown RBP3.24□□□□□ -1.89
BCD1YHR040W YPT35P38815 214 aaKnown RBP3.24□□□□□ -1.89
BCD1YHR040W FMO1P38866 432 aa3.24□□□□□ -1.89
BCD1YHR040W KRE29P40026 464 aa3.24□□□□□ -1.89
BCD1YHR040W PKP1P40530 394 aa3.24□□□□□ -1.89
BCD1YHR040W HXT14P42833 540 aa3.24□□□□□ -1.89
BCD1YHR040W YGR201CP42936 225 aa3.24□□□□□ -1.89
BCD1YHR040W GAT1P43574 510 aa3.24□□□□□ -1.89
BCD1YHR040W COG7P53195 279 aa3.24□□□□□ -1.89
BCD1YHR040W IMO32P53219 342 aa3.24□□□□□ -1.89
BCD1YHR040W MPS1P54199 764 aa3.24□□□□□ -1.89
BCD1YHR040W SED5Q01590 340 aa3.24□□□□□ -1.89
BCD1YHR040W SPR6Q01684 191 aa3.24□□□□□ -1.89
BCD1YHR040W YKR005CQ02203 525 aa3.24□□□□□ -1.89
BCD1YHR040W SMA1Q02651 245 aa3.24□□□□□ -1.89
BCD1YHR040W SMP3Q04174 516 aa3.24□□□□□ -1.89
BCD1YHR040W EMI1Q04406 187 aa3.24□□□□□ -1.89
BCD1YHR040W APC4Q04601 652 aa3.24□□□□□ -1.89
BCD1YHR040W SPO77Q06134 477 aa3.24□□□□□ -1.89
BCD1YHR040W MDM36Q06820 579 aa3.24□□□□□ -1.89
BCD1YHR040W IZH3Q07959 543 aa3.24□□□□□ -1.89
BCD1YHR040W FMP40Q08968 688 aaPredicted RBP3.24□□□□□ -1.89
BCD1YHR040W MLH3Q12083 715 aa3.24□□□□□ -1.89
BCD1YHR040W RTC5Q12108 567 aaKnown RBP3.24□□□□□ -1.89
BCD1YHR040W PER33Q12144 273 aa3.24□□□□□ -1.89
BCD1YHR040W YPL245WQ12179 454 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms