RNA–Protein interactions for RNA: YGL145W

TIP20, Transcript of Peripheral membrane protein required for COPI vesicle fusion to the ER, yeast

Gene TIP20, Length 2,106 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIP20	YGL145W	MCR1	P36060	302 aa	Known RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	CGR1	P53188	120 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	PXR1	P53335	271 aa	Predicted RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	TDA7	P53882	636 aa	Predicted RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	MRPS17	Q03246	237 aa	Predicted RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	MYO5	Q04439	1219 aa	Known RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	SSQ1	Q05931	657 aa	Predicted RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	MDM36	Q06820	579 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	TIM18	Q08749	192 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	MET5	P47169	1442 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	RPL42A	P0CX27	106 aa	Known RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	RPL42B	P0CX28	106 aa	Known RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	MRPL8	P22353	238 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	YCR022C	P25620	114 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	PRO3	P32263	286 aa	Known RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	MKK1	P32490	508 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	GCG1	P32656	232 aa	Known RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	CYM1	P32898	989 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	RSM22	P36056	628 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	RRT5	P43607	289 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	AIM24	P47127	394 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	OKP1	P53298	406 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	MKC7	P53379	596 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	HER2	Q03557	464 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	SMD2	Q06217	110 aa	Known RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	IRC10	Q08118	586 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	RAX1	Q08760	435 aa		4.37	□□□□□ -1.71
TIP20	YGL145W	SAM4	Q08985	325 aa	Known RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	TPT1	Q12272	230 aa	Known RBP	4.37	□□□□□ -1.71
TIP20	YGL145W	PGK1	P00560	416 aa	Known RBP	4.36	□□□□□ -1.71
TIP20	YGL145W	YEF1	P32622	495 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	DTR1	P38125	572 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	BIG1	P38813	335 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	YGR210C	P42942	411 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	YFL040W	P43562	540 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	AZR1	P50080	613 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	YNL181W	P53878	407 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	IDP3	P53982	420 aa	Known RBP	4.36	□□□□□ -1.71
TIP20	YGL145W	YMR209C	Q03648	457 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	ENT5	Q03769	411 aa	Known RBP	4.36	□□□□□ -1.71
TIP20	YGL145W	CSM3	Q04659	317 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	PBP4	Q07362	185 aa	Known RBP	4.36	□□□□□ -1.71
TIP20	YGL145W	SMC5	Q08204	1093 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	OSW1	Q08692	278 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	SET6	Q12529	373 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	IML1	P47170	1584 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	DOP1	Q03921	1698 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	TDH2	P00358	332 aa	Known RBP	4.36	□□□□□ -1.71
TIP20	YGL145W	MATALPHA1	P0CY06	175 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	HMLALPHA1	P0CY07	175 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	CAP2	P13517	287 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	YSR3	P23501	404 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	EXG1	P23776	448 aa	Known RBP	4.36	□□□□□ -1.71
TIP20	YGL145W	YCP4	P25349	247 aa	Known RBP	4.36	□□□□□ -1.71
TIP20	YGL145W	RME1	P32338	300 aa	Known RBP	4.36	□□□□□ -1.71
TIP20	YGL145W	AVT4	P50944	713 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	SEH1	P53011	349 aa	Known RBP	4.36	□□□□□ -1.71
TIP20	YGL145W	YPL080C	Q02826	108 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	SNZ1	Q03148	297 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	GTO3	Q04806	366 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	GMC2	Q06201	188 aa		4.36	□□□□□ -1.71
TIP20	YGL145W	DRS2	P39524	1355 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
TIP20	YGL145W	MBR1	P23493	339 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	RRT12	P25381	491 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	POP5	P28005	173 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	GLC7	P32598	312 aa	Known RBP	4.35	□□□□□ -1.71
TIP20	YGL145W	SIP2	P34164	415 aa	Known RBP	4.35	□□□□□ -1.71
TIP20	YGL145W	YNK1	P36010	153 aa	Known RBP	4.35	□□□□□ -1.71
TIP20	YGL145W	FLO5	P38894	1075 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	MST28	P39552	234 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	MRX5	P47007	382 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	COX16	P47081	118 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	STP1	Q00947	519 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	YLR283W	Q05867	314 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	VPS74	Q06385	345 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	POM152	P39685	1337 aa		4.35	□□□□□ -1.71
TIP20	YGL145W	MET16	P18408	261 aa	Predicted RBP	4.34	□□□□□ -1.71
TIP20	YGL145W	HAT2	P39984	401 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	AGP3	P43548	558 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	CCE1	Q03702	353 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	ECI1	Q05871	280 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	TSR1	Q07381	788 aa	Known RBP	4.34	□□□□□ -1.71
TIP20	YGL145W	PAM18	Q07914	168 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	YPQ1	Q12010	308 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	NUP192	P47054	1683 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	NUP188	P52593	1655 aa	Known RBP	4.34	□□□□□ -1.71
TIP20	YGL145W	RPS5	P26783	225 aa	Known RBP	4.34	□□□□□ -1.71
TIP20	YGL145W	ARC19	P33204	171 aa	Known RBP	4.34	□□□□□ -1.71
TIP20	YGL145W	CAB3	P36076	571 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	YKL071W	P36086	256 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	GEP4	P38812	185 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	RBG1	P39729	369 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	COA1	P40452	197 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	YIL024C	P40543	189 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	KEG1	P43614	200 aa		4.34	□□□□□ -1.71
TIP20	YGL145W	SDO1	Q07953	250 aa	Known RBP	4.34	□□□□□ -1.71
TIP20	YGL145W	SLF1	Q12034	447 aa	Known RBP	4.34	□□□□□ -1.71
TIP20	YGL145W	FUS3	P16892	353 aa	Known RBP	4.33	□□□□□ -1.72
TIP20	YGL145W	PTP1	P25044	335 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms