RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C YER184CP39961 794 aa5.05□□□□□ -1.6
RPT6YGL048C YER137CP40083 148 aaKnown RBP5.05□□□□□ -1.6
RPT6YGL048C MAD2P40958 196 aa5.05□□□□□ -1.6
RPT6YGL048C YPT32P51996 222 aaKnown RBP5.05□□□□□ -1.6
RPT6YGL048C ROG1P53118 685 aa5.05□□□□□ -1.6
RPT6YGL048C TWF1P53250 332 aa5.05□□□□□ -1.6
RPT6YGL048C SLM2P53955 656 aa5.05□□□□□ -1.6
RPT6YGL048C YML108WQ03759 105 aa5.05□□□□□ -1.6
RPT6YGL048C HMO1Q03973 246 aaKnown RBP5.05□□□□□ -1.6
RPT6YGL048C ATG33Q06485 197 aa5.05□□□□□ -1.6
RPT6YGL048C YPD1Q07688 167 aa5.05□□□□□ -1.6
RPT6YGL048C YLL007CQ07799 665 aa5.05□□□□□ -1.6
RPT6YGL048C XYL2Q07993 356 aa5.05□□□□□ -1.6
RPT6YGL048C DCI1Q08558 271 aa5.05□□□□□ -1.6
RPT6YGL048C MSH5Q12175 901 aa5.05□□□□□ -1.6
RPT6YGL048C PNS1Q12412 539 aa5.05□□□□□ -1.6
RPT6YGL048C VPS63O13549 108 aa5.04□□□□□ -1.6
RPT6YGL048C RHO2P06781 192 aa5.04□□□□□ -1.6
RPT6YGL048C SGV1P23293 657 aaKnown RBP5.04□□□□□ -1.6
RPT6YGL048C MGR1P25573 417 aa5.04□□□□□ -1.6
RPT6YGL048C RAD14P28519 371 aa5.04□□□□□ -1.6
RPT6YGL048C YMC1P32331 307 aa5.04□□□□□ -1.6
RPT6YGL048C AAR2P32357 355 aaPredicted RBP5.04□□□□□ -1.6
RPT6YGL048C RPS27AP35997 82 aaKnown RBP5.04□□□□□ -1.6
RPT6YGL048C YKL071WP36086 256 aa5.04□□□□□ -1.6
RPT6YGL048C ASC1P38011 319 aaKnown RBP5.04□□□□□ -1.6
RPT6YGL048C SRO77P38163 1010 aa5.04□□□□□ -1.6
RPT6YGL048C RPS27BP38711 82 aa5.04□□□□□ -1.6
RPT6YGL048C FRT2P39734 528 aa5.04□□□□□ -1.6
RPT6YGL048C SEC72P39742 193 aaKnown RBP5.04□□□□□ -1.6
RPT6YGL048C JLP2P40206 208 aa5.04□□□□□ -1.6
RPT6YGL048C UTP25P40498 721 aaKnown RBP5.04□□□□□ -1.6
RPT6YGL048C GAB1P41733 394 aa5.04□□□□□ -1.6
RPT6YGL048C VMA13P41807 478 aaKnown RBP5.04□□□□□ -1.6
RPT6YGL048C FKH2P41813 862 aa5.04□□□□□ -1.6
RPT6YGL048C PRM10P42946 383 aa5.04□□□□□ -1.6
RPT6YGL048C LSM1P47017 172 aaKnown RBP5.04□□□□□ -1.6
RPT6YGL048C YJR154WP47181 346 aa5.04□□□□□ -1.6
RPT6YGL048C RRN9P53437 365 aa5.04□□□□□ -1.6
RPT6YGL048C LSM3P57743 89 aaKnown RBP5.04□□□□□ -1.6
RPT6YGL048C RRP40Q08285 240 aaKnown RBP5.04□□□□□ -1.6
RPT6YGL048C YOL159CQ08300 171 aa5.04□□□□□ -1.6
RPT6YGL048C ESA1Q08649 445 aa5.04□□□□□ -1.6
RPT6YGL048C YLR049CQ12110 428 aa5.04□□□□□ -1.6
RPT6YGL048C SLM5P25345 492 aaKnown RBP5.03□□□□□ -1.6
RPT6YGL048C SUI1P32911 108 aaKnown RBP5.03□□□□□ -1.6
RPT6YGL048C YKL107WP34251 309 aa5.03□□□□□ -1.6
RPT6YGL048C YKL070WP36087 169 aa5.03□□□□□ -1.6
RPT6YGL048C YKR078WP36158 585 aaKnown RBP5.03□□□□□ -1.6
RPT6YGL048C APT2P36973 181 aa5.03□□□□□ -1.6
RPT6YGL048C YBL029WP38201 376 aa5.03□□□□□ -1.6
RPT6YGL048C HRB1P38922 454 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
RPT6YGL048C SOP4P39543 234 aaPredicted RBP5.03□□□□□ -1.6
RPT6YGL048C FAR3P46671 204 aa5.03□□□□□ -1.6
RPT6YGL048C ARC1P46672 376 aaKnown RBP5.03□□□□□ -1.6
RPT6YGL048C TMA22P47089 198 aaPredicted RBP5.03□□□□□ -1.6
RPT6YGL048C HAM1P47119 197 aaKnown RBP5.03□□□□□ -1.6
RPT6YGL048C HOC1P47124 396 aa5.03□□□□□ -1.6
RPT6YGL048C LSG1P53145 640 aaKnown RBP5.03□□□□□ -1.6
RPT6YGL048C ORM1P53224 222 aa5.03□□□□□ -1.6
RPT6YGL048C YGR126WP53274 230 aa5.03□□□□□ -1.6
RPT6YGL048C GTR2P53290 341 aa5.03□□□□□ -1.6
RPT6YGL048C RHO5P53879 331 aaKnown RBP5.03□□□□□ -1.6
RPT6YGL048C FAR8Q05040 523 aa5.03□□□□□ -1.6
RPT6YGL048C SFH1Q06168 426 aa5.03□□□□□ -1.6
RPT6YGL048C REX4Q08237 289 aa5.03□□□□□ -1.6
RPT6YGL048C RCN2Q12044 265 aa5.03□□□□□ -1.6
RPT6YGL048C TMS1Q12116 473 aa5.03□□□□□ -1.6
RPT6YGL048C NMD4Q12129 218 aa5.03□□□□□ -1.6
RPT6YGL048C SPE4Q12455 300 aa5.03□□□□□ -1.6
RPT6YGL048C TFB5Q3E7C1 72 aaPredicted RBP5.03□□□□□ -1.6
RPT6YGL048C YCL012CQ8J0M4 134 aa5.03□□□□□ -1.6
RPT6YGL048C HIS3P06633 220 aa5.02□□□□□ -1.61
RPT6YGL048C TY2A-LR1P0C2J4 438 aa5.02□□□□□ -1.61
RPT6YGL048C TY2A-FP0CX61 438 aa5.02□□□□□ -1.61
RPT6YGL048C TY2A-GR2P0CX62 438 aa5.02□□□□□ -1.61
RPT6YGL048C SRV2P17555 526 aaKnown RBP5.02□□□□□ -1.61
RPT6YGL048C GAS1P22146 559 aaKnown RBP5.02□□□□□ -1.61
RPT6YGL048C RVS161P25343 265 aaKnown RBP5.02□□□□□ -1.61
RPT6YGL048C TY2A-CP25383 438 aa5.02□□□□□ -1.61
RPT6YGL048C TAH1P25638 111 aaPredicted RBP5.02□□□□□ -1.61
RPT6YGL048C NAM9P27929 486 aa5.02□□□□□ -1.61
RPT6YGL048C RPD3P32561 433 aa5.02□□□□□ -1.61
RPT6YGL048C LST4P34239 828 aa5.02□□□□□ -1.61
RPT6YGL048C OAR1P35731 278 aa5.02□□□□□ -1.61
RPT6YGL048C CDS1P38221 457 aa5.02□□□□□ -1.61
RPT6YGL048C SSH1P38353 490 aaKnown RBP5.02□□□□□ -1.61
RPT6YGL048C SSO2P39926 295 aa5.02□□□□□ -1.61
RPT6YGL048C SCS2P40075 244 aaKnown RBP5.02□□□□□ -1.61
RPT6YGL048C RFC4P40339 323 aaKnown RBP5.02□□□□□ -1.61
RPT6YGL048C RPL10P41805 221 aaKnown RBP5.02□□□□□ -1.61
RPT6YGL048C CAF16P43569 289 aa5.02□□□□□ -1.61
RPT6YGL048C PTR3P43606 678 aa5.02□□□□□ -1.61
RPT6YGL048C BIO3P50277 480 aa5.02□□□□□ -1.61
RPT6YGL048C YGR042WP53227 271 aa5.02□□□□□ -1.61
RPT6YGL048C MRPL22P53881 309 aa5.02□□□□□ -1.61
RPT6YGL048C TY2A-DR2Q03483 438 aa5.02□□□□□ -1.61
RPT6YGL048C RSM24Q03976 319 aa5.02□□□□□ -1.61
RPT6YGL048C MDM30Q05930 598 aa5.02□□□□□ -1.61
RPT6YGL048C YPR147CQ06522 304 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms