RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W LSG1P53145 640 aaKnown RBP4.48□□□□□ -1.69
UBC6YER100W MSO1P53604 210 aaKnown RBP4.48□□□□□ -1.69
UBC6YER100W PET117Q02771 107 aa4.48□□□□□ -1.69
UBC6YER100W SNA4Q07549 140 aa4.48□□□□□ -1.69
UBC6YER100W DAP1Q12091 152 aa4.48□□□□□ -1.69
UBC6YER100W APC9Q12107 265 aa4.48□□□□□ -1.69
UBC6YER100W PCL9Q12477 304 aa4.48□□□□□ -1.69
UBC6YER100W SSK22P25390 1331 aaPredicted RBP4.47□□□□□ -1.69
UBC6YER100W ZIP1P31111 875 aa4.47□□□□□ -1.69
UBC6YER100W ATS1P31386 333 aa4.47□□□□□ -1.69
UBC6YER100W ARO4P32449 370 aaKnown RBP4.47□□□□□ -1.69
UBC6YER100W TMT1P32643 299 aa4.47□□□□□ -1.69
UBC6YER100W AVT5P38176 459 aa4.47□□□□□ -1.69
UBC6YER100W YJR030CP47101 745 aa4.47□□□□□ -1.69
UBC6YER100W SEH1P53011 349 aaKnown RBP4.47□□□□□ -1.69
UBC6YER100W IRC4Q03036 179 aa4.47□□□□□ -1.69
UBC6YER100W COX20Q04935 205 aa4.47□□□□□ -1.69
UBC6YER100W CTS2Q06350 511 aa4.47□□□□□ -1.69
UBC6YER100W SMC5Q08204 1093 aa4.47□□□□□ -1.69
UBC6YER100W EAF3Q12432 401 aa4.47□□□□□ -1.69
UBC6YER100W TDH3P00359 332 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
UBC6YER100W CPR1P14832 162 aaKnown RBP4.46□□□□□ -1.7
UBC6YER100W FUN26P31381 517 aa4.46□□□□□ -1.7
UBC6YER100W KAR9P32526 644 aa4.46□□□□□ -1.7
UBC6YER100W SPO23P33757 523 aa4.46□□□□□ -1.7
UBC6YER100W YKT6P36015 200 aaKnown RBP4.46□□□□□ -1.7
UBC6YER100W SWD2P36104 329 aaPredicted RBP4.46□□□□□ -1.7
UBC6YER100W YHR045WP38775 560 aa4.46□□□□□ -1.7
UBC6YER100W MDM31P38880 579 aa4.46□□□□□ -1.7
UBC6YER100W YER085CP40058 173 aa4.46□□□□□ -1.7
UBC6YER100W MAM33P40513 266 aa4.46□□□□□ -1.7
UBC6YER100W YIL029CP40538 142 aa4.46□□□□□ -1.7
UBC6YER100W GOR1P53839 350 aa4.46□□□□□ -1.7
UBC6YER100W YLR012CQ07927 99 aa4.46□□□□□ -1.7
UBC6YER100W HTZ1Q12692 134 aaKnown RBP4.46□□□□□ -1.7
UBC6YER100W MCK1P21965 375 aaKnown RBP4.45□□□□□ -1.7
UBC6YER100W RVS161P25343 265 aaKnown RBP4.45□□□□□ -1.7
UBC6YER100W RPL16AP26784 199 aaKnown RBP4.45□□□□□ -1.7
UBC6YER100W POP5P28005 173 aa4.45□□□□□ -1.7
UBC6YER100W IMP3P32899 183 aaPredicted RBP4.45□□□□□ -1.7
UBC6YER100W MSN4P33749 630 aa4.45□□□□□ -1.7
UBC6YER100W BNA6P43619 295 aa4.45□□□□□ -1.7
UBC6YER100W CTK3P46963 296 aaPredicted RBP4.45□□□□□ -1.7
UBC6YER100W TIM21P53220 239 aa4.45□□□□□ -1.7
UBC6YER100W SED5Q01590 340 aa4.45□□□□□ -1.7
UBC6YER100W YPL080CQ02826 108 aa4.45□□□□□ -1.7
UBC6YER100W YPL077CQ02831 240 aa4.45□□□□□ -1.7
UBC6YER100W YLR283WQ05867 314 aa4.45□□□□□ -1.7
UBC6YER100W PBP4Q07362 185 aaKnown RBP4.45□□□□□ -1.7
UBC6YER100W BTS1Q12051 335 aa4.45□□□□□ -1.7
UBC6YER100W ADF1Q2V2Q1 113 aa4.45□□□□□ -1.7
UBC6YER100W CYC3P06182 269 aa4.44□□□□□ -1.7
UBC6YER100W YSR3P23501 404 aa4.44□□□□□ -1.7
UBC6YER100W RRT12P25381 491 aa4.44□□□□□ -1.7
UBC6YER100W MEI5P32489 222 aa4.44□□□□□ -1.7
UBC6YER100W ZRT1P32804 376 aa4.44□□□□□ -1.7
UBC6YER100W TCD1P38756 429 aa4.44□□□□□ -1.7
UBC6YER100W SLM1P40485 686 aa4.44□□□□□ -1.7
UBC6YER100W YJL213WP40896 331 aa4.44□□□□□ -1.7
UBC6YER100W IDP2P41939 412 aa4.44□□□□□ -1.7
UBC6YER100W PMT4P46971 762 aa4.44□□□□□ -1.7
UBC6YER100W MTM1P53320 366 aa4.44□□□□□ -1.7
UBC6YER100W TDA1Q03533 586 aa4.44□□□□□ -1.7
UBC6YER100W ESA1Q08649 445 aa4.44□□□□□ -1.7
UBC6YER100W HNT3Q08702 217 aa4.44□□□□□ -1.7
UBC6YER100W YPQ1Q12010 308 aa4.44□□□□□ -1.7
UBC6YER100W YGK3Q12222 375 aaPredicted RBP4.44□□□□□ -1.7
UBC6YER100W ATG31Q12421 196 aa4.44□□□□□ -1.7
UBC6YER100W ADH2P00331 348 aaKnown RBP4.43□□□□□ -1.7
UBC6YER100W RAD3P06839 778 aa4.43□□□□□ -1.7
UBC6YER100W VPS3P23643 1011 aa4.43□□□□□ -1.7
UBC6YER100W CWP1P28319 239 aa4.43□□□□□ -1.7
UBC6YER100W DTR1P38125 572 aa4.43□□□□□ -1.7
UBC6YER100W SMF2P38778 549 aa4.43□□□□□ -1.7
UBC6YER100W MSS2P40990 351 aa4.43□□□□□ -1.7
UBC6YER100W CIN2P46670 268 aa4.43□□□□□ -1.7
UBC6YER100W LCB3P47013 409 aa4.43□□□□□ -1.7
UBC6YER100W MTQ1P53944 314 aa4.43□□□□□ -1.7
UBC6YER100W NUP116Q02630 1113 aa4.43□□□□□ -1.7
UBC6YER100W SLM3Q12093 417 aa4.43□□□□□ -1.7
UBC6YER100W YDL109CQ12103 647 aa4.43□□□□□ -1.7
UBC6YER100W IZH4Q99393 312 aa4.43□□□□□ -1.7
UBC6YER100W JIP3O13555 125 aa4.42□□□□□ -1.7
UBC6YER100W TRP1P00912 224 aa4.42□□□□□ -1.7
UBC6YER100W HEM4P06174 275 aa4.42□□□□□ -1.7
UBC6YER100W RPB5P20434 215 aa4.42□□□□□ -1.7
UBC6YER100W CHA1P25379 360 aaKnown RBP4.42□□□□□ -1.7
UBC6YER100W AGA1P32323 725 aa4.42□□□□□ -1.7
UBC6YER100W DOA4P32571 926 aa4.42□□□□□ -1.7
UBC6YER100W SUA5P32579 426 aa4.42□□□□□ -1.7
UBC6YER100W PRS1P32895 427 aaKnown RBP4.42□□□□□ -1.7
UBC6YER100W SDH3P33421 198 aa4.42□□□□□ -1.7
UBC6YER100W BMH2P34730 273 aaKnown RBP4.42□□□□□ -1.7
UBC6YER100W PRS4P38063 326 aaPredicted RBP4.42□□□□□ -1.7
UBC6YER100W NPT1P39683 429 aaKnown RBP4.42□□□□□ -1.7
UBC6YER100W RTR1P40084 226 aaPredicted RBP4.42□□□□□ -1.7
UBC6YER100W PRM5P40476 318 aa4.42□□□□□ -1.7
UBC6YER100W SHQ1P40486 507 aaPredicted RBP4.42□□□□□ -1.7
UBC6YER100W DFG10P40526 253 aa4.42□□□□□ -1.7
UBC6YER100W YNL320WP42840 284 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms