RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C SLM3Q12093 417 aa1.9□□□□□ -2.11
SNU56YDR240C YOR338WQ99326 363 aa1.9□□□□□ -2.11
SNU56YDR240C CUP2P15315 225 aa1.89□□□□□ -2.11
SNU56YDR240C YBL028CP38202 106 aa1.89□□□□□ -2.11
SNU56YDR240C BDH1P39714 382 aa1.89□□□□□ -2.11
SNU56YDR240C LCP5P40079 357 aaPredicted RBP1.89□□□□□ -2.11
SNU56YDR240C SUR7P54003 302 aa1.89□□□□□ -2.11
SNU56YDR240C TRM82Q03774 444 aa1.89□□□□□ -2.11
SNU56YDR240C RPN8Q08723 338 aaKnown RBP1.89□□□□□ -2.11
SNU56YDR240C DET1Q99288 334 aaKnown RBP1.89□□□□□ -2.11
SNU56YDR240C BEM2P39960 2167 aaKnown RBP1.89□□□□□ -2.11
SNU56YDR240C YJR030CP47101 745 aa1.88□□□□□ -2.11
SNU56YDR240C SMD1Q02260 146 aaPredicted RBP1.88□□□□□ -2.11
SNU56YDR240C SCS7Q03529 384 aa1.88□□□□□ -2.11
SNU56YDR240C GYL1Q04322 720 aa1.88□□□□□ -2.11
SNU56YDR240C YPR078CQ06813 372 aa1.88□□□□□ -2.11
SNU56YDR240C FRE8Q12209 686 aa1.88□□□□□ -2.11
SNU56YDR240C FLO11P08640 1367 aa1.88□□□□□ -2.11
SNU56YDR240C COX10P21592 462 aa1.88□□□□□ -2.11
SNU56YDR240C URA10P30402 227 aa1.88□□□□□ -2.11
SNU56YDR240C MSK1P32048 576 aa1.88□□□□□ -2.11
SNU56YDR240C YPT35P38815 214 aaKnown RBP1.88□□□□□ -2.11
SNU56YDR240C YJL055WP47044 245 aa1.88□□□□□ -2.11
SNU56YDR240C YDL211CQ12121 372 aa1.88□□□□□ -2.11
SNU56YDR240C YDR018CQ12185 396 aa1.88□□□□□ -2.11
SNU56YDR240C SAL1D6W196 494 aa1.87□□□□□ -2.11
SNU56YDR240C DAL5P15365 543 aa1.87□□□□□ -2.11
SNU56YDR240C PSO2P30620 661 aa1.87□□□□□ -2.11
SNU56YDR240C YKL071WP36086 256 aa1.87□□□□□ -2.11
SNU56YDR240C YFH1Q07540 174 aa1.87□□□□□ -2.11
SNU56YDR240C RPS14AP06367 137 aaKnown RBP1.86□□□□□ -2.11
SNU56YDR240C CPT1P17898 393 aa1.86□□□□□ -2.11
SNU56YDR240C FAR1P21268 830 aa1.86□□□□□ -2.11
SNU56YDR240C VMA8P32610 256 aaKnown RBP1.86□□□□□ -2.11
SNU56YDR240C UTR5P32630 166 aa1.86□□□□□ -2.11
SNU56YDR240C RPS14BP39516 138 aaKnown RBP1.86□□□□□ -2.11
SNU56YDR240C LCB2P40970 561 aa1.86□□□□□ -2.11
SNU56YDR240C YFR018CP43599 363 aa1.86□□□□□ -2.11
SNU56YDR240C MLC1P53141 149 aa1.86□□□□□ -2.11
SNU56YDR240C LST7P53237 242 aa1.86□□□□□ -2.11
SNU56YDR240C UTP15Q04305 513 aaKnown RBP1.86□□□□□ -2.11
SNU56YDR240C DIB1Q06819 143 aaPredicted RBP1.86□□□□□ -2.11
SNU56YDR240C PEX27Q08580 376 aa1.86□□□□□ -2.11
SNU56YDR240C VPS63O13549 108 aa1.85□□□□□ -2.11
SNU56YDR240C DBR1P24309 405 aaKnown RBP1.85□□□□□ -2.11
SNU56YDR240C SDH4P37298 181 aa1.85□□□□□ -2.11
SNU56YDR240C PCH2P38126 564 aa1.85□□□□□ -2.11
SNU56YDR240C TAE1P38340 232 aa1.85□□□□□ -2.11
SNU56YDR240C YMR262WP38430 313 aa1.85□□□□□ -2.11
SNU56YDR240C SCC4P40090 624 aa1.85□□□□□ -2.11
SNU56YDR240C EFM4P40516 257 aa1.85□□□□□ -2.11
SNU56YDR240C YNL320WP42840 284 aa1.85□□□□□ -2.11
SNU56YDR240C MIC19P43594 170 aa1.85□□□□□ -2.11
SNU56YDR240C MPS2P53159 387 aa1.85□□□□□ -2.11
SNU56YDR240C SXM1Q04175 944 aaKnown RBP1.85□□□□□ -2.11
SNU56YDR240C YOL075CQ08234 1294 aa1.85□□□□□ -2.11
SNU56YDR240C SCH9P11792 824 aaKnown RBP1.84□□□□□ -2.11
SNU56YDR240C PXA2P34230 853 aa1.84□□□□□ -2.11
SNU56YDR240C GDT1P38301 280 aaPredicted RBP1.84□□□□□ -2.11
SNU56YDR240C RRB1Q04225 511 aaKnown RBP1.84□□□□□ -2.11
SNU56YDR240C RPS23AP0CX29 145 aaKnown RBP1.83□□□□□ -2.12
SNU56YDR240C RPS23BP0CX30 145 aa1.83□□□□□ -2.12
SNU56YDR240C HPR1P17629 752 aaKnown RBP1.83□□□□□ -2.12
SNU56YDR240C ALK2P32789 676 aaPredicted RBP1.83□□□□□ -2.12
SNU56YDR240C TKL2P33315 681 aa1.83□□□□□ -2.12
SNU56YDR240C ECM14P38836 430 aa1.83□□□□□ -2.12
SNU56YDR240C RRG9P40156 214 aa1.83□□□□□ -2.12
SNU56YDR240C SNL1P40548 159 aa1.83□□□□□ -2.12
SNU56YDR240C EPL1P43572 832 aa1.83□□□□□ -2.12
SNU56YDR240C NRM1P53718 249 aa1.83□□□□□ -2.12
SNU56YDR240C PRP46Q12417 451 aaPredicted RBP1.83□□□□□ -2.12
SNU56YDR240C DFM1Q12743 341 aaKnown RBP1.83□□□□□ -2.12
SNU56YDR240C FSH3Q99369 266 aa1.83□□□□□ -2.12
SNU56YDR240C RPS16AP0CX51 143 aaKnown RBP1.82□□□□□ -2.12
SNU56YDR240C RPS16BP0CX52 143 aaKnown RBP1.82□□□□□ -2.12
SNU56YDR240C GRR1P24814 1151 aa1.82□□□□□ -2.12
SNU56YDR240C YIL054WP40524 105 aa1.82□□□□□ -2.12
SNU56YDR240C HSH155P49955 971 aaKnown RBP1.82□□□□□ -2.12
SNU56YDR240C CSI1Q04368 295 aa1.82□□□□□ -2.12
SNU56YDR240C AIM33Q04516 312 aa1.82□□□□□ -2.12
SNU56YDR240C ECM19Q06011 112 aa1.82□□□□□ -2.12
SNU56YDR240C RPL6BP05739 176 aaKnown RBP1.82□□□□□ -2.12
SNU56YDR240C ITR2P30606 609 aa1.82□□□□□ -2.12
SNU56YDR240C IST2P38250 946 aa1.82□□□□□ -2.12
SNU56YDR240C BUD13P46947 266 aaPredicted RBP1.82□□□□□ -2.12
SNU56YDR240C HIT1P46973 164 aa1.82□□□□□ -2.12
SNU56YDR240C LSG1P53145 640 aaKnown RBP1.82□□□□□ -2.12
SNU56YDR240C RPL6AQ02326 176 aaKnown RBP1.82□□□□□ -2.12
SNU56YDR240C ARF2P19146 181 aaKnown RBP1.81□□□□□ -2.12
SNU56YDR240C INO2P26798 304 aa1.81□□□□□ -2.12
SNU56YDR240C ERG9P29704 444 aa1.81□□□□□ -2.12
SNU56YDR240C PPQ1P32945 549 aa1.81□□□□□ -2.12
SNU56YDR240C MDL1P33310 695 aa1.81□□□□□ -2.12
SNU56YDR240C RCK1P38622 512 aa1.81□□□□□ -2.12
SNU56YDR240C LRP1P38801 184 aaKnown RBP1.81□□□□□ -2.12
SNU56YDR240C INP1Q03694 420 aa1.81□□□□□ -2.12
SNU56YDR240C SGT2Q12118 346 aaKnown RBP1.81□□□□□ -2.12
SNU56YDR240C YPR063CQ12160 140 aa1.81□□□□□ -2.12
SNU56YDR240C AIM45Q12480 344 aaKnown RBP1.81□□□□□ -2.12
SNU56YDR240C PAR32Q12515 295 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms