RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	AGX1	P43567	385 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	MOG1	P47123	218 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	SEH1	P53011	349 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	AAT1	Q01802	451 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	ERO1	Q03103	563 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	RRP45	Q05636	305 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	YOL019W	Q08157	551 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	DCI1	Q08558	271 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	APC5	Q08683	685 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	RTN2	Q12443	393 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	RBK1	P25332	333 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	OAC1	P32332	324 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	POL12	P38121	705 aa	Predicted RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	MTC4	P38335	694 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	TSL1	P38427	1098 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	CDC1	P40986	491 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	YJR124C	P47159	448 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	RSM27	P53305	110 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	BUD17	P53727	317 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	ELA1	P53861	379 aa	Predicted RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	CDC14	Q00684	551 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	ODC1	Q03028	310 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	VID22	Q05934	901 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	MRI1	Q06489	411 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	NDE2	Q07500	545 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	LUC7	Q07508	261 aa	Predicted RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	YPL245W	Q12179	454 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	TY1A-NL1	Q12391	440 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	DCN1	Q12395	269 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	HMS1	Q12398	434 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	HBN1	Q96VH4	193 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	DAL81	P21657	970 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	APN1	P22936	367 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	SUA5	P32579	426 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	APL3	P38065	1025 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
UPC2	YDR213W	LSM5	P40089	93 aa	Known RBP	4.03	□□□□□ -1.76
UPC2	YDR213W	ELO3	P40319	345 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	ALG8	P40351	577 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	CAT5	P41735	233 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	TOM22	P49334	152 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	NBP35	P52920	328 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	MNT2	P53059	558 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	ROG1	P53118	685 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	TPS1	Q00764	495 aa	Known RBP	4.03	□□□□□ -1.76
UPC2	YDR213W	ARG5,6	Q01217	863 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	NUP116	Q02630	1113 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	IRC15	Q02733	499 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	TPP1	Q03796	238 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	LRS4	Q04087	347 aa	Known RBP	4.03	□□□□□ -1.76
UPC2	YDR213W	PAL1	Q05518	499 aa	Known RBP	4.03	□□□□□ -1.76
UPC2	YDR213W	HRD3	Q05787	833 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	MRPL35	Q06678	367 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	ASR1	Q06834	288 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	RRP40	Q08285	240 aa	Known RBP	4.03	□□□□□ -1.76
UPC2	YDR213W	NDD1	Q08887	554 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	VPS13	Q07878	3144 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	CDC21	P06785	304 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	TIP1	P27654	210 aa	Predicted RBP	4.03	□□□□□ -1.76
UPC2	YDR213W	AFR1	P33304	620 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	SKN1	P33336	771 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	SSS1	P35179	80 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	BAP2	P38084	609 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	HSE1	P38753	452 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	CTF8	P38877	133 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	ISC1	P40015	477 aa	Known RBP	4.03	□□□□□ -1.76
UPC2	YDR213W	GLR1	P41921	483 aa	Known RBP	4.03	□□□□□ -1.76
UPC2	YDR213W	HSV2	P50079	448 aa	Predicted RBP	4.03	□□□□□ -1.76
UPC2	YDR213W	PHO23	P50947	330 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	ASI3	P53983	676 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	RHO4	Q00246	291 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	KAP120	Q02932	1032 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	MSC2	Q03455	724 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	YDR387C	Q04162	555 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	YMR252C	Q04814	134 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	YDR056C	Q12025	205 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	DIN7	Q12086	430 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	ERP3	Q12403	225 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	TMA7	Q3E764	64 aa	Known RBP	4.03	□□□□□ -1.76
UPC2	YDR213W	YCL001W-B	Q96VH2	84 aa		4.03	□□□□□ -1.76
UPC2	YDR213W	AI3	P03877	415 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	RPB3	P16370	318 aa	Known RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	YCR061W	P25639	631 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	MCM10	P32354	571 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	SCM4	P32564	187 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	YPT52	P36018	234 aa	Known RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	SRP102	P36057	244 aa	Predicted RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	APE3	P37302	537 aa	Known RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	SHE1	P38200	338 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	PRM9	P39551	298 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	AIR1	P40507	360 aa	Known RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	MNT3	P40549	630 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	YKR011C	Q02209	353 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	ARG7	Q04728	441 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	RBS1	Q05672	457 aa	Known RBP	4.02	□□□□□ -1.77
UPC2	YDR213W	GUP2	Q08929	609 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	YPR145C-A	Q2V2P0	78 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	Q0010	Q9ZZX9	128 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	CDC9	P04819	755 aa		4.02	□□□□□ -1.77
UPC2	YDR213W	SPT3	P06844	337 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms