RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A PDR16P53860 351 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A MRPL19P53875 158 aa-0.21□□□□□ -2.44
TFB5YDR079C-A IPI3P53877 555 aa-0.21□□□□□ -2.44
TFB5YDR079C-A BNI5P53890 448 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A YNL050CP53952 270 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YNL040WP53960 456 aaPredicted RBP-0.21□□□□□ -2.44
TFB5YDR079C-A KTR6P54070 446 aa-0.21□□□□□ -2.44
TFB5YDR079C-A PRO2P54885 456 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A YDR274CP87283 123 aa-0.21□□□□□ -2.44
TFB5YDR079C-A NUP49Q02199 472 aa-0.21□□□□□ -2.44
TFB5YDR079C-A MMT1Q03218 510 aa-0.21□□□□□ -2.44
TFB5YDR079C-A RSM28Q03430 361 aa-0.21□□□□□ -2.44
TFB5YDR079C-A SCS7Q03529 384 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YMR166CQ03829 368 aa-0.21□□□□□ -2.44
TFB5YDR079C-A URH1Q04179 340 aa-0.21□□□□□ -2.44
TFB5YDR079C-A SPG4Q04438 115 aa-0.21□□□□□ -2.44
TFB5YDR079C-A RTN1Q04947 295 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A YHR050W-AQ05451 56 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YDR341CQ05506 607 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A NDL1Q06568 189 aa-0.21□□□□□ -2.44
TFB5YDR079C-A RAF1Q06891 181 aa-0.21□□□□□ -2.44
TFB5YDR079C-A SIL1Q08199 421 aa-0.21□□□□□ -2.44
TFB5YDR079C-A PEX15Q08215 383 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YOL057WQ08225 711 aa-0.21□□□□□ -2.44
TFB5YDR079C-A MED2Q12124 431 aa-0.21□□□□□ -2.44
TFB5YDR079C-A PER33Q12144 273 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YPR013CQ12145 317 aa-0.21□□□□□ -2.44
TFB5YDR079C-A MSH5Q12175 901 aa-0.21□□□□□ -2.44
TFB5YDR079C-A FRE8Q12209 686 aa-0.21□□□□□ -2.44
TFB5YDR079C-A SCM3Q12334 223 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TY2A-DR1Q12392 438 aa-0.21□□□□□ -2.44
TFB5YDR079C-A SPE4Q12455 300 aa-0.21□□□□□ -2.44
TFB5YDR079C-A MRX4Q12467 430 aa-0.21□□□□□ -2.44
TFB5YDR079C-A SFG1Q12507 346 aa-0.21□□□□□ -2.44
TFB5YDR079C-A PAR32Q12515 295 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A YLR307C-AQ3E825 87 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YOL085CQ99345 113 aa-0.21□□□□□ -2.44
TFB5YDR079C-A Q0144Q9ZZW2 109 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TIM9O74700 87 aa-0.22□□□□□ -2.44
TFB5YDR079C-A CDC8P00572 216 aa-0.22□□□□□ -2.44
TFB5YDR079C-A RAS2P01120 322 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A HSP82P02829 709 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A SCEIP03882 235 aa-0.22□□□□□ -2.44
TFB5YDR079C-A OPI3P05375 206 aa-0.22□□□□□ -2.44
TFB5YDR079C-A STE7P06784 515 aa-0.22□□□□□ -2.44
TFB5YDR079C-A CBP6P07253 162 aaPredicted RBP-0.22□□□□□ -2.44
TFB5YDR079C-A PEP4P07267 405 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A YFR010W-AP0C5N0 62 aa-0.22□□□□□ -2.44
TFB5YDR079C-A COS2P0CX12 379 aa-0.22□□□□□ -2.44
TFB5YDR079C-A COS3P0CX13 379 aa-0.22□□□□□ -2.44
TFB5YDR079C-A RPL19AP0CX82 189 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A RPL19BP0CX83 189 aaPredicted RBP-0.22□□□□□ -2.44
TFB5YDR079C-A GCY1P14065 312 aaKnown RBP RIP-Chip data-0.22□□□□□ -2.44not detected
TFB5YDR079C-A FRS2P15625 503 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A ERD1P16151 362 aa-0.22□□□□□ -2.44
TFB5YDR079C-A ART10P18634 518 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A PRE8P23639 250 aa-0.22□□□□□ -2.44
TFB5YDR079C-A DPB2P24482 689 aaPredicted RBP-0.22□□□□□ -2.44
TFB5YDR079C-A SPB1P25582 841 aaPredicted RBP-0.22□□□□□ -2.44
TFB5YDR079C-A RDS1P25611 832 aa-0.22□□□□□ -2.44
TFB5YDR079C-A RPL5P26321 297 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A ERV1P27882 189 aa-0.22□□□□□ -2.44
TFB5YDR079C-A TPS2P31688 896 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A YEF1P32622 495 aa-0.22□□□□□ -2.44
TFB5YDR079C-A GCG1P32656 232 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A ALK2P32789 676 aaPredicted RBP-0.22□□□□□ -2.44
TFB5YDR079C-A COT1P32798 439 aa-0.22□□□□□ -2.44
TFB5YDR079C-A SKN1P33336 771 aa-0.22□□□□□ -2.44
TFB5YDR079C-A PMT1P33775 817 aa-0.22□□□□□ -2.44
TFB5YDR079C-A SKT5P34226 696 aa-0.22□□□□□ -2.44
TFB5YDR079C-A PXA2P34230 853 aa-0.22□□□□□ -2.44
TFB5YDR079C-A GPX1P36014 167 aa-0.22□□□□□ -2.44
TFB5YDR079C-A SNU114P36048 1008 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A SWD2P36104 329 aaPredicted RBP-0.22□□□□□ -2.44
TFB5YDR079C-A NOP4P37838 685 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A MAL33P38157 468 aa-0.22□□□□□ -2.44
TFB5YDR079C-A SIF2P38262 535 aa-0.22□□□□□ -2.44
TFB5YDR079C-A PHO88P38264 188 aaPredicted RBP-0.22□□□□□ -2.44
TFB5YDR079C-A TAE1P38340 232 aa-0.22□□□□□ -2.44
TFB5YDR079C-A STP2P38704 541 aa-0.22□□□□□ -2.44
TFB5YDR079C-A VMA22P38784 181 aa-0.22□□□□□ -2.44
TFB5YDR079C-A RRP4P38792 359 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A MPC2P38857 129 aa-0.22□□□□□ -2.44
TFB5YDR079C-A FPR3P38911 411 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A YER121WP40076 114 aa-0.22□□□□□ -2.44
TFB5YDR079C-A MEP1P40260 492 aa-0.22□□□□□ -2.44
TFB5YDR079C-A BMT5P40493 336 aa-0.22□□□□□ -2.44
TFB5YDR079C-A PKP1P40530 394 aa-0.22□□□□□ -2.44
TFB5YDR079C-A GCD10P41814 478 aa-0.22□□□□□ -2.44
TFB5YDR079C-A SSU1P41930 458 aa-0.22□□□□□ -2.44
TFB5YDR079C-A COS4P43542 379 aa-0.22□□□□□ -2.44
TFB5YDR079C-A SWP82P43554 623 aa-0.22□□□□□ -2.44
TFB5YDR079C-A TOS3P43637 560 aa-0.22□□□□□ -2.44
TFB5YDR079C-A GCD14P46959 383 aaPredicted RBP-0.22□□□□□ -2.44
TFB5YDR079C-A CTK3P46963 296 aaPredicted RBP-0.22□□□□□ -2.44
TFB5YDR079C-A SFH5P47008 294 aa-0.22□□□□□ -2.44
TFB5YDR079C-A EMC2P47133 292 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A APT1P49435 187 aaKnown RBP-0.22□□□□□ -2.44
TFB5YDR079C-A NAS6P50086 228 aa-0.22□□□□□ -2.44
TFB5YDR079C-A SHE4P51534 789 aa-0.22□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms