RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W DDI1P40087 428 aa5.42□□□□□ -1.54
TRP1YDR007W FMP32P43557 207 aa5.42□□□□□ -1.54
TRP1YDR007W RPA34P47006 233 aaPredicted RBP5.42□□□□□ -1.54
TRP1YDR007W ATG38Q05789 226 aaKnown RBP5.42□□□□□ -1.54
TRP1YDR007W IPK1Q06667 281 aa5.42□□□□□ -1.54
TRP1YDR007W MLH2Q07980 695 aa5.42□□□□□ -1.54
TRP1YDR007W CSR2Q12734 1121 aa5.42□□□□□ -1.54
TRP1YDR007W YFL068WP0CX99 160 aa5.41□□□□□ -1.54
TRP1YDR007W YLL066W-AP0CY00 160 aa5.41□□□□□ -1.54
TRP1YDR007W YLL067W-AP0CY01 160 aa5.41□□□□□ -1.54
TRP1YDR007W GPA2P10823 449 aa5.41□□□□□ -1.54
TRP1YDR007W SCH9P11792 824 aaKnown RBP5.41□□□□□ -1.54
TRP1YDR007W GLN3P18494 730 aa5.41□□□□□ -1.54
TRP1YDR007W TRS65P32893 560 aa5.41□□□□□ -1.54
TRP1YDR007W ANR2P36090 516 aaPredicted RBP5.41□□□□□ -1.54
TRP1YDR007W QDR3P38227 689 aa5.41□□□□□ -1.54
TRP1YDR007W TRM5P38793 499 aa5.41□□□□□ -1.54
TRP1YDR007W BFR1P38934 470 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
TRP1YDR007W VMA7P39111 118 aa5.41□□□□□ -1.54
TRP1YDR007W YER079WP40052 210 aaKnown RBP5.41□□□□□ -1.54
TRP1YDR007W LSM1P47017 172 aaKnown RBP5.41□□□□□ -1.54
TRP1YDR007W ZRG17P53735 605 aa5.41□□□□□ -1.54
TRP1YDR007W YNR068CP53754 272 aa5.41□□□□□ -1.54
TRP1YDR007W VAC7P53950 1165 aa5.41□□□□□ -1.54
TRP1YDR007W RPL22BP56628 122 aaKnown RBP5.41□□□□□ -1.54
TRP1YDR007W DSE3Q08729 430 aa5.41□□□□□ -1.54
TRP1YDR007W RTR2Q12378 196 aa5.41□□□□□ -1.54
TRP1YDR007W ILV5P06168 395 aaKnown RBP5.4□□□□□ -1.54
TRP1YDR007W CHS1P08004 1131 aa5.4□□□□□ -1.54
TRP1YDR007W YGL041W-AP0C5N3 154 aa5.4□□□□□ -1.54
TRP1YDR007W YSC83P32792 385 aa5.4□□□□□ -1.54
TRP1YDR007W CLG1P35190 452 aa5.4□□□□□ -1.54
TRP1YDR007W MTW1P39731 289 aa5.4□□□□□ -1.54
TRP1YDR007W GWT1P47026 490 aa5.4□□□□□ -1.54
TRP1YDR007W LSM8P47093 109 aaKnown RBP5.4□□□□□ -1.54
TRP1YDR007W GPI15P53961 229 aa5.4□□□□□ -1.54
TRP1YDR007W EBS1Q03466 884 aaKnown RBP5.4□□□□□ -1.54
TRP1YDR007W YMR034CQ05131 434 aaPredicted RBP5.4□□□□□ -1.54
TRP1YDR007W BCP1Q06338 283 aa5.4□□□□□ -1.54
TRP1YDR007W ARV1Q06541 321 aa5.4□□□□□ -1.54
TRP1YDR007W ATG34Q12292 412 aa5.4□□□□□ -1.54
TRP1YDR007W MRPL8P22353 238 aa5.39□□□□□ -1.55
TRP1YDR007W RVS161P25343 265 aaKnown RBP5.39□□□□□ -1.55
TRP1YDR007W CYM1P32898 989 aa5.39□□□□□ -1.55
TRP1YDR007W YBL028CP38202 106 aa5.39□□□□□ -1.55
TRP1YDR007W GOS1P38736 223 aa5.39□□□□□ -1.55
TRP1YDR007W YHI9P38765 294 aa5.39□□□□□ -1.55
TRP1YDR007W ATG7P38862 630 aa5.39□□□□□ -1.55
TRP1YDR007W SEN34P39707 275 aa5.39□□□□□ -1.55
TRP1YDR007W EFM3P47163 339 aa5.39□□□□□ -1.55
TRP1YDR007W MND1P53102 219 aa5.39□□□□□ -1.55
TRP1YDR007W FRE4P53746 719 aa5.39□□□□□ -1.55
TRP1YDR007W UTP6Q02354 440 aaKnown RBP5.39□□□□□ -1.55
TRP1YDR007W DIG1Q03063 452 aaKnown RBP5.39□□□□□ -1.55
TRP1YDR007W SNT309Q06091 175 aaPredicted RBP5.39□□□□□ -1.55
TRP1YDR007W YAP7Q08182 245 aa5.39□□□□□ -1.55
TRP1YDR007W SGT1Q08446 395 aa5.39□□□□□ -1.55
TRP1YDR007W SKI7Q08491 747 aaPredicted RBP5.39□□□□□ -1.55
TRP1YDR007W RAX1Q08760 435 aa5.39□□□□□ -1.55
TRP1YDR007W ORT1Q12375 292 aa5.39□□□□□ -1.55
TRP1YDR007W RAD61Q99359 647 aa5.39□□□□□ -1.55
TRP1YDR007W STE3P06783 470 aa5.38□□□□□ -1.55
TRP1YDR007W DST1P07273 309 aa5.38□□□□□ -1.55
TRP1YDR007W CMK2P22517 447 aa5.38□□□□□ -1.55
TRP1YDR007W CPR3P25719 182 aa5.38□□□□□ -1.55
TRP1YDR007W ITR1P30605 584 aa5.38□□□□□ -1.55
TRP1YDR007W SUR1P33300 382 aa5.38□□□□□ -1.55
TRP1YDR007W SRB2P34162 210 aa5.38□□□□□ -1.55
TRP1YDR007W ASK1P35734 292 aa5.38□□□□□ -1.55
TRP1YDR007W MEP1P40260 492 aa5.38□□□□□ -1.55
TRP1YDR007W IKS1P47042 667 aa5.38□□□□□ -1.55
TRP1YDR007W RAD17P48581 401 aa5.38□□□□□ -1.55
TRP1YDR007W PHB2P50085 310 aa5.38□□□□□ -1.55
TRP1YDR007W PRM1P53835 661 aa5.38□□□□□ -1.55
TRP1YDR007W ODC1Q03028 310 aa5.38□□□□□ -1.55
TRP1YDR007W HER2Q03557 464 aa5.38□□□□□ -1.55
TRP1YDR007W FMN1Q03778 218 aa5.38□□□□□ -1.55
TRP1YDR007W SMP3Q04174 516 aa5.38□□□□□ -1.55
TRP1YDR007W YMR226CQ05016 267 aaKnown RBP5.38□□□□□ -1.55
TRP1YDR007W YLR281CQ05863 155 aa5.38□□□□□ -1.55
TRP1YDR007W FEX1Q08913 375 aa5.38□□□□□ -1.55
TRP1YDR007W YPR022CQ12139 1133 aa5.38□□□□□ -1.55
TRP1YDR007W ATG31Q12421 196 aa5.38□□□□□ -1.55
TRP1YDR007W IMA3P0CW40 589 aa5.37□□□□□ -1.55
TRP1YDR007W IMA4P0CW41 589 aa5.37□□□□□ -1.55
TRP1YDR007W HXT2P23585 541 aa5.37□□□□□ -1.55
TRP1YDR007W TAF14P35189 244 aa5.37□□□□□ -1.55
TRP1YDR007W UTP30P36144 274 aaKnown RBP5.37□□□□□ -1.55
TRP1YDR007W YBR032WP38223 100 aa5.37□□□□□ -1.55
TRP1YDR007W OSW5P40219 148 aa5.37□□□□□ -1.55
TRP1YDR007W YIL152WP40455 235 aa5.37□□□□□ -1.55
TRP1YDR007W USE1P53146 245 aa5.37□□□□□ -1.55
TRP1YDR007W SCW4P53334 386 aaKnown RBP5.37□□□□□ -1.55
TRP1YDR007W SED5Q01590 340 aa5.37□□□□□ -1.55
TRP1YDR007W OSH6Q02201 448 aa5.37□□□□□ -1.55
TRP1YDR007W RSN1Q03516 953 aa5.37□□□□□ -1.55
TRP1YDR007W BET5Q03630 159 aa5.37□□□□□ -1.55
TRP1YDR007W BNA7Q04066 261 aa5.37□□□□□ -1.55
TRP1YDR007W RNH1Q04740 348 aa5.37□□□□□ -1.55
TRP1YDR007W PEX10Q05568 337 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms