RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA1	YCR097W	YNL095C	P53932	642 aa		0.99	□□□□□ -2.25
HMRA1	YCR097W	SVL3	Q03088	825 aa	Known RBP	0.99	□□□□□ -2.25
HMRA1	YCR097W	ZRT3	P34240	503 aa		0.98	□□□□□ -2.25
HMRA1	YCR097W	QDR3	P38227	689 aa		0.98	□□□□□ -2.25
HMRA1	YCR097W	RRG9	P40156	214 aa		0.98	□□□□□ -2.25
HMRA1	YCR097W	ECO1	P43605	281 aa		0.98	□□□□□ -2.25
HMRA1	YCR097W	INP1	Q03694	420 aa		0.98	□□□□□ -2.25
HMRA1	YCR097W	YMR244W	Q04018	355 aa		0.98	□□□□□ -2.25
HMRA1	YCR097W	AFI1	Q99222	893 aa		0.98	□□□□□ -2.25
HMRA1	YCR097W	RED1	P14291	827 aa		0.97	□□□□□ -2.25
HMRA1	YCR097W	YKR015C	P36111	568 aa		0.97	□□□□□ -2.25
HMRA1	YCR097W	SER3	P40054	469 aa		0.97	□□□□□ -2.25
HMRA1	YCR097W	CAX4	P53223	239 aa		0.97	□□□□□ -2.25
HMRA1	YCR097W	MYO5	Q04439	1219 aa	Known RBP	0.97	□□□□□ -2.25
HMRA1	YCR097W	MRX4	Q12467	430 aa		0.97	□□□□□ -2.25
HMRA1	YCR097W	PGA3	Q12746	312 aa	Known RBP	0.97	□□□□□ -2.25
HMRA1	YCR097W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected
HMRA1	YCR097W	YER188W	P40103	239 aa		0.96	□□□□□ -2.26
HMRA1	YCR097W	MOB2	P43563	287 aa		0.96	□□□□□ -2.26
HMRA1	YCR097W	YLH47	Q06493	454 aa		0.96	□□□□□ -2.26
HMRA1	YCR097W	RNA1	P11745	407 aa	Known RBP	0.95	□□□□□ -2.26
HMRA1	YCR097W	YIL054W	P40524	105 aa		0.95	□□□□□ -2.26
HMRA1	YCR097W	MIC19	P43594	170 aa		0.95	□□□□□ -2.26
HMRA1	YCR097W	AEP3	Q12089	606 aa		0.95	□□□□□ -2.26
HMRA1	YCR097W	CGI121	Q03705	181 aa	Known RBP	0.94	□□□□□ -2.26
HMRA1	YCR097W	SLM3	Q12093	417 aa		0.94	□□□□□ -2.26
HMRA1	YCR097W	TFC7	Q12415	435 aa		0.94	□□□□□ -2.26
HMRA1	YCR097W	URA10	P30402	227 aa		0.93	□□□□□ -2.26
HMRA1	YCR097W	IST2	P38250	946 aa		0.93	□□□□□ -2.26
HMRA1	YCR097W	POP2	P39008	433 aa		0.93	□□□□□ -2.26
HMRA1	YCR097W	NOC2	P39744	710 aa	Known RBP	0.93	□□□□□ -2.26
HMRA1	YCR097W	YFR018C	P43599	363 aa		0.93	□□□□□ -2.26
HMRA1	YCR097W	RTS3	P53289	263 aa		0.93	□□□□□ -2.26
HMRA1	YCR097W	SUR7	P54003	302 aa		0.93	□□□□□ -2.26
HMRA1	YCR097W	IES3	Q12345	250 aa		0.93	□□□□□ -2.26
HMRA1	YCR097W	RRP7	P25368	297 aa	Predicted RBP	0.92	□□□□□ -2.26
HMRA1	YCR097W	YSC83	P32792	385 aa		0.92	□□□□□ -2.26
HMRA1	YCR097W	NRG2	P38082	220 aa		0.92	□□□□□ -2.26
HMRA1	YCR097W	PAC11	P40960	533 aa		0.92	□□□□□ -2.26
HMRA1	YCR097W	BNI5	P53890	448 aa	Known RBP	0.92	□□□□□ -2.26
HMRA1	YCR097W	TAF11	Q04226	346 aa		0.92	□□□□□ -2.26
HMRA1	YCR097W	VPS63	O13549	108 aa		0.91	□□□□□ -2.26
HMRA1	YCR097W	MRPL8	P22353	238 aa		0.9	□□□□□ -2.27
HMRA1	YCR097W	PHO91	P27514	894 aa		0.9	□□□□□ -2.27
HMRA1	YCR097W	ITR2	P30606	609 aa		0.9	□□□□□ -2.27
HMRA1	YCR097W	CLB6	P32943	380 aa		0.9	□□□□□ -2.27
HMRA1	YCR097W	CTM1	P38818	585 aa		0.9	□□□□□ -2.27
HMRA1	YCR097W	YFR054C	P43622	192 aa		0.9	□□□□□ -2.27
HMRA1	YCR097W	SYF2	P53277	215 aa	Predicted RBP	0.9	□□□□□ -2.27
HMRA1	YCR097W	TRM82	Q03774	444 aa		0.9	□□□□□ -2.27
HMRA1	YCR097W	PHO80	P20052	293 aa		0.89	□□□□□ -2.27
HMRA1	YCR097W	ERV1	P27882	189 aa		0.89	□□□□□ -2.27
HMRA1	YCR097W	RTT102	P53330	157 aa		0.89	□□□□□ -2.27
HMRA1	YCR097W	YLR456W	Q06199	204 aa		0.89	□□□□□ -2.27
HMRA1	YCR097W	ALE1	Q08548	619 aa		0.89	□□□□□ -2.27
HMRA1	YCR097W	TFS1	P14306	219 aa		0.88	□□□□□ -2.27
HMRA1	YCR097W	URA7	P28274	579 aa	Known RBP	0.88	□□□□□ -2.27
HMRA1	YCR097W	YKL071W	P36086	256 aa		0.88	□□□□□ -2.27
HMRA1	YCR097W	GPD2	P41911	440 aa	Known RBP	0.88	□□□□□ -2.27
HMRA1	YCR097W	HIT1	P46973	164 aa		0.88	□□□□□ -2.27
HMRA1	YCR097W	NOP6	Q07623	225 aa	Known RBP	0.88	□□□□□ -2.27
HMRA1	YCR097W	DAN1	P47178	298 aa		0.87	□□□□□ -2.27
HMRA1	YCR097W	YGL118C	P53132	145 aa		0.87	□□□□□ -2.27
HMRA1	YCR097W	SFI1	Q12369	946 aa		0.87	□□□□□ -2.27
HMRA1	YCR097W	FAD1	P38913	306 aa		0.86	□□□□□ -2.27
HMRA1	YCR097W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	RIP-Chip
HMRA1	YCR097W	UBX2	Q04228	584 aa		0.86	□□□□□ -2.27
HMRA1	YCR097W	SHS1	Q07657	551 aa		0.86	□□□□□ -2.27
HMRA1	YCR097W	RPN8	Q08723	338 aa	Known RBP	0.86	□□□□□ -2.27
HMRA1	YCR097W	FMP48	P53233	369 aa		0.85	□□□□□ -2.27
HMRA1	YCR097W	AAD15	Q08361	143 aa		0.85	□□□□□ -2.27
HMRA1	YCR097W	UBA3	Q99344	299 aa		0.85	□□□□□ -2.27
HMRA1	YCR097W	FAR1	P21268	830 aa		0.84	□□□□□ -2.27
HMRA1	YCR097W	RFT1	P38206	574 aa	Predicted RBP	0.84	□□□□□ -2.27
HMRA1	YCR097W	DSK2	P48510	373 aa		0.84	□□□□□ -2.27
HMRA1	YCR097W	DET1	Q99288	334 aa	Known RBP	0.84	□□□□□ -2.27
HMRA1	YCR097W	MRPL20	P22354	195 aa	Predicted RBP	0.83	□□□□□ -2.28
HMRA1	YCR097W	PEX5	P35056	612 aa		0.83	□□□□□ -2.28
HMRA1	YCR097W	VPS72	Q03388	795 aa		0.83	□□□□□ -2.28
HMRA1	YCR097W	RRI2	Q12348	645 aa		0.83	□□□□□ -2.28
HMRA1	YCR097W	YHR086W-A	Q3E746	53 aa		0.82	□□□□□ -2.28
HMRA1	YCR097W	CPR2	P23285	205 aa		0.81	□□□□□ -2.28
HMRA1	YCR097W	VPS68	Q12016	184 aa		0.81	□□□□□ -2.28
HMRA1	YCR097W	NFU1	P32860	256 aa		0.8	□□□□□ -2.28
HMRA1	YCR097W	SMF2	P38778	549 aa		0.8	□□□□□ -2.28
HMRA1	YCR097W	YHR182W	P38870	785 aa		0.8	□□□□□ -2.28
HMRA1	YCR097W	SLM1	P40485	686 aa		0.8	□□□□□ -2.28
HMRA1	YCR097W	YNL040W	P53960	456 aa	Predicted RBP	0.8	□□□□□ -2.28
HMRA1	YCR097W	ADK2	P26364	225 aa		0.79	□□□□□ -2.28
HMRA1	YCR097W	LSM5	P40089	93 aa	Known RBP	0.79	□□□□□ -2.28
HMRA1	YCR097W	RDS3	Q06835	107 aa	Predicted RBP	0.79	□□□□□ -2.28
HMRA1	YCR097W	TY3A-G	Q12173	290 aa		0.79	□□□□□ -2.28
HMRA1	YCR097W	TY3A-I	Q99219	290 aa		0.79	□□□□□ -2.28
HMRA1	YCR097W	PDE2	P06776	526 aa		0.78	□□□□□ -2.28
HMRA1	YCR097W	CAB3	P36076	571 aa		0.78	□□□□□ -2.28
HMRA1	YCR097W	PCH2	P38126	564 aa		0.78	□□□□□ -2.28
HMRA1	YCR097W	RRB1	Q04225	511 aa	Known RBP	0.78	□□□□□ -2.28
HMRA1	YCR097W	TCB2	P48231	1178 aa		0.77	□□□□□ -2.29
HMRA1	YCR097W	SSU72	P53538	206 aa	Predicted RBP	0.77	□□□□□ -2.29
HMRA1	YCR097W	AQR1	P53943	586 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms