RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH3	YCR092C	HOP1	P20050	605 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	RPS1B	P23248	255 aa	Known RBP	1.27	□□□□□ -2.21
MSH3	YCR092C	PHO3	P24031	467 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	RBK1	P25332	333 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	STE50	P25344	346 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	DGR2	P32330	852 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	YKL071W	P36086	256 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	MSG5	P38590	489 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	NSG1	P38837	291 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	VRG4	P40107	337 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	RIC1	P40395	1056 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	STB1	P42845	420 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	YFR035C	P43608	114 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	GLO1	P50107	326 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	BIO3	P50277	480 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	YGL260W	P53056	76 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	YGL101W	P53144	215 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	NPY1	P53164	384 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	ORM1	P53224	222 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	DCP2	P53550	970 aa	Known RBP	1.27	□□□□□ -2.21
MSH3	YCR092C	TVP15	Q03860	143 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	YDR514C	Q04408	483 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	MLC2	Q06580	163 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	RFU1	Q08003	200 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	ULA1	Q12059	462 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	RUP1	Q12242	671 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	WTM1	Q12363	437 aa	Known RBP	1.27	□□□□□ -2.21
MSH3	YCR092C	SRN2	Q99176	213 aa		1.27	□□□□□ -2.21
MSH3	YCR092C	CYR1	P08678	2026 aa	Known RBP	1.27	□□□□□ -2.21
MSH3	YCR092C	YBR056W-A	I2HB52	66 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	ATP6	P00854	259 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	NAM2	P11325	894 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	ART10	P18634	518 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	NUP1	P20676	1076 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	URE2	P23202	354 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	CAM1	P29547	415 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	EMP70	P32802	667 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	LOS1	P33418	1100 aa	Predicted RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	ASK1	P35734	292 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	TUL1	P36096	758 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	MRPL36	P36531	177 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	RIB1	P38066	345 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	APD1	P38281	316 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	EHT1	P38295	451 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	SSZ1	P38788	538 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	RBG1	P39729	369 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	VHR1	P40522	640 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	CIN2	P46670	268 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	LIA1	P47120	325 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	MIG2	P53035	382 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	EFM5	P53200	248 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	NOP19	P53317	196 aa	Predicted RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	OSH6	Q02201	448 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	RCF1	Q03713	159 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	RSC3	Q06639	885 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	ENB1	Q08299	606 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	MUM3	Q08750	479 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	CWC2	Q12046	339 aa	Predicted RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	LYS21	Q12122	440 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	BSC1	Q12140	328 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	MDY2	Q12285	212 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	PST1	Q12355	444 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	YSF3	P0C074	85 aa	Predicted RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	YFR010W-A	P0C5N0	62 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	GCD2	P12754	651 aa	Predicted RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	HSC82	P15108	705 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	ROX3	P25046	220 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	RAD14	P28519	371 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	ERG9	P29704	444 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	1.26	□□□□□ -2.21	not detected
MSH3	YCR092C	APE2	P32454	952 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	RPN2	P32565	945 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	MFT1	P33441	392 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	CLG1	P35190	452 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	LNP1	P38878	278 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	YHR210C	P38893	341 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	RPS26A	P39938	119 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	RPS26B	P39939	119 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	RFC2	P40348	353 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	JEM1	P40358	645 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	YIR020C	P40575	100 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	HXT9	P40885	567 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	SMK1	P41808	388 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	PHO23	P50947	330 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	YGR127W	P53275	312 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	DBP6	P53734	629 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	HXT11	P54862	567 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	YKR005C	Q02203	525 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	TDA1	Q03533	586 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	SNX41	Q04053	625 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	HPT1	Q04178	221 aa	Known RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	URH1	Q04179	340 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	YLR224W	Q05947	369 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	PDR8	Q06149	701 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	RRP15	Q06511	250 aa	Predicted RBP	1.26	□□□□□ -2.21
MSH3	YCR092C	MCH4	Q08268	501 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	VHS3	Q08438	674 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	UPC2	Q12151	913 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	MDM32	Q12171	622 aa		1.26	□□□□□ -2.21
MSH3	YCR092C	YDL180W	Q12301	547 aa		1.26	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms