RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W PMT4P46971 762 aa1.87□□□□□ -2.11
SNC1YAL030W YJR030CP47101 745 aa1.87□□□□□ -2.11
SNC1YAL030W EMC2P47133 292 aaKnown RBP1.87□□□□□ -2.11
SNC1YAL030W KEL2P50090 882 aa1.87□□□□□ -2.11
SNC1YAL030W NUP84P52891 726 aa1.87□□□□□ -2.11
SNC1YAL030W SHE10P53075 577 aa1.87□□□□□ -2.11
SNC1YAL030W YGL185CP53100 379 aa1.87□□□□□ -2.11
SNC1YAL030W SHY1P53266 389 aa1.87□□□□□ -2.11
SNC1YAL030W BIO4P53630 237 aa1.87□□□□□ -2.11
SNC1YAL030W ELP3Q02908 557 aaKnown RBP1.87□□□□□ -2.11
SNC1YAL030W CSI1Q04368 295 aa1.87□□□□□ -2.11
SNC1YAL030W RLP24Q07915 199 aaKnown RBP1.87□□□□□ -2.11
SNC1YAL030W IRC25Q07951 179 aa1.87□□□□□ -2.11
SNC1YAL030W SLM3Q12093 417 aa1.87□□□□□ -2.11
SNC1YAL030W YDL109CQ12103 647 aa1.87□□□□□ -2.11
SNC1YAL030W FCY22Q12119 530 aa1.87□□□□□ -2.11
SNC1YAL030W TIP41Q12199 356 aa1.87□□□□□ -2.11
SNC1YAL030W HMS1Q12398 434 aa1.87□□□□□ -2.11
SNC1YAL030W FMP16Q12497 93 aa1.87□□□□□ -2.11
SNC1YAL030W TDH1P00360 332 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W ATP6P00854 259 aa1.86□□□□□ -2.11
SNC1YAL030W RPL24AP04449 155 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W RPS18AP0CX55 146 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W RPS18BP0CX56 146 aaPredicted RBP1.86□□□□□ -2.11
SNC1YAL030W NAM2P11325 894 aa1.86□□□□□ -2.11
SNC1YAL030W PET123P17558 318 aa1.86□□□□□ -2.11
SNC1YAL030W HPR1P17629 752 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W CPR3P25719 182 aa1.86□□□□□ -2.11
SNC1YAL030W PRR1P28708 518 aa1.86□□□□□ -2.11
SNC1YAL030W DEG1P31115 442 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W IME2P32581 645 aa1.86□□□□□ -2.11
SNC1YAL030W GCG1P32656 232 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W TPO5P36029 618 aa1.86□□□□□ -2.11
SNC1YAL030W ANR2P36090 516 aaPredicted RBP1.86□□□□□ -2.11
SNC1YAL030W FMP46P36141 133 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W IML3P38265 245 aa1.86□□□□□ -2.11
SNC1YAL030W YHR035WP38769 630 aa1.86□□□□□ -2.11
SNC1YAL030W NDT80P38830 627 aa1.86□□□□□ -2.11
SNC1YAL030W FHL1P39521 936 aa1.86□□□□□ -2.11
SNC1YAL030W YNL320WP42840 284 aa1.86□□□□□ -2.11
SNC1YAL030W YGR210CP42942 411 aa1.86□□□□□ -2.11
SNC1YAL030W YJR085CP47131 105 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W MPP6P53725 186 aaPredicted RBP1.86□□□□□ -2.11
SNC1YAL030W BOR1P53838 576 aa1.86□□□□□ -2.11
SNC1YAL030W REX2P54964 269 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W TIM11P81449 96 aaPredicted RBP1.86□□□□□ -2.11
SNC1YAL030W ATC1Q04005 294 aa1.86□□□□□ -2.11
SNC1YAL030W HRI1Q05905 244 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W YLR012CQ07927 99 aa1.86□□□□□ -2.11
SNC1YAL030W RRT8Q08219 342 aa1.86□□□□□ -2.11
SNC1YAL030W RPN8Q08723 338 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W SAM4Q08985 325 aaKnown RBP1.86□□□□□ -2.11
SNC1YAL030W PLP2Q12017 286 aa1.86□□□□□ -2.11
SNC1YAL030W APC9Q12107 265 aa1.86□□□□□ -2.11
SNC1YAL030W SFM1Q12314 213 aa1.86□□□□□ -2.11
SNC1YAL030W YDL199CQ12407 687 aa1.86□□□□□ -2.11
SNC1YAL030W YMR230W-AQ3E7B5 62 aa1.86□□□□□ -2.11
SNC1YAL030W RAD7P06779 565 aa1.85□□□□□ -2.11
SNC1YAL030W RPS8AP0CX39 200 aaKnown RBP1.85□□□□□ -2.11
SNC1YAL030W RPS8BP0CX40 200 aaKnown RBP1.85□□□□□ -2.11
SNC1YAL030W RPL23AP0CX41 137 aaKnown RBP1.85□□□□□ -2.11
SNC1YAL030W RPL23BP0CX42 137 aaKnown RBP1.85□□□□□ -2.11
SNC1YAL030W CBS2P14905 389 aa1.85□□□□□ -2.11
SNC1YAL030W CTA1P15202 515 aa1.85□□□□□ -2.11
SNC1YAL030W MIR1P23641 311 aaKnown RBP1.85□□□□□ -2.11
SNC1YAL030W LDS1P31379 325 aa1.85□□□□□ -2.11
SNC1YAL030W MEI5P32489 222 aa1.85□□□□□ -2.11
SNC1YAL030W NUP2P32499 720 aa1.85□□□□□ -2.11
SNC1YAL030W SPR1P32603 445 aa1.85□□□□□ -2.11
SNC1YAL030W PDC2P32896 925 aa1.85□□□□□ -2.11
SNC1YAL030W COY1P34237 679 aa1.85□□□□□ -2.11
SNC1YAL030W MRPL37P36532 105 aa1.85□□□□□ -2.11
SNC1YAL030W RFS1P38234 210 aaKnown RBP1.85□□□□□ -2.11
SNC1YAL030W RCK2P38623 610 aa1.85□□□□□ -2.11
SNC1YAL030W DSE1P40077 573 aa1.85□□□□□ -2.11
SNC1YAL030W YER186CP40101 306 aa1.85□□□□□ -2.11
SNC1YAL030W PAN6P40459 309 aa1.85□□□□□ -2.11
SNC1YAL030W DFG10P40526 253 aa1.85□□□□□ -2.11
SNC1YAL030W FMP33P46998 180 aa1.85□□□□□ -2.11
SNC1YAL030W MRX5P47007 382 aa1.85□□□□□ -2.11
SNC1YAL030W KAP114P53067 1004 aa1.85□□□□□ -2.11
SNC1YAL030W IMP4P53941 290 aaKnown RBP1.85□□□□□ -2.11
SNC1YAL030W IRC4Q03036 179 aa1.85□□□□□ -2.11
SNC1YAL030W TRM82Q03774 444 aa1.85□□□□□ -2.11
SNC1YAL030W GMC2Q06201 188 aa1.85□□□□□ -2.11
SNC1YAL030W BER1Q06688 274 aaKnown RBP1.85□□□□□ -2.11
SNC1YAL030W MFG1Q07684 458 aa1.85□□□□□ -2.11
SNC1YAL030W DDC1Q08949 612 aa1.85□□□□□ -2.11
SNC1YAL030W TMS1Q12116 473 aa1.85□□□□□ -2.11
SNC1YAL030W FRE8Q12209 686 aa1.85□□□□□ -2.11
SNC1YAL030W RPN6Q12377 434 aa1.85□□□□□ -2.11
SNC1YAL030W PRP46Q12417 451 aaPredicted RBP1.85□□□□□ -2.11
SNC1YAL030W PRM4Q12498 284 aa1.85□□□□□ -2.11
SNC1YAL030W IZH4Q99393 312 aa1.85□□□□□ -2.11
SNC1YAL030W REP1P03871 373 aa1.84□□□□□ -2.11
SNC1YAL030W RSR1P13856 272 aa1.84□□□□□ -2.11
SNC1YAL030W GIT1P25346 518 aa1.84□□□□□ -2.11
SNC1YAL030W ICL1P28240 557 aaPredicted RBP1.84□□□□□ -2.11
SNC1YAL030W COT1P32798 439 aa1.84□□□□□ -2.11
SNC1YAL030W DTR1P38125 572 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms