RNA–Protein interactions for RNA: tW(CCA)P

tW(CCA)P, Transcript of Tryptophan tRNA (tRNA-Trp), predicted by tRNAscan-SE analysis, yeastyeast

Gene tW(CCA)P, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tW(CCA)PtW(CCA)P DBP3P20447 523 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P RPS1BP23248 255 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P RPI1P23250 407 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P HSP30P25619 332 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P EHD3P28817 500 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P DEP1P31385 405 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P GSH1P32477 678 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P NAB2P32505 525 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
tW(CCA)PtW(CCA)P HBS1P32769 611 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P TOA1P32773 286 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P ARC19P33204 171 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P MAE1P36013 669 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P IST2P38250 946 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P YGP1P38616 354 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P RFC3P38629 340 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P MNN9P39107 395 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P YMR144WP40214 342 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P IDP2P41939 412 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P YGR201CP42936 225 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P QRI1P43123 477 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P YFL051CP43552 160 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P ACS2P52910 683 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P BRR6P53062 197 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P USE1P53146 245 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P YGR126WP53274 230 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P ELA1P53861 379 aaPredicted RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P RHO5P53879 331 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P DMA2P53924 522 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P TPS1Q00764 495 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P KAP120Q02932 1032 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P FMN1Q03778 218 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P URC2Q04411 772 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P COQ11Q05892 277 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P HRI1Q05905 244 aaKnown RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P ATG26Q06321 1198 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P YLR413WQ06689 675 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P VPS36Q06696 566 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P MFG1Q07684 458 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P TMC1Q08422 150 aaPredicted RBP2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P HNT3Q08702 217 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P YDL109CQ12103 647 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P MCP1Q12106 302 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P NCE102Q12207 173 aaRIP-Chip data2.34□□□□□ -2.03not detected
tW(CCA)PtW(CCA)P RNH203Q12338 110 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P RTN2Q12443 393 aa2.34□□□□□ -2.03
tW(CCA)PtW(CCA)P ATP6P00854 259 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P RHO1P06780 209 aaKnown RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P PUT2P07275 575 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P RPL35AP0CX84 120 aaKnown RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P RPL35BP0CX85 120 aaKnown RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P PBN1P25580 416 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P RPN2P32565 945 aaKnown RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P SOF1P33750 489 aaKnown RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P PEX6P33760 1030 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P SWH1P35845 1188 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P CUE2P36075 443 aaKnown RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P MAL32P38158 584 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P GDT1P38301 280 aaPredicted RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P YMR262WP38430 313 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P MGE1P38523 228 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P PRS3P38689 320 aaKnown RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P SKN7P38889 622 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P YIL165CP40446 119 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P IRC7P43623 340 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P PCP1P53259 346 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P MEP3P53390 489 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P SNF12P53628 566 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P TEX1P53851 422 aaKnown RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P MOT3P54785 490 aaKnown RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P NAN1Q02931 896 aaKnown RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P MMT1Q03218 510 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P HSP31Q04432 237 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P EMG1Q06287 252 aaKnown RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P SWA2Q06677 668 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P MRL1Q06815 381 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P RSC58Q07979 502 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P NTG2Q08214 380 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P ENB1Q08299 606 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P MUM3Q08750 479 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P FMP40Q08968 688 aaPredicted RBP2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P YDL176WQ12027 708 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P NSL1Q12143 216 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P YOR214CQ12282 236 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P YDL180WQ12301 547 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P SET6Q12529 373 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P YBL029C-AQ3E756 94 aa2.33□□□□□ -2.04
tW(CCA)PtW(CCA)P CDC36P06100 191 aaPredicted RBP2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P SUI3P09064 285 aaKnown RBP2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P PRB1P09232 635 aa2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P RPS16AP0CX51 143 aaKnown RBP2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P RPS16BP0CX52 143 aaKnown RBP2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P RNA1P11745 407 aaKnown RBP2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P YPK2P18961 677 aa2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P RPB8P20436 146 aa2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P UTR1P21373 530 aa2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P CPR2P23285 205 aa2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P GIT1P25346 518 aa2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P YCR100CP25606 316 aa2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P PEX3P28795 441 aa2.32□□□□□ -2.04
tW(CCA)PtW(CCA)P NTG1P31378 399 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms