RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	USB1	Q12208	290 aa	Known RBP	4.77	□□□□□ -1.65
GDB1	YPR184W	RTN2	Q12443	393 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	PHO85	P17157	305 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	RRP7	P25368	297 aa	Predicted RBP	4.77	□□□□□ -1.65
GDB1	YPR184W	MET22	P32179	357 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	SKG1	P36169	355 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	JLP2	P40206	208 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	CTK1	Q03957	528 aa	Known RBP	4.77	□□□□□ -1.65
GDB1	YPR184W	SYO1	Q07395	620 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	FCY22	Q12119	530 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	LYS21	Q12122	440 aa	Known RBP	4.77	□□□□□ -1.65
GDB1	YPR184W	GAL3	P13045	520 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	SKN7	P38889	622 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	YIL067C	P40514	678 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	STB1	P42845	420 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	PMT4	P46971	762 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	COG1	P53079	417 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	CAB5	Q03941	241 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	BAS1	P22035	811 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	HXT2	P23585	541 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	ITR2	P30606	609 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	APL3	P38065	1025 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	EGD2	P38879	174 aa	Known RBP	4.77	□□□□□ -1.65
GDB1	YPR184W	BAT2	P47176	376 aa	Known RBP	4.77	□□□□□ -1.65
GDB1	YPR184W	PNG1	Q02890	363 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	ABZ2	Q03266	374 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	LPP1	Q04396	274 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	RQC1	Q05468	723 aa	Known RBP	4.77	□□□□□ -1.65
GDB1	YPR184W	WHI4	Q07655	649 aa	Known RBP	4.77	□□□□□ -1.65
GDB1	YPR184W	SDO1	Q07953	250 aa	Known RBP	4.77	□□□□□ -1.65
GDB1	YPR184W	YLR031W	Q07978	186 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	ATG40	Q99325	256 aa		4.77	□□□□□ -1.65
GDB1	YPR184W	RPL7A	P05737	244 aa	Known RBP	4.76	□□□□□ -1.65
GDB1	YPR184W	ERG3	P32353	365 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	BIO2	P32451	375 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	IML3	P38265	245 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	YDR089W	P38966	869 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	GIP2	P40036	548 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	RTS2	P40962	232 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	GAB1	P41733	394 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	YLR040C	Q07988	224 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	ENB1	Q08299	606 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	RPL7B	Q12213	244 aa	Known RBP	4.76	□□□□□ -1.65
GDB1	YPR184W	CAN1	P04817	590 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	HMG1	P12683	1054 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	DAP2	P18962	818 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
GDB1	YPR184W	CAT2	P32796	670 aa	Known RBP	4.76	□□□□□ -1.65
GDB1	YPR184W	GCS1	P35197	352 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	SER2	P42941	309 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	YFL052W	P43551	465 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	RSN1	Q03516	953 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	CDC42	P19073	191 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	SBA1	P28707	216 aa	Known RBP	4.76	□□□□□ -1.65
GDB1	YPR184W	YBR137W	P38276	179 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	FAD1	P38913	306 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	TES1	P41903	349 aa	Known RBP	4.76	□□□□□ -1.65
GDB1	YPR184W	SKP1	P52286	194 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	OKP1	P53298	406 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	YPL014W	Q02606	381 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	ROY1	Q04847	553 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	RRP40	Q08285	240 aa	Known RBP	4.76	□□□□□ -1.65
GDB1	YPR184W	CBF1	P17106	351 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	SLM4	P38247	162 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	PEX32	P38292	413 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	AIM46	P38885	310 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	UBX6	P47049	396 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	RTT103	Q05543	409 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	RBS1	Q05672	457 aa	Known RBP	4.76	□□□□□ -1.65
GDB1	YPR184W	FRE3	Q08905	711 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	PNS1	Q12412	539 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	TSC13	Q99190	310 aa		4.76	□□□□□ -1.65
GDB1	YPR184W	RPC40	P07703	335 aa	Known RBP	4.75	□□□□□ -1.65
GDB1	YPR184W	UTR2	P32623	467 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	ERG10	P41338	398 aa	Known RBP	4.75	□□□□□ -1.65
GDB1	YPR184W	RPE1	P46969	238 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	ECM27	P47144	725 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	YML096W	Q04489	525 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	HIP1	P06775	603 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	TRP4	P07285	380 aa	Predicted RBP	4.75	□□□□□ -1.65
GDB1	YPR184W	ALG7	P07286	448 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	PHO80	P20052	293 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	ERG1	P32476	496 aa	Known RBP	4.75	□□□□□ -1.65
GDB1	YPR184W	SHM1	P37292	490 aa	Predicted RBP	4.75	□□□□□ -1.65
GDB1	YPR184W	BNA4	P38169	460 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	IRC22	P40006	225 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	NUP57	P48837	541 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	AMA1	P50082	593 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	SWS2	P53937	143 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	BRE4	Q07660	1125 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	IRC10	Q08118	586 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	YPL272C	Q08984	517 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	TMA46	Q12000	345 aa	Known RBP	4.75	□□□□□ -1.65
GDB1	YPR184W	UPC2	Q12151	913 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	BI3	Q9ZZW7	517 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	LAA1	P39526	2014 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	RPS17A	P02407	136 aa	Known RBP	4.75	□□□□□ -1.65
GDB1	YPR184W	RPS17B	P14127	136 aa	Known RBP	4.75	□□□□□ -1.65
GDB1	YPR184W	OCA4	P25366	362 aa		4.75	□□□□□ -1.65
GDB1	YPR184W	ARO7	P32178	256 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms