RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W GAT3Q07928 141 aa3.52□□□□□ -1.85
VPS27YNR006W SAM4Q08985 325 aaKnown RBP3.52□□□□□ -1.85
VPS27YNR006W YOP1Q12402 180 aa3.52□□□□□ -1.85
VPS27YNR006W RRI1Q12468 440 aa3.52□□□□□ -1.85
VPS27YNR006W PGK1P00560 416 aaKnown RBP3.52□□□□□ -1.85
VPS27YNR006W ATP1P07251 545 aaKnown RBP3.52□□□□□ -1.85
VPS27YNR006W SSC1P0CS90 654 aaKnown RBP3.52□□□□□ -1.85
VPS27YNR006W ARF2P19146 181 aaKnown RBP3.52□□□□□ -1.85
VPS27YNR006W PTP1P25044 335 aa3.52□□□□□ -1.85
VPS27YNR006W PBN1P25580 416 aa3.52□□□□□ -1.85
VPS27YNR006W FRE2P36033 711 aa3.52□□□□□ -1.85
VPS27YNR006W DTR1P38125 572 aa3.52□□□□□ -1.85
VPS27YNR006W MAL32P38158 584 aa3.52□□□□□ -1.85
VPS27YNR006W APD1P38281 316 aa3.52□□□□□ -1.85
VPS27YNR006W SLX1P38324 304 aa3.52□□□□□ -1.85
VPS27YNR006W HIT1P46973 164 aa3.52□□□□□ -1.85
VPS27YNR006W MRX5P47007 382 aa3.52□□□□□ -1.85
VPS27YNR006W SEH1P53011 349 aaKnown RBP3.52□□□□□ -1.85
VPS27YNR006W LST7P53237 242 aa3.52□□□□□ -1.85
VPS27YNR006W MAL12P53341 584 aa3.52□□□□□ -1.85
VPS27YNR006W COS1P53822 381 aa3.52□□□□□ -1.85
VPS27YNR006W SAM50P53969 484 aa3.52□□□□□ -1.85
VPS27YNR006W REX2P54964 269 aaKnown RBP3.52□□□□□ -1.85
VPS27YNR006W BNA7Q04066 261 aa3.52□□□□□ -1.85
VPS27YNR006W PLP2Q12017 286 aa3.52□□□□□ -1.85
VPS27YNR006W SLF1Q12034 447 aaKnown RBP3.52□□□□□ -1.85
VPS27YNR006W GET4Q12125 312 aa3.52□□□□□ -1.85
VPS27YNR006W BSC1Q12140 328 aa3.52□□□□□ -1.85
VPS27YNR006W MSH5Q12175 901 aa3.52□□□□□ -1.85
VPS27YNR006W DET1Q99288 334 aaKnown RBP3.52□□□□□ -1.85
VPS27YNR006W COQ1P18900 473 aa3.51□□□□□ -1.85
VPS27YNR006W MNS1P32906 549 aa3.51□□□□□ -1.85
VPS27YNR006W GPX2P38143 162 aa3.51□□□□□ -1.85
VPS27YNR006W PFS1P38872 237 aa3.51□□□□□ -1.85
VPS27YNR006W IRC7P43623 340 aa3.51□□□□□ -1.85
VPS27YNR006W HSH155P49955 971 aaKnown RBP3.51□□□□□ -1.85
VPS27YNR006W AZR1P50080 613 aa3.51□□□□□ -1.85
VPS27YNR006W TRM112P53738 135 aaPredicted RBP3.51□□□□□ -1.85
VPS27YNR006W HER2Q03557 464 aa3.51□□□□□ -1.85
VPS27YNR006W BET5Q03630 159 aa3.51□□□□□ -1.85
VPS27YNR006W CSM3Q04659 317 aa3.51□□□□□ -1.85
VPS27YNR006W BER1Q06688 274 aaKnown RBP3.51□□□□□ -1.85
VPS27YNR006W PBP4Q07362 185 aaKnown RBP3.51□□□□□ -1.85
VPS27YNR006W YLR112WQ12130 139 aa3.51□□□□□ -1.85
VPS27YNR006W NCA2Q12374 616 aa3.51□□□□□ -1.85
VPS27YNR006W ARP6Q12509 438 aa3.51□□□□□ -1.85
VPS27YNR006W YBL111CQ3E7Y5 667 aa3.51□□□□□ -1.85
VPS27YNR006W IKI3Q06706 1349 aaKnown RBP3.51□□□□□ -1.85
VPS27YNR006W ATP6P00854 259 aa3.5□□□□□ -1.85
VPS27YNR006W TUB1P09733 447 aaKnown RBP3.5□□□□□ -1.85
VPS27YNR006W ZRC1P20107 442 aa3.5□□□□□ -1.85
VPS27YNR006W MRPL8P22353 238 aa3.5□□□□□ -1.85
VPS27YNR006W YCR100CP25606 316 aa3.5□□□□□ -1.85
VPS27YNR006W MKK1P32490 508 aa3.5□□□□□ -1.85
VPS27YNR006W ECM15P35195 104 aa3.5□□□□□ -1.85
VPS27YNR006W HOT13P36078 116 aa3.5□□□□□ -1.85
VPS27YNR006W RTC3P38804 111 aaPredicted RBP3.5□□□□□ -1.85
VPS27YNR006W VPS52P39904 641 aa3.5□□□□□ -1.85
VPS27YNR006W VRG4P40107 337 aa3.5□□□□□ -1.85
VPS27YNR006W ESBP6P53918 673 aa3.5□□□□□ -1.85
VPS27YNR006W YAP7Q08182 245 aa3.5□□□□□ -1.85
VPS27YNR006W ALE1Q08548 619 aa3.5□□□□□ -1.85
VPS27YNR006W YPQ1Q12010 308 aa3.5□□□□□ -1.85
VPS27YNR006W APC9Q12107 265 aa3.5□□□□□ -1.85
VPS27YNR006W SET6Q12529 373 aa3.5□□□□□ -1.85
VPS27YNR006W MON2P48563 1636 aaPredicted RBP3.5□□□□□ -1.85
VPS27YNR006W PAB1P04147 577 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
VPS27YNR006W CDC33P07260 213 aaKnown RBP3.5□□□□□ -1.85
VPS27YNR006W NHP6BP11633 99 aaKnown RBP3.5□□□□□ -1.85
VPS27YNR006W RPO26P20435 155 aa3.5□□□□□ -1.85
VPS27YNR006W PUT3P25502 979 aaPredicted RBP3.5□□□□□ -1.85
VPS27YNR006W DCC1P25559 380 aa3.5□□□□□ -1.85
VPS27YNR006W ILV6P25605 309 aaKnown RBP3.5□□□□□ -1.85
VPS27YNR006W MCR1P36060 302 aaKnown RBP3.5□□□□□ -1.85
VPS27YNR006W RTS2P40962 232 aa3.5□□□□□ -1.85
VPS27YNR006W RTT101P47050 842 aa3.5□□□□□ -1.85
VPS27YNR006W CUS2P53830 285 aaPredicted RBP3.5□□□□□ -1.85
VPS27YNR006W SPR6Q01684 191 aa3.5□□□□□ -1.85
VPS27YNR006W YPL080CQ02826 108 aa3.5□□□□□ -1.85
VPS27YNR006W ADH6Q04894 360 aaKnown RBP3.5□□□□□ -1.85
VPS27YNR006W OSW1Q08692 278 aa3.5□□□□□ -1.85
VPS27YNR006W YAR066WP0CX18 203 aa3.49□□□□□ -1.85
VPS27YNR006W YHR214WP0CX19 203 aa3.49□□□□□ -1.85
VPS27YNR006W HEM15P16622 393 aa3.49□□□□□ -1.85
VPS27YNR006W VPS1P21576 704 aaKnown RBP3.49□□□□□ -1.85
VPS27YNR006W DAL82P21705 255 aa3.49□□□□□ -1.85
VPS27YNR006W TIP1P27654 210 aaPredicted RBP3.49□□□□□ -1.85
VPS27YNR006W COQ3P27680 312 aa3.49□□□□□ -1.85
VPS27YNR006W PPA2P28239 310 aa3.49□□□□□ -1.85
VPS27YNR006W ERG9P29704 444 aa3.49□□□□□ -1.85
VPS27YNR006W ACB1P31787 87 aa3.49□□□□□ -1.85
VPS27YNR006W SMF2P38778 549 aa3.49□□□□□ -1.85
VPS27YNR006W TIS11P47977 285 aa3.49□□□□□ -1.85
VPS27YNR006W SED5Q01590 340 aa3.49□□□□□ -1.85
VPS27YNR006W NUP116Q02630 1113 aa3.49□□□□□ -1.85
VPS27YNR006W ODC1Q03028 310 aa3.49□□□□□ -1.85
VPS27YNR006W SPO77Q06134 477 aa3.49□□□□□ -1.85
VPS27YNR006W HSL1P34244 1518 aa3.49□□□□□ -1.85
VPS27YNR006W TEF1P02994 458 aaKnown RBP3.48□□□□□ -1.85
VPS27YNR006W HPR1P17629 752 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms