RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C SPT20P50875 604 aa8.06□□□□□ -1.12
RPD3YNL330C RHO4Q00246 291 aa8.06□□□□□ -1.12
RPD3YNL330C EAR1Q03212 550 aa8.06□□□□□ -1.12
RPD3YNL330C OST6Q03723 332 aa8.06□□□□□ -1.12
RPD3YNL330C RRP9Q06506 573 aaKnown RBP8.06□□□□□ -1.12
RPD3YNL330C IPK1Q06667 281 aa8.06□□□□□ -1.12
RPD3YNL330C XYL2Q07993 356 aa8.06□□□□□ -1.12
RPD3YNL330C TY1A-NL1Q12391 440 aaKnown RBP8.06□□□□□ -1.12
RPD3YNL330C YBR298C-AQ8TGK4 73 aa8.06□□□□□ -1.12
RPD3YNL330C FLP1P03870 423 aa8.05□□□□□ -1.12
RPD3YNL330C SPS2P08459 502 aa8.05□□□□□ -1.12
RPD3YNL330C YGL041W-AP0C5N3 154 aa8.05□□□□□ -1.12
RPD3YNL330C FPR1P20081 114 aaKnown RBP8.05□□□□□ -1.12
RPD3YNL330C NIC96P34077 839 aa8.05□□□□□ -1.12
RPD3YNL330C DOA1P36037 715 aa8.05□□□□□ -1.12
RPD3YNL330C SNU114P36048 1008 aaKnown RBP8.05□□□□□ -1.12
RPD3YNL330C YKL151CP36059 337 aa8.05□□□□□ -1.12
RPD3YNL330C TRM7P38238 310 aaKnown RBP8.05□□□□□ -1.12
RPD3YNL330C RGA1P39083 1007 aa8.05□□□□□ -1.12
RPD3YNL330C HPA3P39979 161 aa8.05□□□□□ -1.12
RPD3YNL330C VRG4P40107 337 aa8.05□□□□□ -1.12
RPD3YNL330C AAD14P42884 376 aa8.05□□□□□ -1.12
RPD3YNL330C ERG26P53199 349 aaKnown RBP8.05□□□□□ -1.12
RPD3YNL330C YGR067CP53243 804 aa8.05□□□□□ -1.12
RPD3YNL330C SYF2P53277 215 aaPredicted RBP8.05□□□□□ -1.12
RPD3YNL330C ERV29P53337 310 aa8.05□□□□□ -1.12
RPD3YNL330C NGL2Q03264 515 aaKnown RBP8.05□□□□□ -1.12
RPD3YNL330C MLC2Q06580 163 aa8.05□□□□□ -1.12
RPD3YNL330C YOR283WQ12040 230 aaKnown RBP8.05□□□□□ -1.12
RPD3YNL330C PUS9Q12069 462 aa8.05□□□□□ -1.12
RPD3YNL330C YOR114WQ12219 294 aa8.05□□□□□ -1.12
RPD3YNL330C YOL114CQ12322 202 aa8.05□□□□□ -1.12
RPD3YNL330C FMP16Q12497 93 aa8.05□□□□□ -1.12
RPD3YNL330C SKS1Q12505 502 aa8.05□□□□□ -1.12
RPD3YNL330C MTR10Q99189 972 aa8.05□□□□□ -1.12
RPD3YNL330C PNO1Q99216 274 aaKnown RBP8.05□□□□□ -1.12
RPD3YNL330C HRP1Q99383 534 aaKnown RBP8.05□□□□□ -1.12
RPD3YNL330C PEP4P07267 405 aaKnown RBP8.04□□□□□ -1.12
RPD3YNL330C SEC12P11655 471 aa8.04□□□□□ -1.12
RPD3YNL330C PRP28P23394 588 aa8.04□□□□□ -1.12
RPD3YNL330C SNC1P31109 117 aa8.04□□□□□ -1.12
RPD3YNL330C TMA19P35691 167 aaKnown RBP8.04□□□□□ -1.12
RPD3YNL330C SHE2P36068 246 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
RPD3YNL330C GLY1P37303 387 aaKnown RBP8.04□□□□□ -1.12
RPD3YNL330C CCZ1P38273 704 aa8.04□□□□□ -1.12
RPD3YNL330C CHL4P38907 458 aa8.04□□□□□ -1.12
RPD3YNL330C PLM2Q04383 521 aa8.04□□□□□ -1.12
RPD3YNL330C TPO3Q06451 622 aa8.04□□□□□ -1.12
RPD3YNL330C ENV7Q12003 364 aa8.04□□□□□ -1.12
RPD3YNL330C YDL176WQ12027 708 aa8.04□□□□□ -1.12
RPD3YNL330C TPO4Q12256 659 aa8.04□□□□□ -1.12
RPD3YNL330C ATG31Q12421 196 aa8.04□□□□□ -1.12
RPD3YNL330C YDL007C-AQ2V2Q0 85 aa8.04□□□□□ -1.12
RPD3YNL330C YKL033W-AQ86ZR7 236 aa8.04□□□□□ -1.12
RPD3YNL330C CMP2P14747 604 aa8.03□□□□□ -1.12
RPD3YNL330C HOP1P20050 605 aa8.03□□□□□ -1.12
RPD3YNL330C PHO80P20052 293 aa8.03□□□□□ -1.12
RPD3YNL330C FPS1P23900 669 aa8.03□□□□□ -1.12
RPD3YNL330C ERG1P32476 496 aaKnown RBP8.03□□□□□ -1.12
RPD3YNL330C PUB1P32588 453 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
RPD3YNL330C RPC34P32910 317 aa8.03□□□□□ -1.12
RPD3YNL330C MSN2P33748 704 aa8.03□□□□□ -1.12
RPD3YNL330C DED81P38707 554 aaKnown RBP8.03□□□□□ -1.12
RPD3YNL330C MED6P38782 295 aa8.03□□□□□ -1.12
RPD3YNL330C PHM8P40025 321 aa8.03□□□□□ -1.12
RPD3YNL330C YGL101WP53144 215 aa8.03□□□□□ -1.12
RPD3YNL330C YKR011CQ02209 353 aa8.03□□□□□ -1.12
RPD3YNL330C ISU1Q03020 165 aa8.03□□□□□ -1.12
RPD3YNL330C MSS11Q03825 758 aa8.03□□□□□ -1.12
RPD3YNL330C YLR283WQ05867 314 aa8.03□□□□□ -1.12
RPD3YNL330C SKI7Q08491 747 aaPredicted RBP8.03□□□□□ -1.12
RPD3YNL330C SPC3Q12133 184 aa8.03□□□□□ -1.12
RPD3YNL330C QCR7P00128 127 aa8.03□□□□□ -1.12
RPD3YNL330C HIP1P06775 603 aa8.03□□□□□ -1.12
RPD3YNL330C RAD52P06778 471 aaKnown RBP8.03□□□□□ -1.12
RPD3YNL330C MOD5P07884 428 aa8.03□□□□□ -1.12
RPD3YNL330C YOL162WP0CF19 215 aa8.03□□□□□ -1.12
RPD3YNL330C DPM1P14020 267 aaKnown RBP8.03□□□□□ -1.12
RPD3YNL330C RPB5P20434 215 aa8.03□□□□□ -1.12
RPD3YNL330C YCK1P23291 538 aa8.03□□□□□ -1.12
RPD3YNL330C KRE6P32486 720 aa8.03□□□□□ -1.12
RPD3YNL330C ARC19P33204 171 aaKnown RBP8.03□□□□□ -1.12
RPD3YNL330C MRPL3P36516 390 aa8.03□□□□□ -1.12
RPD3YNL330C NAT2P37293 288 aa8.03□□□□□ -1.12
RPD3YNL330C TAT1P38085 619 aa8.03□□□□□ -1.12
RPD3YNL330C NEM1P38757 446 aa8.03□□□□□ -1.12
RPD3YNL330C YHR097CP38809 366 aaKnown RBP8.03□□□□□ -1.12
RPD3YNL330C YEL068CP39977 110 aa8.03□□□□□ -1.12
RPD3YNL330C YIL165CP40446 119 aa8.03□□□□□ -1.12
RPD3YNL330C CIN1P40987 1014 aa8.03□□□□□ -1.12
RPD3YNL330C IDS2P46958 469 aa8.03□□□□□ -1.12
RPD3YNL330C TIM54P47045 478 aa8.03□□□□□ -1.12
RPD3YNL330C HOS2P53096 452 aaPredicted RBP8.03□□□□□ -1.12
RPD3YNL330C YPL068CQ02749 293 aa8.03□□□□□ -1.12
RPD3YNL330C ELP4Q02884 456 aaKnown RBP8.03□□□□□ -1.12
RPD3YNL330C PLB2Q03674 706 aa8.03□□□□□ -1.12
RPD3YNL330C YMR130WQ04223 302 aa8.03□□□□□ -1.12
RPD3YNL330C YMR315WQ04869 349 aaKnown RBP8.03□□□□□ -1.12
RPD3YNL330C MRPL35Q06678 367 aa8.03□□□□□ -1.12
RPD3YNL330C FDH1Q08911 376 aa8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms