RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	AIM24	P47127	394 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	GCV1	P48015	400 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	NIF3	P53081	288 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	ERG13	P54839	491 aa	Known RBP	2.35	□□□□□ -2.03
TOP2	YNL088W	SRT1	Q03175	343 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	RAD34	Q06665	692 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	FCY22	Q12119	530 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	YPR022C	Q12139	1133 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	RMD5	Q12508	421 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	CHO2	P05374	869 aa	Known RBP	2.35	□□□□□ -2.03
TOP2	YNL088W	RPO26	P20435	155 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	FUN26	P31381	517 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	IES6	P32617	166 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	NTR2	P36118	322 aa	Predicted RBP	2.35	□□□□□ -2.03
TOP2	YNL088W	SHG1	P38337	142 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	DIA4	P38705	446 aa	Predicted RBP	2.35	□□□□□ -2.03
TOP2	YNL088W	YAR028W	P39548	234 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	LCP5	P40079	357 aa	Predicted RBP	2.35	□□□□□ -2.03
TOP2	YNL088W	COA1	P40452	197 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	PMT6	P42934	759 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	CIN2	P46670	268 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	YJR141W	P47172	347 aa	Predicted RBP	2.35	□□□□□ -2.03
TOP2	YNL088W	YPR003C	P53394	754 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	DIG1	Q03063	452 aa	Known RBP	2.35	□□□□□ -2.03
TOP2	YNL088W	PLM2	Q04383	521 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	LDB18	Q07887	179 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	BUD20	Q08004	166 aa	Predicted RBP	2.35	□□□□□ -2.03
TOP2	YNL088W	PLB3	Q08108	686 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	TRM3	Q07527	1436 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	MOD5	P07884	428 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	CUP2	P15315	225 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	CPT1	P17898	393 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	ART10	P18634	518 aa	Known RBP	2.35	□□□□□ -2.03
TOP2	YNL088W	IDP1	P21954	428 aa	Known RBP	2.35	□□□□□ -2.03
TOP2	YNL088W	FUB1	P25659	250 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	RRN10	P38204	145 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	UBP5	P39944	805 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	CSM2	P40465	213 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	GUF1	P46943	645 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	ILM1	P47155	203 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	YNR040W	P53736	256 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	RNY1	Q02933	434 aa	Known RBP	2.35	□□□□□ -2.03
TOP2	YNL088W	YDL086W	Q07505	273 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	RKM5	Q12367	367 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	POM34	Q12445	299 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	YOR1	P53049	1477 aa		2.35	□□□□□ -2.03
TOP2	YNL088W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.34	□□□□□ -2.03	not detected
TOP2	YNL088W	UBC8	P28263	218 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	SCO2	P38072	301 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	ECM13	P38195	257 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	FMP23	P38231	175 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	GPI16	P38875	610 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	PAC2	P39937	518 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	FMP52	P40008	231 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	YIR016W	P40572	265 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	TAX4	P47030	604 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	JHD2	P47156	728 aa	Predicted RBP	2.34	□□□□□ -2.03
TOP2	YNL088W	SEH1	P53011	349 aa	Known RBP	2.34	□□□□□ -2.03
TOP2	YNL088W	YKR011C	Q02209	353 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	OST6	Q03723	332 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	RGC1	Q06108	1083 aa	Known RBP	2.34	□□□□□ -2.03
TOP2	YNL088W	YNG1	Q08465	219 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	NSP1	P14907	823 aa	Known RBP	2.34	□□□□□ -2.03
TOP2	YNL088W	URK1	P27515	501 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	YSC83	P32792	385 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	FLO10	P36170	1169 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	SDH8	P38345	138 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	QNS1	P38795	714 aa	Known RBP	2.34	□□□□□ -2.03
TOP2	YNL088W	YHR122W	P38829	231 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	BDH2	P39713	417 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	MTL1	P53214	551 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	YGR168C	P53293	376 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	TPS1	Q00764	495 aa	Known RBP	2.34	□□□□□ -2.03
TOP2	YNL088W	NRG1	Q03125	231 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	YMR160W	Q03823	816 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	RSA3	Q05942	220 aa	Known RBP	2.34	□□□□□ -2.03
TOP2	YNL088W	MRPL51	Q06090	140 aa	Predicted RBP	2.34	□□□□□ -2.03
TOP2	YNL088W	FRQ1	Q06389	190 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	AFT2	Q08957	416 aa		2.34	□□□□□ -2.03
TOP2	YNL088W	PDR18	P53756	1333 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	ARG82	P07250	355 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	SPS4	P09937	338 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	URA6	P15700	204 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	FEN2	P25621	512 aa	Known RBP	2.34	□□□□□ -2.04
TOP2	YNL088W	ASG7	P46993	209 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	SKP1	P52286	194 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	AIM34	Q03673	198 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	SIA1	Q12212	622 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	YOR114W	Q12219	294 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	REV3	P14284	1504 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	TCB3	Q03640	1545 aa	Known RBP	2.34	□□□□□ -2.04
TOP2	YNL088W	CBP6	P07253	162 aa	Predicted RBP	2.34	□□□□□ -2.04
TOP2	YNL088W	PYC1	P11154	1178 aa	Known RBP	2.34	□□□□□ -2.04
TOP2	YNL088W	AMD1	P15274	810 aa	Known RBP	2.34	□□□□□ -2.04
TOP2	YNL088W	PRE7	P23724	241 aa	Known RBP	2.34	□□□□□ -2.04
TOP2	YNL088W	RSA4	P25382	515 aa	Known RBP	2.34	□□□□□ -2.04
TOP2	YNL088W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.34	□□□□□ -2.04	not detected
TOP2	YNL088W	YBR144C	P34215	104 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	MRPL16	P38064	232 aa		2.34	□□□□□ -2.04
TOP2	YNL088W	EHT1	P38295	451 aa		2.34	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms