RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W NOP13P53883 403 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
CSM3YMR048W ALF1P53904 254 aa3.26□□□□□ -1.89
CSM3YMR048W YNL134CP53912 376 aaKnown RBP3.26□□□□□ -1.89
CSM3YMR048W HXT11P54862 567 aa3.26□□□□□ -1.89
CSM3YMR048W YLR456WQ06199 204 aa3.26□□□□□ -1.89
CSM3YMR048W SUE1Q06524 206 aa3.26□□□□□ -1.89
CSM3YMR048W YPR078CQ06813 372 aa3.26□□□□□ -1.89
CSM3YMR048W APC5Q08683 685 aa3.26□□□□□ -1.89
CSM3YMR048W DST1P07273 309 aa3.25□□□□□ -1.89
CSM3YMR048W IMA3P0CW40 589 aa3.25□□□□□ -1.89
CSM3YMR048W IMA4P0CW41 589 aa3.25□□□□□ -1.89
CSM3YMR048W PHO13P19881 312 aa3.25□□□□□ -1.89
CSM3YMR048W MNS1P32906 549 aa3.25□□□□□ -1.89
CSM3YMR048W MDL1P33310 695 aa3.25□□□□□ -1.89
CSM3YMR048W UTH1P36135 365 aa3.25□□□□□ -1.89
CSM3YMR048W MRP21P38175 177 aa3.25□□□□□ -1.89
CSM3YMR048W GAT2P40209 560 aa3.25□□□□□ -1.89
CSM3YMR048W TOM22P49334 152 aa3.25□□□□□ -1.89
CSM3YMR048W STD1Q02794 444 aa3.25□□□□□ -1.89
CSM3YMR048W MMT1Q03218 510 aa3.25□□□□□ -1.89
CSM3YMR048W EBS1Q03466 884 aaKnown RBP3.25□□□□□ -1.89
CSM3YMR048W IMA2Q08295 589 aa3.25□□□□□ -1.89
CSM3YMR048W IES4Q08561 116 aa3.25□□□□□ -1.89
CSM3YMR048W UAF30Q08747 228 aa3.25□□□□□ -1.89
CSM3YMR048W FDH1Q08911 376 aa3.25□□□□□ -1.89
CSM3YMR048W RPN5Q12250 445 aaKnown RBP3.25□□□□□ -1.89
CSM3YMR048W COX3P00420 269 aa3.24□□□□□ -1.89
CSM3YMR048W TRP1P00912 224 aa3.24□□□□□ -1.89
CSM3YMR048W RPS3P05750 240 aaKnown RBP3.24□□□□□ -1.89
CSM3YMR048W MAS2P11914 482 aa3.24□□□□□ -1.89
CSM3YMR048W VPH1P32563 840 aaKnown RBP3.24□□□□□ -1.89
CSM3YMR048W SWI3P32591 825 aa3.24□□□□□ -1.89
CSM3YMR048W YEL043WP32618 956 aa3.24□□□□□ -1.89
CSM3YMR048W UIP5P36137 443 aa3.24□□□□□ -1.89
CSM3YMR048W SHE3P38272 425 aaKnown RBP3.24□□□□□ -1.89
CSM3YMR048W MSG5P38590 489 aa3.24□□□□□ -1.89
CSM3YMR048W SPT8P38915 602 aa3.24□□□□□ -1.89
CSM3YMR048W CAJ1P39101 391 aa3.24□□□□□ -1.89
CSM3YMR048W JEM1P40358 645 aa3.24□□□□□ -1.89
CSM3YMR048W EFM4P40516 257 aa3.24□□□□□ -1.89
CSM3YMR048W TOS3P43637 560 aa3.24□□□□□ -1.89
CSM3YMR048W SFH5P47008 294 aa3.24□□□□□ -1.89
CSM3YMR048W HOP2P53187 214 aa3.24□□□□□ -1.89
CSM3YMR048W RHO5P53879 331 aaKnown RBP3.24□□□□□ -1.89
CSM3YMR048W RPN9Q04062 393 aaKnown RBP3.24□□□□□ -1.89
CSM3YMR048W YMR321CQ04898 105 aa3.24□□□□□ -1.89
CSM3YMR048W NDE2Q07500 545 aa3.24□□□□□ -1.89
CSM3YMR048W SRL2Q12020 392 aa3.24□□□□□ -1.89
CSM3YMR048W RUP1Q12242 671 aa3.24□□□□□ -1.89
CSM3YMR048W YRM1Q12340 786 aa3.24□□□□□ -1.89
CSM3YMR048W GIS3Q12418 502 aa3.24□□□□□ -1.89
CSM3YMR048W MYO1P08964 1928 aa3.24□□□□□ -1.89
CSM3YMR048W PCL1P24867 279 aa3.23□□□□□ -1.89
CSM3YMR048W PHO91P27514 894 aa3.23□□□□□ -1.89
CSM3YMR048W SRB4P32569 687 aa3.23□□□□□ -1.89
CSM3YMR048W MID2P36027 376 aa3.23□□□□□ -1.89
CSM3YMR048W INM1P38710 295 aa3.23□□□□□ -1.89
CSM3YMR048W AIP1P46680 615 aaKnown RBP3.23□□□□□ -1.89
CSM3YMR048W NBP1P52919 319 aaPredicted RBP3.23□□□□□ -1.89
CSM3YMR048W CWC25P53854 179 aaKnown RBP3.23□□□□□ -1.89
CSM3YMR048W YNL146WP53906 100 aa3.23□□□□□ -1.89
CSM3YMR048W TIM8P57744 87 aa3.23□□□□□ -1.89
CSM3YMR048W URH1Q04179 340 aa3.23□□□□□ -1.89
CSM3YMR048W BCH1Q05029 724 aa3.23□□□□□ -1.89
CSM3YMR048W YLR297WQ05899 129 aa3.23□□□□□ -1.89
CSM3YMR048W RRP9Q06506 573 aaKnown RBP3.23□□□□□ -1.89
CSM3YMR048W DNL4Q08387 944 aaPredicted RBP3.23□□□□□ -1.89
CSM3YMR048W TAF10Q12030 206 aa3.23□□□□□ -1.89
CSM3YMR048W DAS2Q12084 232 aa3.23□□□□□ -1.89
CSM3YMR048W RPS8AP0CX39 200 aaKnown RBP3.22□□□□□ -1.89
CSM3YMR048W RPS8BP0CX40 200 aaKnown RBP3.22□□□□□ -1.89
CSM3YMR048W NAM2P11325 894 aa3.22□□□□□ -1.89
CSM3YMR048W VPS3P23643 1011 aa3.22□□□□□ -1.89
CSM3YMR048W YCL068CP25593 260 aa3.22□□□□□ -1.89
CSM3YMR048W PSO2P30620 661 aa3.22□□□□□ -1.89
CSM3YMR048W RRP1P35178 278 aaPredicted RBP3.22□□□□□ -1.89
CSM3YMR048W CHK1P38147 527 aa3.22□□□□□ -1.89
CSM3YMR048W YBR137WP38276 179 aa3.22□□□□□ -1.89
CSM3YMR048W STN1P38960 494 aa3.22□□□□□ -1.89
CSM3YMR048W SHQ1P40486 507 aaPredicted RBP3.22□□□□□ -1.89
CSM3YMR048W ROG1P53118 685 aa3.22□□□□□ -1.89
CSM3YMR048W MTM1P53320 366 aa3.22□□□□□ -1.89
CSM3YMR048W YNL247WP53852 767 aaKnown RBP3.22□□□□□ -1.89
CSM3YMR048W CWC21Q03375 135 aaKnown RBP3.22□□□□□ -1.89
CSM3YMR048W VPS60Q03390 229 aa3.22□□□□□ -1.89
CSM3YMR048W CCE1Q03702 353 aa3.22□□□□□ -1.89
CSM3YMR048W TPT1Q12272 230 aaKnown RBP3.22□□□□□ -1.89
CSM3YMR048W CDC33P07260 213 aaKnown RBP3.21□□□□□ -1.9
CSM3YMR048W HSP26P15992 214 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
CSM3YMR048W CKI1P20485 582 aa3.21□□□□□ -1.9
CSM3YMR048W SLM5P25345 492 aaKnown RBP3.21□□□□□ -1.9
CSM3YMR048W COX13P32799 129 aa3.21□□□□□ -1.9
CSM3YMR048W YET1P35723 206 aa3.21□□□□□ -1.9
CSM3YMR048W BLI1P35727 113 aa3.21□□□□□ -1.9
CSM3YMR048W YHL026CP38740 315 aa3.21□□□□□ -1.9
CSM3YMR048W SEC28P40509 296 aaKnown RBP3.21□□□□□ -1.9
CSM3YMR048W YIL029CP40538 142 aa3.21□□□□□ -1.9
CSM3YMR048W YPS6P40583 537 aa3.21□□□□□ -1.9
CSM3YMR048W YJR054WP47114 497 aa3.21□□□□□ -1.9
CSM3YMR048W HSH155P49955 971 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms