RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT3	YKL146W	YPR172W	Q06608	200 aa		4.78	□□□□□ -1.64
AVT3	YKL146W	VPS36	Q06696	566 aa		4.78	□□□□□ -1.64
AVT3	YKL146W	NFI1	Q12216	726 aa		4.78	□□□□□ -1.64
AVT3	YKL146W	RPS21B	Q3E754	87 aa	Known RBP	4.78	□□□□□ -1.64
AVT3	YKL146W	FAS1	P07149	2051 aa	Known RBP	4.78	□□□□□ -1.64
AVT3	YKL146W	YCK1	P23291	538 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	YCR006C	P25350	157 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	ASF2	P32448	525 aa	Predicted RBP	4.77	□□□□□ -1.65
AVT3	YKL146W	RPS27A	P35997	82 aa	Known RBP	4.77	□□□□□ -1.65
AVT3	YKL146W	RPS27B	P38711	82 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	CTF8	P38877	133 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	YIL086C	P40503	102 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	IRC6	P43615	237 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	RET2	P43621	546 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	BIT61	P47041	543 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	NUP57	P48837	541 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	SLD3	P53135	668 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	COG5	P53951	403 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	BUD5	P25300	642 aa	Predicted RBP	4.77	□□□□□ -1.65
AVT3	YKL146W	MXR2	P25566	168 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	TOD6	P34219	525 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	YOR062C	P36025	268 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	AHP1	P38013	176 aa	Known RBP	4.77	□□□□□ -1.65
AVT3	YKL146W	FES1	P38260	290 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	MBP1	P39678	833 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	AVT6	P40074	448 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	PRE6	P40303	254 aa	Known RBP	4.77	□□□□□ -1.65
AVT3	YKL146W	MPC1	P53157	130 aa	Known RBP	4.77	□□□□□ -1.65
AVT3	YKL146W	SYF2	P53277	215 aa	Predicted RBP	4.77	□□□□□ -1.65
AVT3	YKL146W	SNF12	P53628	566 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	CTL1	Q03220	320 aa	Known RBP	4.77	□□□□□ -1.65
AVT3	YKL146W	YOR365C	Q08844	703 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	YDR061W	Q12298	539 aa		4.77	□□□□□ -1.65
AVT3	YKL146W	SEN1	Q00416	2231 aa	Known RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	SIR3	P06701	978 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	RPC40	P07703	335 aa	Known RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	MOD5	P07884	428 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	TAL1	P15019	335 aa	Known RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	MCK1	P21965	375 aa	Known RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	KAP122	P32767	1081 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	YLF2	P38746	405 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	NOP16	P40007	231 aa	Known RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	SOK1	P40317	901 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	SWP82	P43554	623 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	YPL068C	Q02749	293 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	ISU1	Q03020	165 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	SMA2	Q04658	369 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	YPR174C	Q06616	221 aa	Predicted RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	MED11	Q99278	115 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	YOL163W	P0CF20	169 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	RPS5	P26783	225 aa	Known RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	DCG1	P32460	244 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	NPL6	P32832	435 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	ECM4	P36156	370 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	ECM34	P38728	170 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	GOS1	P38736	223 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	SBE22	P38814	852 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	SOP4	P39543	234 aa	Predicted RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	VPS52	P39904	641 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	AST2	P39945	430 aa	Known RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	ISC1	P40015	477 aa	Known RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	YIL152W	P40455	235 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	UTP25	P40498	721 aa	Known RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	ALB1	P47019	175 aa	Predicted RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	APS3	P47064	194 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	TPC1	P53257	314 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	YGR266W	P53326	701 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	YSA1	Q01976	231 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	NOG1	Q02892	647 aa	Known RBP	4.76	□□□□□ -1.65
AVT3	YKL146W	YMD8	Q03697	442 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	TPP1	Q03796	238 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	YDR179W-A	Q03983	463 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	GUP2	Q08929	609 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	YOR214C	Q12282	236 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	YPL119C-A	Q3E751	87 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	VCX1	Q99385	411 aa		4.76	□□□□□ -1.65
AVT3	YKL146W	BRR2	P32639	2163 aa	Known RBP	4.75	□□□□□ -1.65
AVT3	YKL146W	GAL4	P04386	881 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	MET17	P06106	444 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	TFS1	P14306	219 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	GPI12	P23797	304 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	YKR015C	P36111	568 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	IFA38	P38286	347 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	YHR097C	P38809	366 aa	Known RBP	4.75	□□□□□ -1.65
AVT3	YKL146W	IPT1	P38954	527 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	SIT1	P39980	628 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	RRG9	P40156	214 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	GID8	P40208	455 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	ICE2	P40499	491 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	SPG5	P42933	373 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	TOS2	P50078	622 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	IMD4	P50094	524 aa	Known RBP	4.75	□□□□□ -1.65
AVT3	YKL146W	DBP6	P53734	629 aa	Known RBP	4.75	□□□□□ -1.65
AVT3	YKL146W	MOT3	P54785	490 aa	Known RBP	4.75	□□□□□ -1.65
AVT3	YKL146W	NAM8	Q00539	523 aa	Known RBP	4.75	□□□□□ -1.65
AVT3	YKL146W	INP1	Q03694	420 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	YLR345W	Q06137	509 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	PST2	Q12335	198 aa	Known RBP	4.75	□□□□□ -1.65
AVT3	YKL146W	YPR015C	Q12531	247 aa		4.75	□□□□□ -1.65
AVT3	YKL146W	SAM35	P14693	329 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms