RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W YKL097CP34245 136 aa3.59□□□□□ -1.83
PTM1YKL039W ZTA1P38230 334 aaKnown RBP3.59□□□□□ -1.83
PTM1YKL039W SPT8P38915 602 aa3.59□□□□□ -1.83
PTM1YKL039W VPS45P38932 577 aa3.59□□□□□ -1.83
PTM1YKL039W YIL029CP40538 142 aa3.59□□□□□ -1.83
PTM1YKL039W GAB1P41733 394 aa3.59□□□□□ -1.83
PTM1YKL039W LIF1P53150 421 aa3.59□□□□□ -1.83
PTM1YKL039W MTQ1P53944 314 aa3.59□□□□□ -1.83
PTM1YKL039W MMT1Q03218 510 aa3.59□□□□□ -1.83
PTM1YKL039W YPL150WQ12152 901 aa3.59□□□□□ -1.83
PTM1YKL039W IZH2Q12442 317 aa3.59□□□□□ -1.83
PTM1YKL039W RPO26P20435 155 aa3.59□□□□□ -1.84
PTM1YKL039W RME1P32338 300 aaKnown RBP3.59□□□□□ -1.84
PTM1YKL039W OLA1P38219 394 aaKnown RBP3.59□□□□□ -1.84
PTM1YKL039W SLX1P38324 304 aa3.59□□□□□ -1.84
PTM1YKL039W STP2P38704 541 aa3.59□□□□□ -1.84
PTM1YKL039W STN1P38960 494 aa3.59□□□□□ -1.84
PTM1YKL039W COX14P39103 70 aa3.59□□□□□ -1.84
PTM1YKL039W MMF1P40185 145 aaKnown RBP3.59□□□□□ -1.84
PTM1YKL039W UTP18P40362 594 aaPredicted RBP3.59□□□□□ -1.84
PTM1YKL039W LSB1P53281 241 aa3.59□□□□□ -1.84
PTM1YKL039W RRB1Q04225 511 aaKnown RBP3.59□□□□□ -1.84
PTM1YKL039W MDM36Q06820 579 aa3.59□□□□□ -1.84
PTM1YKL039W CUE5Q08412 411 aaKnown RBP3.59□□□□□ -1.84
PTM1YKL039W PLP2Q12017 286 aa3.59□□□□□ -1.84
PTM1YKL039W RUP1Q12242 671 aa3.59□□□□□ -1.84
PTM1YKL039W EXG1P23776 448 aaKnown RBP3.58□□□□□ -1.84
PTM1YKL039W NUP2P32499 720 aa3.58□□□□□ -1.84
PTM1YKL039W CYS4P32582 507 aaKnown RBP3.58□□□□□ -1.84
PTM1YKL039W RFT1P38206 574 aaPredicted RBP3.58□□□□□ -1.84
PTM1YKL039W HMF1P40037 129 aaKnown RBP3.58□□□□□ -1.84
PTM1YKL039W MRM2P53123 320 aa3.58□□□□□ -1.84
PTM1YKL039W ALF1P53904 254 aa3.58□□□□□ -1.84
PTM1YKL039W GYL1Q04322 720 aa3.58□□□□□ -1.84
PTM1YKL039W YLR456WQ06199 204 aa3.58□□□□□ -1.84
PTM1YKL039W UAF30Q08747 228 aa3.58□□□□□ -1.84
PTM1YKL039W AEP3Q12089 606 aa3.58□□□□□ -1.84
PTM1YKL039W RPL22AP05749 121 aaKnown RBP3.57□□□□□ -1.84
PTM1YKL039W CAP2P13517 287 aa3.57□□□□□ -1.84
PTM1YKL039W COQ1P18900 473 aa3.57□□□□□ -1.84
PTM1YKL039W PCL1P24867 279 aa3.57□□□□□ -1.84
PTM1YKL039W MYO3P36006 1272 aa3.57□□□□□ -1.84
PTM1YKL039W ATP3P38077 311 aaKnown RBP3.57□□□□□ -1.84
PTM1YKL039W FAD1P38913 306 aa3.57□□□□□ -1.84
PTM1YKL039W CTK3P46963 296 aaPredicted RBP3.57□□□□□ -1.84
PTM1YKL039W YGR111WP53265 400 aa3.57□□□□□ -1.84
PTM1YKL039W COS1P53822 381 aa3.57□□□□□ -1.84
PTM1YKL039W NDE2Q07500 545 aa3.57□□□□□ -1.84
PTM1YKL039W NCA2Q12374 616 aa3.57□□□□□ -1.84
PTM1YKL039W SMC6Q12749 1114 aa3.57□□□□□ -1.84
PTM1YKL039W RAD3P06839 778 aa3.56□□□□□ -1.84
PTM1YKL039W MSI1P13712 422 aa3.56□□□□□ -1.84
PTM1YKL039W OPI1P21957 404 aa3.56□□□□□ -1.84
PTM1YKL039W DPH5P32469 300 aaPredicted RBP3.56□□□□□ -1.84
PTM1YKL039W PCH2P38126 564 aa3.56□□□□□ -1.84
PTM1YKL039W MOB1P40484 314 aa3.56□□□□□ -1.84
PTM1YKL039W TOS3P43637 560 aa3.56□□□□□ -1.84
PTM1YKL039W FYV8P46949 817 aaKnown RBP3.56□□□□□ -1.84
PTM1YKL039W HAL1Q01766 294 aa3.56□□□□□ -1.84
PTM1YKL039W RIF2Q06208 395 aa3.56□□□□□ -1.84
PTM1YKL039W YPL225WQ08971 146 aaKnown RBP3.56□□□□□ -1.84
PTM1YKL039W SMF3Q12078 473 aaPredicted RBP3.56□□□□□ -1.84
PTM1YKL039W JIP3O13555 125 aa3.55□□□□□ -1.84
PTM1YKL039W DST1P07273 309 aa3.55□□□□□ -1.84
PTM1YKL039W MATALPHA2P0CY08 210 aa3.55□□□□□ -1.84
PTM1YKL039W HMLALPHA2P0CY09 210 aa3.55□□□□□ -1.84
PTM1YKL039W NAT1P12945 854 aaKnown RBP3.55□□□□□ -1.84
PTM1YKL039W UTH1P36135 365 aa3.55□□□□□ -1.84
PTM1YKL039W TVP38P36164 337 aa3.55□□□□□ -1.84
PTM1YKL039W MIG3P39943 394 aa3.55□□□□□ -1.84
PTM1YKL039W YDR341CQ05506 607 aaKnown RBP3.55□□□□□ -1.84
PTM1YKL039W STE23Q06010 1027 aa3.55□□□□□ -1.84
PTM1YKL039W YGK3Q12222 375 aaPredicted RBP3.55□□□□□ -1.84
PTM1YKL039W JID1Q12350 301 aa3.55□□□□□ -1.84
PTM1YKL039W PHO13P19881 312 aa3.55□□□□□ -1.84
PTM1YKL039W SRB4P32569 687 aa3.55□□□□□ -1.84
PTM1YKL039W INM1P38710 295 aa3.55□□□□□ -1.84
PTM1YKL039W GPI16P38875 610 aa3.55□□□□□ -1.84
PTM1YKL039W YER079WP40052 210 aaKnown RBP3.55□□□□□ -1.84
PTM1YKL039W ILM1P47155 203 aa3.55□□□□□ -1.84
PTM1YKL039W VAC14Q06708 880 aa3.55□□□□□ -1.84
PTM1YKL039W CEX1Q12453 761 aa3.55□□□□□ -1.84
PTM1YKL039W IRA2P19158 3079 aa3.54□□□□□ -1.84
PTM1YKL039W YLR422WQ06409 1932 aa3.54□□□□□ -1.84
PTM1YKL039W CDC8P00572 216 aa3.54□□□□□ -1.84
PTM1YKL039W CDC21P06785 304 aa3.54□□□□□ -1.84
PTM1YKL039W MRPS28P21771 286 aa3.54□□□□□ -1.84
PTM1YKL039W SEC14P24280 304 aaKnown RBP3.54□□□□□ -1.84
PTM1YKL039W RIM1P32445 135 aaKnown RBP3.54□□□□□ -1.84
PTM1YKL039W ANP1P32629 500 aa3.54□□□□□ -1.84
PTM1YKL039W DRE2P36152 348 aa3.54□□□□□ -1.84
PTM1YKL039W SRP72P38688 640 aaKnown RBP3.54□□□□□ -1.84
PTM1YKL039W LCB3P47013 409 aa3.54□□□□□ -1.84
PTM1YKL039W ADA2Q02336 434 aa3.54□□□□□ -1.84
PTM1YKL039W RTN1Q04947 295 aaKnown RBP3.54□□□□□ -1.84
PTM1YKL039W SUE1Q06524 206 aa3.54□□□□□ -1.84
PTM1YKL039W RAD1P06777 1100 aa3.53□□□□□ -1.84
PTM1YKL039W HSP26P15992 214 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
PTM1YKL039W RPB5P20434 215 aa3.53□□□□□ -1.84
PTM1YKL039W RAD5P32849 1169 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms