RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C RPS28BP0C0X0 67 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C YEL076C-AP0CX16 216 aa3.42□□□□□ -1.86
PDX1YGR193C YLR464WP0CX17 216 aa3.42□□□□□ -1.86
PDX1YGR193C PET54P10834 293 aa3.42□□□□□ -1.86
PDX1YGR193C DPM1P14020 267 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C PET9P18239 318 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C CDC43P18898 376 aa3.42□□□□□ -1.86
PDX1YGR193C RPO26P20435 155 aa3.42□□□□□ -1.86
PDX1YGR193C IDP1P21954 428 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C SLY1P22213 666 aa3.42□□□□□ -1.86
PDX1YGR193C RFA1P22336 621 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C UBC8P28263 218 aa3.42□□□□□ -1.86
PDX1YGR193C TRR1P29509 319 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C ARP2P32381 391 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C MDH3P32419 343 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
PDX1YGR193C HXT3P32466 567 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C RML2P32611 393 aa3.42□□□□□ -1.86
PDX1YGR193C REC104P33323 182 aa3.42□□□□□ -1.86
PDX1YGR193C SKT5P34226 696 aa3.42□□□□□ -1.86
PDX1YGR193C PRX1P34227 261 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C CSG2P35206 410 aa3.42□□□□□ -1.86
PDX1YGR193C SPC34P36131 295 aa3.42□□□□□ -1.86
PDX1YGR193C PRS4P38063 326 aaPredicted RBP3.42□□□□□ -1.86
PDX1YGR193C SHG1P38337 142 aa3.42□□□□□ -1.86
PDX1YGR193C ERG7P38604 731 aa3.42□□□□□ -1.86
PDX1YGR193C YHR078WP38799 552 aa3.42□□□□□ -1.86
PDX1YGR193C ALP1P38971 573 aa3.42□□□□□ -1.86
PDX1YGR193C YEL076CP39971 216 aa3.42□□□□□ -1.86
PDX1YGR193C COX15P40086 486 aa3.42□□□□□ -1.86
PDX1YGR193C DOT5P40553 215 aa3.42□□□□□ -1.86
PDX1YGR193C OPT1P40897 799 aa3.42□□□□□ -1.86
PDX1YGR193C SCD6P45978 349 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
PDX1YGR193C GUF1P46943 645 aa3.42□□□□□ -1.86
PDX1YGR193C FMP33P46998 180 aa3.42□□□□□ -1.86
PDX1YGR193C SFH5P47008 294 aa3.42□□□□□ -1.86
PDX1YGR193C DPB11P47027 764 aaPredicted RBP3.42□□□□□ -1.86
PDX1YGR193C IRC8P47046 822 aa3.42□□□□□ -1.86
PDX1YGR193C RPC17P47076 161 aa3.42□□□□□ -1.86
PDX1YGR193C JHD2P47156 728 aaPredicted RBP3.42□□□□□ -1.86
PDX1YGR193C AZR1P50080 613 aa3.42□□□□□ -1.86
PDX1YGR193C PHB2P50085 310 aa3.42□□□□□ -1.86
PDX1YGR193C CWC23P52868 283 aaPredicted RBP3.42□□□□□ -1.86
PDX1YGR193C UFD1P53044 361 aa3.42□□□□□ -1.86
PDX1YGR193C YGL235WP53071 178 aa3.42□□□□□ -1.86
PDX1YGR193C MTQ1P53944 314 aa3.42□□□□□ -1.86
PDX1YGR193C OCA2P53949 197 aa3.42□□□□□ -1.86
PDX1YGR193C YLR460CP54007 376 aa3.42□□□□□ -1.86
PDX1YGR193C RHO3Q00245 231 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C RPS15Q01855 142 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C CSN9Q03981 162 aa3.42□□□□□ -1.86
PDX1YGR193C PLM2Q04383 521 aa3.42□□□□□ -1.86
PDX1YGR193C PEX10Q05568 337 aa3.42□□□□□ -1.86
PDX1YGR193C RRP45Q05636 305 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C CRR1Q05790 422 aa3.42□□□□□ -1.86
PDX1YGR193C YLR036CQ07986 203 aa3.42□□□□□ -1.86
PDX1YGR193C YNG1Q08465 219 aa3.42□□□□□ -1.86
PDX1YGR193C SLF1Q12034 447 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C FCY22Q12119 530 aa3.42□□□□□ -1.86
PDX1YGR193C RKM5Q12367 367 aa3.42□□□□□ -1.86
PDX1YGR193C EFG1Q3E705 233 aaKnown RBP3.42□□□□□ -1.86
PDX1YGR193C YKL183C-AQ3E765 70 aa3.42□□□□□ -1.86
PDX1YGR193C RPS28AQ3E7X9 67 aaPredicted RBP3.42□□□□□ -1.86
PDX1YGR193C YPT6Q99260 215 aa3.42□□□□□ -1.86
PDX1YGR193C CHO2P05374 869 aaKnown RBP3.41□□□□□ -1.86
PDX1YGR193C PUT1P09368 476 aa3.41□□□□□ -1.86
PDX1YGR193C GPA2P10823 449 aa3.41□□□□□ -1.86
PDX1YGR193C MRP13P12686 339 aa3.41□□□□□ -1.86
PDX1YGR193C SPO7P18410 259 aa3.41□□□□□ -1.86
PDX1YGR193C SCL1P21243 252 aaKnown RBP3.41□□□□□ -1.86
PDX1YGR193C DAL82P21705 255 aa3.41□□□□□ -1.86
PDX1YGR193C PRE7P23724 241 aaKnown RBP3.41□□□□□ -1.86
PDX1YGR193C MGR1P25573 417 aa3.41□□□□□ -1.86
PDX1YGR193C ERG9P29704 444 aa3.41□□□□□ -1.86
PDX1YGR193C RAD23P32628 398 aaKnown RBP3.41□□□□□ -1.86
PDX1YGR193C SOF1P33750 489 aaKnown RBP3.41□□□□□ -1.86
PDX1YGR193C PAD1P33751 242 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
PDX1YGR193C TAF14P35189 244 aa3.41□□□□□ -1.86
PDX1YGR193C AUR1P36107 401 aaPredicted RBP3.41□□□□□ -1.86
PDX1YGR193C DRE2P36152 348 aa3.41□□□□□ -1.86
PDX1YGR193C TVP38P36164 337 aa3.41□□□□□ -1.86
PDX1YGR193C ECM13P38195 257 aa3.41□□□□□ -1.86
PDX1YGR193C ZTA1P38230 334 aaKnown RBP3.41□□□□□ -1.86
PDX1YGR193C POP4P38336 279 aa3.41□□□□□ -1.86
PDX1YGR193C BIG1P38813 335 aa3.41□□□□□ -1.86
PDX1YGR193C YHR210CP38893 341 aa3.41□□□□□ -1.86
PDX1YGR193C LCP5P40079 357 aaPredicted RBP3.41□□□□□ -1.86
PDX1YGR193C GPI14P47088 403 aaKnown RBP3.41□□□□□ -1.86
PDX1YGR193C HOC1P47124 396 aa3.41□□□□□ -1.86
PDX1YGR193C YGR149WP48236 432 aa3.41□□□□□ -1.86
PDX1YGR193C NAS6P50086 228 aa3.41□□□□□ -1.86
PDX1YGR193C UBC9P50623 157 aaPredicted RBP3.41□□□□□ -1.86
PDX1YGR193C COG1P53079 417 aa3.41□□□□□ -1.86
PDX1YGR193C YNR066CP53752 436 aa3.41□□□□□ -1.86
PDX1YGR193C ASI2P53895 289 aa3.41□□□□□ -1.86
PDX1YGR193C NUP49Q02199 472 aa3.41□□□□□ -1.86
PDX1YGR193C SPP2Q02521 185 aa3.41□□□□□ -1.86
PDX1YGR193C SNO1Q03144 224 aa3.41□□□□□ -1.86
PDX1YGR193C MTG1Q03151 367 aaPredicted RBP3.41□□□□□ -1.86
PDX1YGR193C YDR476CQ03362 224 aa3.41□□□□□ -1.86
PDX1YGR193C IZH1Q03419 316 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms