RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeastyeast

Gene SLX9, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX9YGR081C GIT1P25346 518 aa2.29□□□□□ -2.04
SLX9YGR081C ZUO1P32527 433 aaKnown RBP2.29□□□□□ -2.04
SLX9YGR081C DOA1P36037 715 aa2.29□□□□□ -2.04
SLX9YGR081C DTR1P38125 572 aa2.29□□□□□ -2.04
SLX9YGR081C GEP4P38812 185 aa2.29□□□□□ -2.04
SLX9YGR081C LSM12P38828 187 aaKnown RBP2.29□□□□□ -2.04
SLX9YGR081C TRF5P48561 642 aaKnown RBP2.29□□□□□ -2.04
SLX9YGR081C ATP22P50273 684 aaPredicted RBP2.29□□□□□ -2.04
SLX9YGR081C VAC7P53950 1165 aa2.29□□□□□ -2.04
SLX9YGR081C REX2P54964 269 aaKnown RBP2.29□□□□□ -2.04
SLX9YGR081C MEH1Q02205 184 aa2.29□□□□□ -2.04
SLX9YGR081C YDR541CQ03049 344 aa2.29□□□□□ -2.04
SLX9YGR081C MCH1Q07376 486 aa2.29□□□□□ -2.04
SLX9YGR081C PDE2P06776 526 aa2.28□□□□□ -2.04
SLX9YGR081C STE7P06784 515 aa2.28□□□□□ -2.04
SLX9YGR081C PFF1P38244 976 aa2.28□□□□□ -2.04
SLX9YGR081C BMT2P38278 337 aa2.28□□□□□ -2.04
SLX9YGR081C SEH1P53011 349 aaKnown RBP2.28□□□□□ -2.04
SLX9YGR081C HST1P53685 503 aa2.28□□□□□ -2.04
SLX9YGR081C PRP38Q00723 242 aaPredicted RBP2.28□□□□□ -2.04
SLX9YGR081C MEX67Q99257 599 aaKnown RBP2.28□□□□□ -2.04
SLX9YGR081C VMR1P38735 1592 aa2.27□□□□□ -2.05
SLX9YGR081C RNA1P11745 407 aaKnown RBP2.27□□□□□ -2.05
SLX9YGR081C YFL012WP43580 148 aa2.27□□□□□ -2.05
SLX9YGR081C RTT102P53330 157 aa2.27□□□□□ -2.05
SLX9YGR081C MSC3Q05812 728 aa2.27□□□□□ -2.05
SLX9YGR081C YOR376WQ08900 122 aa2.27□□□□□ -2.05
SLX9YGR081C SFM1Q12314 213 aa2.27□□□□□ -2.05
SLX9YGR081C RPO21P04050 1733 aaKnown RBP2.27□□□□□ -2.05
SLX9YGR081C YBT1P32386 1661 aa2.27□□□□□ -2.05
SLX9YGR081C TPI1P00942 248 aaKnown RBP2.26□□□□□ -2.05
SLX9YGR081C RPS18AP0CX55 146 aaKnown RBP2.26□□□□□ -2.05
SLX9YGR081C RPS18BP0CX56 146 aaPredicted RBP2.26□□□□□ -2.05
SLX9YGR081C MAS2P11914 482 aa2.26□□□□□ -2.05
SLX9YGR081C PUT4P15380 627 aa2.26□□□□□ -2.05
SLX9YGR081C ANP1P32629 500 aa2.26□□□□□ -2.05
SLX9YGR081C TOA1P32773 286 aa2.26□□□□□ -2.05
SLX9YGR081C SOL2P37262 315 aa2.26□□□□□ -2.05
SLX9YGR081C SRP72P38688 640 aaKnown RBP2.26□□□□□ -2.05
SLX9YGR081C SEC9P40357 651 aa2.26□□□□□ -2.05
SLX9YGR081C BUD27P43573 796 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
SLX9YGR081C CIN2P46670 268 aa2.26□□□□□ -2.05
SLX9YGR081C RPL21AQ02753 160 aaKnown RBP2.26□□□□□ -2.05
SLX9YGR081C LDS2Q08218 356 aa2.26□□□□□ -2.05
SLX9YGR081C AAD15Q08361 143 aa2.26□□□□□ -2.05
SLX9YGR081C PRM7Q12459 698 aa2.26□□□□□ -2.05
SLX9YGR081C RPL21BQ12672 160 aaKnown RBP2.26□□□□□ -2.05
SLX9YGR081C BI3Q9ZZW7 517 aa2.26□□□□□ -2.05
SLX9YGR081C TAO3P40468 2376 aa2.25□□□□□ -2.05
SLX9YGR081C MSP1P28737 362 aa2.25□□□□□ -2.05
SLX9YGR081C YER184CP39961 794 aa2.25□□□□□ -2.05
SLX9YGR081C SEC27P41811 889 aaKnown RBP2.25□□□□□ -2.05
SLX9YGR081C CTK3P46963 296 aaPredicted RBP2.25□□□□□ -2.05
SLX9YGR081C CIK1Q01649 594 aa2.25□□□□□ -2.05
SLX9YGR081C YPL107WQ02873 248 aa2.25□□□□□ -2.05
SLX9YGR081C YLR177WQ06251 628 aa2.25□□□□□ -2.05
SLX9YGR081C SPE3Q12074 293 aaKnown RBP2.25□□□□□ -2.05
SLX9YGR081C TIR4Q12218 487 aaPredicted RBP2.25□□□□□ -2.05
SLX9YGR081C SNQ2P32568 1501 aaKnown RBP2.24□□□□□ -2.05
SLX9YGR081C VTH1P40438 1549 aa2.24□□□□□ -2.05
SLX9YGR081C VTH2P40890 1549 aa2.24□□□□□ -2.05
SLX9YGR081C PDC2P32896 925 aa2.24□□□□□ -2.05
SLX9YGR081C WSC4P38739 605 aa2.24□□□□□ -2.05
SLX9YGR081C YHR177WP38867 453 aa2.24□□□□□ -2.05
SLX9YGR081C MNL1P38888 796 aa2.24□□□□□ -2.05
SLX9YGR081C MLH1P38920 769 aa2.24□□□□□ -2.05
SLX9YGR081C ASN2P49090 572 aaKnown RBP2.24□□□□□ -2.05
SLX9YGR081C ERO1Q03103 563 aa2.24□□□□□ -2.05
SLX9YGR081C GAT3Q07928 141 aa2.24□□□□□ -2.05
SLX9YGR081C RPN5Q12250 445 aaKnown RBP2.24□□□□□ -2.05
SLX9YGR081C HIF1Q12373 385 aa2.24□□□□□ -2.05
SLX9YGR081C HMS1Q12398 434 aa2.24□□□□□ -2.05
SLX9YGR081C SMC6Q12749 1114 aa2.24□□□□□ -2.05
SLX9YGR081C TY2B-LR1P0C2J3 1770 aa2.23□□□□□ -2.05
SLX9YGR081C TY2B-FP0CX63 1770 aa2.23□□□□□ -2.05
SLX9YGR081C TY2B-GR2P0CX64 1770 aa2.23□□□□□ -2.05
SLX9YGR081C TY2B-CP25384 1770 aa2.23□□□□□ -2.05
SLX9YGR081C TY2B-DR2Q03494 1770 aa2.23□□□□□ -2.05
SLX9YGR081C TY1B-DR1Q03855 1755 aa2.23□□□□□ -2.05
SLX9YGR081C TY2B-DR3Q07791 1770 aaKnown RBP2.23□□□□□ -2.05
SLX9YGR081C TY2B-OR1Q12113 1770 aa2.23□□□□□ -2.05
SLX9YGR081C TY2B-DR1Q12472 1770 aa2.23□□□□□ -2.05
SLX9YGR081C TY2B-OR2Q12501 1770 aa2.23□□□□□ -2.05
SLX9YGR081C SPT7P35177 1332 aa2.23□□□□□ -2.05
SLX9YGR081C YRF1-2P40105 1681 aa2.23□□□□□ -2.05
SLX9YGR081C RPS19AP07280 144 aaKnown RBP2.23□□□□□ -2.05
SLX9YGR081C RPS19BP07281 144 aaPredicted RBP2.23□□□□□ -2.05
SLX9YGR081C RPL1AP0CX43 217 aaKnown RBP2.23□□□□□ -2.05
SLX9YGR081C RPL1BP0CX44 217 aaKnown RBP2.23□□□□□ -2.05
SLX9YGR081C RRP7P25368 297 aaPredicted RBP2.23□□□□□ -2.05
SLX9YGR081C VMA8P32610 256 aaKnown RBP2.23□□□□□ -2.05
SLX9YGR081C WSS1P38838 269 aa2.23□□□□□ -2.05
SLX9YGR081C FHL1P39521 936 aa2.23□□□□□ -2.05
SLX9YGR081C PEX22P39718 180 aa2.23□□□□□ -2.05
SLX9YGR081C PFS2P42841 465 aaKnown RBP2.23□□□□□ -2.05
SLX9YGR081C EAF6P47128 113 aa2.23□□□□□ -2.05
SLX9YGR081C YML6P51998 286 aa2.23□□□□□ -2.05
SLX9YGR081C GYL1Q04322 720 aa2.23□□□□□ -2.05
SLX9YGR081C YDR115WQ04598 105 aa2.23□□□□□ -2.05
SLX9YGR081C SLF1Q12034 447 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 90.3 ms