RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W REX4Q08237 289 aa5.06□□□□□ -1.6
CDC43YGL155W YDR061WQ12298 539 aa5.06□□□□□ -1.6
CDC43YGL155W SUL2Q12325 893 aa5.06□□□□□ -1.6
CDC43YGL155W PCL9Q12477 304 aa5.06□□□□□ -1.6
CDC43YGL155W YEL009C-AA0A023PZF2 135 aa5.05□□□□□ -1.6
CDC43YGL155W MET2P08465 486 aa5.05□□□□□ -1.6
CDC43YGL155W YOL163WP0CF20 169 aa5.05□□□□□ -1.6
CDC43YGL155W APN1P22936 367 aa5.05□□□□□ -1.6
CDC43YGL155W PRP28P23394 588 aa5.05□□□□□ -1.6
CDC43YGL155W AHC2P25649 128 aa5.05□□□□□ -1.6
CDC43YGL155W THI4P32318 326 aa5.05□□□□□ -1.6
CDC43YGL155W SSH4P32343 579 aa5.05□□□□□ -1.6
CDC43YGL155W HYM1P32464 399 aa5.05□□□□□ -1.6
CDC43YGL155W LYP1P32487 611 aa5.05□□□□□ -1.6
CDC43YGL155W PET112P33893 541 aa5.05□□□□□ -1.6
CDC43YGL155W TOD6P34219 525 aa5.05□□□□□ -1.6
CDC43YGL155W MTC2P34246 357 aa5.05□□□□□ -1.6
CDC43YGL155W APT2P36973 181 aa5.05□□□□□ -1.6
CDC43YGL155W MCM7P38132 845 aa5.05□□□□□ -1.6
CDC43YGL155W RPS20P38701 121 aaKnown RBP5.05□□□□□ -1.6
CDC43YGL155W TAT2P38967 592 aa5.05□□□□□ -1.6
CDC43YGL155W AIM2P39721 246 aa5.05□□□□□ -1.6
CDC43YGL155W MOB1P40484 314 aa5.05□□□□□ -1.6
CDC43YGL155W FMC1P40491 155 aa5.05□□□□□ -1.6
CDC43YGL155W AZF1P41696 914 aa5.05□□□□□ -1.6
CDC43YGL155W ATG18P43601 500 aa5.05□□□□□ -1.6
CDC43YGL155W HXT16P47185 567 aa5.05□□□□□ -1.6
CDC43YGL155W UBC9P50623 157 aaPredicted RBP5.05□□□□□ -1.6
CDC43YGL155W COS10P52924 374 aa5.05□□□□□ -1.6
CDC43YGL155W COS1P53822 381 aa5.05□□□□□ -1.6
CDC43YGL155W LSM7P53905 115 aaKnown RBP5.05□□□□□ -1.6
CDC43YGL155W CTK1Q03957 528 aaKnown RBP5.05□□□□□ -1.6
CDC43YGL155W PDR8Q06149 701 aa5.05□□□□□ -1.6
CDC43YGL155W VPS36Q06696 566 aa5.05□□□□□ -1.6
CDC43YGL155W ASR1Q06834 288 aa5.05□□□□□ -1.6
CDC43YGL155W XYL2Q07993 356 aa5.05□□□□□ -1.6
CDC43YGL155W DCI1Q08558 271 aa5.05□□□□□ -1.6
CDC43YGL155W RRG7Q08774 242 aaPredicted RBP5.05□□□□□ -1.6
CDC43YGL155W VPS68Q12016 184 aa5.05□□□□□ -1.6
CDC43YGL155W RRP12Q12754 1228 aaKnown RBP5.05□□□□□ -1.6
CDC43YGL155W SLH1P53327 1967 aaKnown RBP5.04□□□□□ -1.6
CDC43YGL155W INH1P01097 85 aa5.04□□□□□ -1.6
CDC43YGL155W SEC12P11655 471 aa5.04□□□□□ -1.6
CDC43YGL155W SEN2P16658 377 aa5.04□□□□□ -1.6
CDC43YGL155W HOP1P20050 605 aa5.04□□□□□ -1.6
CDC43YGL155W ADE1P27616 306 aa5.04□□□□□ -1.6
CDC43YGL155W HOM6P31116 359 aaKnown RBP5.04□□□□□ -1.6
CDC43YGL155W YKL151CP36059 337 aa5.04□□□□□ -1.6
CDC43YGL155W SHE2P36068 246 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
CDC43YGL155W TCD2P36101 447 aaKnown RBP5.04□□□□□ -1.6
CDC43YGL155W TRM7P38238 310 aaKnown RBP5.04□□□□□ -1.6
CDC43YGL155W YBR137WP38276 179 aa5.04□□□□□ -1.6
CDC43YGL155W VMA7P39111 118 aa5.04□□□□□ -1.6
CDC43YGL155W OSW5P40219 148 aa5.04□□□□□ -1.6
CDC43YGL155W PFS2P42841 465 aaKnown RBP5.04□□□□□ -1.6
CDC43YGL155W IDS2P46958 469 aa5.04□□□□□ -1.6
CDC43YGL155W YJL049WP47048 450 aa5.04□□□□□ -1.6
CDC43YGL155W BAT2P47176 376 aaKnown RBP5.04□□□□□ -1.6
CDC43YGL155W RAD17P48581 401 aa5.04□□□□□ -1.6
CDC43YGL155W SPT20P50875 604 aa5.04□□□□□ -1.6
CDC43YGL155W YGR067CP53243 804 aa5.04□□□□□ -1.6
CDC43YGL155W YGR250CP53316 781 aaKnown RBP5.04□□□□□ -1.6
CDC43YGL155W YNL034WP53963 612 aa5.04□□□□□ -1.6
CDC43YGL155W TIM11P81449 96 aaPredicted RBP5.04□□□□□ -1.6
CDC43YGL155W ROY1Q04847 553 aa5.04□□□□□ -1.6
CDC43YGL155W YMR310CQ04867 317 aaPredicted RBP5.04□□□□□ -1.6
CDC43YGL155W BUR2Q05949 395 aa5.04□□□□□ -1.6
CDC43YGL155W YLR173WQ06247 608 aa5.04□□□□□ -1.6
CDC43YGL155W PHO92Q06390 306 aa5.04□□□□□ -1.6
CDC43YGL155W RRP9Q06506 573 aaKnown RBP5.04□□□□□ -1.6
CDC43YGL155W MLC2Q06580 163 aa5.04□□□□□ -1.6
CDC43YGL155W IPK1Q06667 281 aa5.04□□□□□ -1.6
CDC43YGL155W ATG10Q07879 167 aa5.04□□□□□ -1.6
CDC43YGL155W PLB3Q08108 686 aa5.04□□□□□ -1.6
CDC43YGL155W YNG1Q08465 219 aa5.04□□□□□ -1.6
CDC43YGL155W PUS9Q12069 462 aa5.04□□□□□ -1.6
CDC43YGL155W MDM32Q12171 622 aa5.04□□□□□ -1.6
CDC43YGL155W GLO4Q12320 285 aa5.04□□□□□ -1.6
CDC43YGL155W HTZ1Q12692 134 aaKnown RBP5.04□□□□□ -1.6
CDC43YGL155W CYC1P00044 109 aaPredicted RBP5.03□□□□□ -1.6
CDC43YGL155W SIR2P06700 562 aa5.03□□□□□ -1.6
CDC43YGL155W PEP4P07267 405 aaKnown RBP5.03□□□□□ -1.6
CDC43YGL155W CAR2P07991 424 aaKnown RBP5.03□□□□□ -1.6
CDC43YGL155W PET54P10834 293 aa5.03□□□□□ -1.6
CDC43YGL155W GRX2P17695 143 aaKnown RBP5.03□□□□□ -1.6
CDC43YGL155W ERG9P29704 444 aa5.03□□□□□ -1.6
CDC43YGL155W NTH1P32356 751 aa5.03□□□□□ -1.6
CDC43YGL155W KRE6P32486 720 aa5.03□□□□□ -1.6
CDC43YGL155W NIC96P34077 839 aa5.03□□□□□ -1.6
CDC43YGL155W JEN1P36035 616 aa5.03□□□□□ -1.6
CDC43YGL155W YRO2P38079 344 aa5.03□□□□□ -1.6
CDC43YGL155W SHE1P38200 338 aa5.03□□□□□ -1.6
CDC43YGL155W CCZ1P38273 704 aa5.03□□□□□ -1.6
CDC43YGL155W NAB3P38996 802 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
CDC43YGL155W MET30P39014 640 aa5.03□□□□□ -1.6
CDC43YGL155W YFR020WP43600 232 aa5.03□□□□□ -1.6
CDC43YGL155W YGL101WP53144 215 aa5.03□□□□□ -1.6
CDC43YGL155W MTQ1P53944 314 aa5.03□□□□□ -1.6
CDC43YGL155W EAR1Q03212 550 aa5.03□□□□□ -1.6
CDC43YGL155W TMN2Q04562 672 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms