RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W SRN2Q99176 213 aa5.72□□□□□ -1.49
LCP5YER127W ARF1P11076 181 aaKnown RBP5.71□□□□□ -1.5
LCP5YER127W DAP2P18962 818 aa5.71□□□□□ -1.5
LCP5YER127W MAK31P23059 88 aa5.71□□□□□ -1.5
LCP5YER127W PRS1P32895 427 aaKnown RBP5.71□□□□□ -1.5
LCP5YER127W BUD2P33314 1104 aa5.71□□□□□ -1.5
LCP5YER127W COX14P39103 70 aa5.71□□□□□ -1.5
LCP5YER127W YIL029CP40538 142 aa5.71□□□□□ -1.5
LCP5YER127W YPI1P43587 155 aa5.71□□□□□ -1.5
LCP5YER127W SCW10Q04951 389 aa5.71□□□□□ -1.5
LCP5YER127W HRI1Q05905 244 aaKnown RBP5.71□□□□□ -1.5
LCP5YER127W ECM29P38737 1868 aa5.71□□□□□ -1.5
LCP5YER127W TPK3P05986 398 aa5.7□□□□□ -1.5
LCP5YER127W RPS8AP0CX39 200 aaKnown RBP5.7□□□□□ -1.5
LCP5YER127W RPS8BP0CX40 200 aaKnown RBP5.7□□□□□ -1.5
LCP5YER127W PHO84P25297 587 aaKnown RBP5.7□□□□□ -1.5
LCP5YER127W DAL2P25335 343 aa5.7□□□□□ -1.5
LCP5YER127W DBP7P36120 742 aaKnown RBP5.7□□□□□ -1.5
LCP5YER127W SBE22P38814 852 aa5.7□□□□□ -1.5
LCP5YER127W TLG2Q08144 397 aa5.7□□□□□ -1.5
LCP5YER127W POT1P27796 417 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
LCP5YER127W ARO2P28777 376 aaKnown RBP5.69□□□□□ -1.5
LCP5YER127W YGL039WP53183 348 aaKnown RBP5.69□□□□□ -1.5
LCP5YER127W PRP3Q03338 469 aaPredicted RBP5.69□□□□□ -1.5
LCP5YER127W MYO5Q04439 1219 aaKnown RBP5.69□□□□□ -1.5
LCP5YER127W NKP2Q06162 153 aa5.69□□□□□ -1.5
LCP5YER127W MRPL35Q06678 367 aa5.69□□□□□ -1.5
LCP5YER127W ASA1Q06822 443 aa5.69□□□□□ -1.5
LCP5YER127W TMS1Q12116 473 aa5.69□□□□□ -1.5
LCP5YER127W RAD50P12753 1312 aa5.69□□□□□ -1.5
LCP5YER127W NAM2P11325 894 aa5.68□□□□□ -1.5
LCP5YER127W MAS2P11914 482 aa5.68□□□□□ -1.5
LCP5YER127W PET123P17558 318 aa5.68□□□□□ -1.5
LCP5YER127W POP5P28005 173 aa5.68□□□□□ -1.5
LCP5YER127W RME1P32338 300 aaKnown RBP5.68□□□□□ -1.5
LCP5YER127W PHA2P32452 334 aa5.68□□□□□ -1.5
LCP5YER127W SKT5P34226 696 aa5.68□□□□□ -1.5
LCP5YER127W TVP38P36164 337 aa5.68□□□□□ -1.5
LCP5YER127W PAN6P40459 309 aa5.68□□□□□ -1.5
LCP5YER127W MRM2P53123 320 aa5.68□□□□□ -1.5
LCP5YER127W MTQ1P53944 314 aa5.68□□□□□ -1.5
LCP5YER127W YMR321CQ04898 105 aa5.68□□□□□ -1.5
LCP5YER127W AAD15Q08361 143 aa5.68□□□□□ -1.5
LCP5YER127W CUE5Q08412 411 aaKnown RBP5.68□□□□□ -1.5
LCP5YER127W YOP1Q12402 180 aa5.68□□□□□ -1.5
LCP5YER127W YEF1P32622 495 aa5.67□□□□□ -1.5
LCP5YER127W ADH5P38113 351 aaKnown RBP5.67□□□□□ -1.5
LCP5YER127W MSG5P38590 489 aa5.67□□□□□ -1.5
LCP5YER127W YHR177WP38867 453 aa5.67□□□□□ -1.5
LCP5YER127W CAJ1P39101 391 aa5.67□□□□□ -1.5
LCP5YER127W REE1P40893 198 aa5.67□□□□□ -1.5
LCP5YER127W MDE1P47095 244 aa5.67□□□□□ -1.5
LCP5YER127W TOS2P50078 622 aa5.67□□□□□ -1.5
LCP5YER127W YGR016WP53209 190 aa5.67□□□□□ -1.5
LCP5YER127W LDS2Q08218 356 aa5.67□□□□□ -1.5
LCP5YER127W SSC1P0CS90 654 aaKnown RBP5.66□□□□□ -1.5
LCP5YER127W SCH9P11792 824 aaKnown RBP5.66□□□□□ -1.5
LCP5YER127W FAA1P30624 700 aaKnown RBP5.66□□□□□ -1.5
LCP5YER127W KAR9P32526 644 aa5.66□□□□□ -1.5
LCP5YER127W YHR131CP38835 850 aa5.66□□□□□ -1.5
LCP5YER127W SPG5P42933 373 aa5.66□□□□□ -1.5
LCP5YER127W YGR210CP42942 411 aa5.66□□□□□ -1.5
LCP5YER127W ATP22P50273 684 aaPredicted RBP5.66□□□□□ -1.5
LCP5YER127W UBA1P22515 1024 aaKnown RBP5.65□□□□□ -1.5
LCP5YER127W ALF1P53904 254 aa5.65□□□□□ -1.5
LCP5YER127W YDR286CQ05530 114 aa5.65□□□□□ -1.5
LCP5YER127W MDM36Q06820 579 aa5.65□□□□□ -1.5
LCP5YER127W RSA1Q08932 381 aa5.65□□□□□ -1.5
LCP5YER127W OPY1P38271 328 aa5.64□□□□□ -1.51
LCP5YER127W CSM3Q04659 317 aa5.64□□□□□ -1.51
LCP5YER127W SUE1Q06524 206 aa5.64□□□□□ -1.51
LCP5YER127W DPH5P32469 300 aaPredicted RBP5.63□□□□□ -1.51
LCP5YER127W SIF2P38262 535 aa5.63□□□□□ -1.51
LCP5YER127W GEP4P38812 185 aa5.63□□□□□ -1.51
LCP5YER127W LCB3P47013 409 aa5.63□□□□□ -1.51
LCP5YER127W AIM24P47127 394 aa5.63□□□□□ -1.51
LCP5YER127W BTN2P53286 410 aa5.63□□□□□ -1.51
LCP5YER127W TRM112P53738 135 aaPredicted RBP5.63□□□□□ -1.51
LCP5YER127W ADA2Q02336 434 aa5.63□□□□□ -1.51
LCP5YER127W PEX27Q08580 376 aa5.63□□□□□ -1.51
LCP5YER127W EAF3Q12432 401 aa5.63□□□□□ -1.51
LCP5YER127W PAB1P04147 577 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
LCP5YER127W PIS1P06197 220 aaKnown RBP5.62□□□□□ -1.51
LCP5YER127W CLN3P13365 580 aa5.62□□□□□ -1.51
LCP5YER127W SMI1P32566 505 aa5.62□□□□□ -1.51
LCP5YER127W CSE2P33308 149 aa5.62□□□□□ -1.51
LCP5YER127W MAM33P40513 266 aa5.62□□□□□ -1.51
LCP5YER127W YJR085CP47131 105 aaKnown RBP5.62□□□□□ -1.51
LCP5YER127W YNR068CP53754 272 aa5.62□□□□□ -1.51
LCP5YER127W COS1P53822 381 aa5.62□□□□□ -1.51
LCP5YER127W YMR102CQ03177 834 aa5.62□□□□□ -1.51
LCP5YER127W DBP9Q06218 594 aaKnown RBP5.62□□□□□ -1.51
LCP5YER127W SMC5Q08204 1093 aa5.62□□□□□ -1.51
LCP5YER127W HIF1Q12373 385 aa5.62□□□□□ -1.51
LCP5YER127W MYO1P08964 1928 aa5.62□□□□□ -1.51
LCP5YER127W RNA1P11745 407 aaKnown RBP5.61□□□□□ -1.51
LCP5YER127W GPX2P38143 162 aa5.61□□□□□ -1.51
LCP5YER127W HAC1P41546 238 aa5.61□□□□□ -1.51
LCP5YER127W RRN9P53437 365 aa5.61□□□□□ -1.51
LCP5YER127W LOT6Q07923 191 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 83.8 ms