RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C IRA2P19158 3079 aa5.32□□□□□ -1.56
SEC20YDR498C NFT1P0CE68 1218 aa5.31□□□□□ -1.56
SEC20YDR498C ERD1P16151 362 aa5.31□□□□□ -1.56
SEC20YDR498C MDH1P17505 334 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
SEC20YDR498C MRPL33P20084 86 aa5.31□□□□□ -1.56
SEC20YDR498C HCM1P25364 564 aa5.31□□□□□ -1.56
SEC20YDR498C RIB7P33312 244 aa5.31□□□□□ -1.56
SEC20YDR498C DHR2P36009 735 aaPredicted RBP5.31□□□□□ -1.56
SEC20YDR498C YKL077WP36081 392 aa5.31□□□□□ -1.56
SEC20YDR498C UTH1P36135 365 aa5.31□□□□□ -1.56
SEC20YDR498C GPX2P38143 162 aa5.31□□□□□ -1.56
SEC20YDR498C EHT1P38295 451 aa5.31□□□□□ -1.56
SEC20YDR498C ECM34P38728 170 aa5.31□□□□□ -1.56
SEC20YDR498C YHR097CP38809 366 aaKnown RBP5.31□□□□□ -1.56
SEC20YDR498C GDI1P39958 451 aaKnown RBP5.31□□□□□ -1.56
SEC20YDR498C AIM10P39965 576 aaKnown RBP5.31□□□□□ -1.56
SEC20YDR498C YJL218WP40892 196 aaKnown RBP5.31□□□□□ -1.56
SEC20YDR498C RET2P43621 546 aa5.31□□□□□ -1.56
SEC20YDR498C IRC7P43623 340 aa5.31□□□□□ -1.56
SEC20YDR498C NUP57P48837 541 aa5.31□□□□□ -1.56
SEC20YDR498C SHE4P51534 789 aa5.31□□□□□ -1.56
SEC20YDR498C EXG2P52911 562 aa5.31□□□□□ -1.56
SEC20YDR498C RAI1P53063 387 aaKnown RBP5.31□□□□□ -1.56
SEC20YDR498C ASI1P54074 624 aa5.31□□□□□ -1.56
SEC20YDR498C YKR005CQ02203 525 aa5.31□□□□□ -1.56
SEC20YDR498C ABZ2Q03266 374 aa5.31□□□□□ -1.56
SEC20YDR498C INP1Q03694 420 aa5.31□□□□□ -1.56
SEC20YDR498C KRE28Q04431 385 aa5.31□□□□□ -1.56
SEC20YDR498C NAT4Q04751 285 aa5.31□□□□□ -1.56
SEC20YDR498C THI73Q07904 523 aa5.31□□□□□ -1.56
SEC20YDR498C FRE5Q08908 694 aa5.31□□□□□ -1.56
SEC20YDR498C YPL191CQ08930 360 aa5.31□□□□□ -1.56
SEC20YDR498C ACF2Q12168 779 aa5.31□□□□□ -1.56
SEC20YDR498C RKM5Q12367 367 aa5.31□□□□□ -1.56
SEC20YDR498C BLM10P43583 2143 aa5.3□□□□□ -1.56
SEC20YDR498C RPN13O13563 156 aa5.3□□□□□ -1.56
SEC20YDR498C GAL4P04386 881 aa5.3□□□□□ -1.56
SEC20YDR498C YOL163WP0CF20 169 aa5.3□□□□□ -1.56
SEC20YDR498C BAR1P12630 587 aa5.3□□□□□ -1.56
SEC20YDR498C SAC7P17121 654 aa5.3□□□□□ -1.56
SEC20YDR498C RPL24BP24000 155 aaKnown RBP5.3□□□□□ -1.56
SEC20YDR498C YCR006CP25350 157 aa5.3□□□□□ -1.56
SEC20YDR498C RAD51P25454 400 aa5.3□□□□□ -1.56
SEC20YDR498C VMA3P25515 160 aa5.3□□□□□ -1.56
SEC20YDR498C SSH4P32343 579 aa5.3□□□□□ -1.56
SEC20YDR498C ARC19P33204 171 aaKnown RBP5.3□□□□□ -1.56
SEC20YDR498C MSN2P33748 704 aa5.3□□□□□ -1.56
SEC20YDR498C NUF2P33895 451 aa5.3□□□□□ -1.56
SEC20YDR498C ZRT3P34240 503 aa5.3□□□□□ -1.56
SEC20YDR498C YHK8P38776 514 aa5.3□□□□□ -1.56
SEC20YDR498C FMP52P40008 231 aa5.3□□□□□ -1.56
SEC20YDR498C JLP2P40206 208 aa5.3□□□□□ -1.56
SEC20YDR498C AIM20P40451 204 aa5.3□□□□□ -1.56
SEC20YDR498C MET28P40573 187 aa5.3□□□□□ -1.56
SEC20YDR498C STB1P42845 420 aa5.3□□□□□ -1.56
SEC20YDR498C MRPS18P42847 217 aa5.3□□□□□ -1.56
SEC20YDR498C MRH4P53166 561 aa5.3□□□□□ -1.56
SEC20YDR498C EGD1Q02642 157 aaKnown RBP5.3□□□□□ -1.56
SEC20YDR498C YPL068CQ02749 293 aa5.3□□□□□ -1.56
SEC20YDR498C OST6Q03723 332 aa5.3□□□□□ -1.56
SEC20YDR498C YPS7Q06325 596 aa5.3□□□□□ -1.56
SEC20YDR498C MDM36Q06820 579 aa5.3□□□□□ -1.56
SEC20YDR498C BRE4Q07660 1125 aa5.3□□□□□ -1.56
SEC20YDR498C IRC13Q08630 104 aa5.3□□□□□ -1.56
SEC20YDR498C YDR262WQ12331 272 aa5.3□□□□□ -1.56
SEC20YDR498C YKL033W-AQ86ZR7 236 aa5.3□□□□□ -1.56
SEC20YDR498C CDC39P25655 2108 aaKnown RBP5.3□□□□□ -1.56
SEC20YDR498C RPP1AP05318 106 aaPredicted RBP5.29□□□□□ -1.56
SEC20YDR498C YOL162WP0CF19 215 aa5.29□□□□□ -1.56
SEC20YDR498C DBP3P20447 523 aaKnown RBP5.29□□□□□ -1.56
SEC20YDR498C IDP1P21954 428 aaKnown RBP5.29□□□□□ -1.56
SEC20YDR498C PTP1P25044 335 aa5.29□□□□□ -1.56
SEC20YDR498C BUD5P25300 642 aaPredicted RBP5.29□□□□□ -1.56
SEC20YDR498C GIT1P25346 518 aa5.29□□□□□ -1.56
SEC20YDR498C ACH1P32316 526 aa5.29□□□□□ -1.56
SEC20YDR498C RPS27AP35997 82 aaKnown RBP5.29□□□□□ -1.56
SEC20YDR498C SNU114P36048 1008 aaKnown RBP5.29□□□□□ -1.56
SEC20YDR498C RPS27BP38711 82 aa5.29□□□□□ -1.56
SEC20YDR498C FMO1P38866 432 aa5.29□□□□□ -1.56
SEC20YDR498C ZRG8P40021 1076 aa5.29□□□□□ -1.56
SEC20YDR498C YNL208WP40159 199 aaKnown RBP5.29□□□□□ -1.56
SEC20YDR498C LTP1P40347 161 aa5.29□□□□□ -1.56
SEC20YDR498C UTP25P40498 721 aaKnown RBP5.29□□□□□ -1.56
SEC20YDR498C PAM16P42949 149 aa5.29□□□□□ -1.56
SEC20YDR498C PXR1P53335 271 aaPredicted RBP5.29□□□□□ -1.56
SEC20YDR498C MKC7P53379 596 aa5.29□□□□□ -1.56
SEC20YDR498C DBP6P53734 629 aaKnown RBP5.29□□□□□ -1.56
SEC20YDR498C YSA1Q01976 231 aa5.29□□□□□ -1.56
SEC20YDR498C YMR087WQ04299 284 aa5.29□□□□□ -1.56
SEC20YDR498C PLM2Q04383 521 aa5.29□□□□□ -1.56
SEC20YDR498C MGR3Q04472 501 aa5.29□□□□□ -1.56
SEC20YDR498C ATG38Q05789 226 aaKnown RBP5.29□□□□□ -1.56
SEC20YDR498C NEJ1Q06148 342 aa5.29□□□□□ -1.56
SEC20YDR498C ARV1Q06541 321 aa5.29□□□□□ -1.56
SEC20YDR498C SOG2Q08817 791 aa5.29□□□□□ -1.56
SEC20YDR498C MED2Q12124 431 aa5.29□□□□□ -1.56
SEC20YDR498C SPC3Q12133 184 aa5.29□□□□□ -1.56
SEC20YDR498C GLO4Q12320 285 aa5.29□□□□□ -1.56
SEC20YDR498C DCP1Q12517 231 aaPredicted RBP5.29□□□□□ -1.56
SEC20YDR498C REP1P03871 373 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms