RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	COS111	P38308	924 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	FTH1	P38310	465 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	RCK1	P38622	512 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	RFC4	P40339	323 aa	Known RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	GAB1	P41733	394 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	AAD10	P47182	288 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	NIT3	P49954	291 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	MRPS16	Q02608	121 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	SNO1	Q03144	224 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	BUR2	Q05949	395 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	YLR413W	Q06689	675 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	ESC8	Q08119	714 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	ZEO1	Q08245	113 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	AEP3	Q12089	606 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	TMS1	Q12116	473 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	PKH2	Q12236	1081 aa	Known RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	RMD5	Q12508	421 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	PRB1	P09232	635 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	RPS4A	P0CX35	261 aa	Known RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	RPS4B	P0CX36	261 aa	Known RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	UTR1	P21373	530 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	NAM9	P27929	486 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	IDH2	P28241	369 aa	Known RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	ECM29	P38737	1868 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	HTD2	P38790	280 aa	Known RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	PEX28	P38848	579 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	AXL2	P38928	823 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	AIM10	P39965	576 aa	Known RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	HAT2	P39984	401 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	PRE6	P40303	254 aa	Known RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	PAN6	P40459	309 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	GNA1	P43577	159 aa	Predicted RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	NET1	P47035	1189 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	YHC3	P47040	408 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	IBA57	P47158	497 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	SKP1	P52286	194 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	PMT5	P52867	743 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	YGL159W	P53110	370 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	BUD9	P53226	547 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	GOR1	P53839	350 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	REC102	Q02721	264 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	YPR091C	Q06833	770 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	GLO4	Q12320	285 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	MRP10	O75012	95 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	PET9	P18239	318 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	IFM1	P25038	676 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	TCM62	P38228	572 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	CCZ1	P38273	704 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	YMR144W	P40214	342 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	AYR1	P40471	297 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	TES1	P41903	349 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	GDS1	P41913	522 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	PMT4	P46971	762 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	YAE1	P47118	141 aa	Predicted RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	TRM44	Q02648	567 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	PNG1	Q02890	363 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	YMR087W	Q04299	284 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	RRN11	Q04712	507 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	GPN3	Q06543	272 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	HBT1	Q07653	1046 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	ICL2	Q12031	575 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	ATG41	Q12048	136 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
UPC2	YDR213W	RPN5	Q12250	445 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	ARP7	Q12406	477 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	AHA1	Q12449	350 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	YLR422W	Q06409	1932 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	HIS1	P00498	297 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	RAS1	P01119	309 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	STE12	P13574	688 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	TKL1	P23254	680 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	MSN4	P33749	630 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	WBP1	P33767	430 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	YBR053C	P38235	358 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	AIM46	P38885	310 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	SLM1	P40485	686 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	TAX4	P47030	604 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	AIM25	P47140	327 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	SOK2	P53438	785 aa	Predicted RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	NAM8	Q00539	523 aa	Known RBP	4.05	□□□□□ -1.76
UPC2	YDR213W	NUP100	Q02629	959 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	YLR173W	Q06247	608 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	EAF1	Q06337	982 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	ICT1	Q12385	394 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	CTF3	Q12748	733 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	YLR099W-A	Q3E798	87 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	Q0142	Q9ZZW4	58 aa		4.05	□□□□□ -1.76
UPC2	YDR213W	AI1	P03875	834 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	LEU4	P06208	619 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	SIR2	P06700	562 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	BUD5	P25300	642 aa	Predicted RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	COQ2	P32378	372 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	VPH1	P32563	840 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	CDC13	P32797	924 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	MAK5	P38112	773 aa	Predicted RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	PRS3	P38689	320 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	LNP1	P38878	278 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	UTP25	P40498	721 aa	Known RBP	4.04	□□□□□ -1.76
UPC2	YDR213W	HIS6	P40545	261 aa		4.04	□□□□□ -1.76
UPC2	YDR213W	PSA1	P41940	361 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms