RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C TEF1P02994 458 aaKnown RBP4.32□□□□□ -1.72
NUP42YDR192C MRPL8P22353 238 aa4.32□□□□□ -1.72
NUP42YDR192C AAT2P23542 418 aaKnown RBP4.32□□□□□ -1.72
NUP42YDR192C RPS2P25443 254 aaKnown RBP4.32□□□□□ -1.72
NUP42YDR192C DCC1P25559 380 aa4.32□□□□□ -1.72
NUP42YDR192C YCR090CP25654 182 aaKnown RBP4.32□□□□□ -1.72
NUP42YDR192C TRS65P32893 560 aa4.32□□□□□ -1.72
NUP42YDR192C GCS1P35197 352 aa4.32□□□□□ -1.72
NUP42YDR192C PHO89P38361 574 aa4.32□□□□□ -1.72
NUP42YDR192C LRP1P38801 184 aaKnown RBP4.32□□□□□ -1.72
NUP42YDR192C MET30P39014 640 aa4.32□□□□□ -1.72
NUP42YDR192C RPH1P39956 796 aa4.32□□□□□ -1.72
NUP42YDR192C ALG8P40351 577 aa4.32□□□□□ -1.72
NUP42YDR192C AZF1P41696 914 aa4.32□□□□□ -1.72
NUP42YDR192C BOL2P53082 120 aa4.32□□□□□ -1.72
NUP42YDR192C YNL143CP53908 130 aa4.32□□□□□ -1.72
NUP42YDR192C SPP2Q02521 185 aa4.32□□□□□ -1.72
NUP42YDR192C FMN1Q03778 218 aa4.32□□□□□ -1.72
NUP42YDR192C NUP53Q03790 475 aa4.32□□□□□ -1.72
NUP42YDR192C YDR131CQ03899 556 aa4.32□□□□□ -1.72
NUP42YDR192C HEL2Q05580 639 aaKnown RBP4.32□□□□□ -1.72
NUP42YDR192C RBS1Q05672 457 aaKnown RBP4.32□□□□□ -1.72
NUP42YDR192C YPR114WQ06107 315 aa4.32□□□□□ -1.72
NUP42YDR192C BCP1Q06338 283 aa4.32□□□□□ -1.72
NUP42YDR192C RUP1Q12242 671 aa4.32□□□□□ -1.72
NUP42YDR192C ICT1Q12385 394 aa4.32□□□□□ -1.72
NUP42YDR192C PDH1Q12428 516 aaKnown RBP4.32□□□□□ -1.72
NUP42YDR192C PEX11Q12462 236 aa4.32□□□□□ -1.72
NUP42YDR192C NOT5Q12514 560 aaPredicted RBP4.32□□□□□ -1.72
NUP42YDR192C YOR338WQ99326 363 aa4.32□□□□□ -1.72
NUP42YDR192C RAD3P06839 778 aa4.31□□□□□ -1.72
NUP42YDR192C NSP1P14907 823 aaKnown RBP4.31□□□□□ -1.72
NUP42YDR192C DAL81P21657 970 aa4.31□□□□□ -1.72
NUP42YDR192C IDH2P28241 369 aaKnown RBP4.31□□□□□ -1.72
NUP42YDR192C SIN4P32259 974 aa4.31□□□□□ -1.72
NUP42YDR192C AEP1P32493 518 aa4.31□□□□□ -1.72
NUP42YDR192C YPT52P36018 234 aaKnown RBP4.31□□□□□ -1.72
NUP42YDR192C PIM1P36775 1133 aa4.31□□□□□ -1.72
NUP42YDR192C ARA1P38115 344 aa4.31□□□□□ -1.72
NUP42YDR192C YHI9P38765 294 aa4.31□□□□□ -1.72
NUP42YDR192C SEO1P39709 593 aa4.31□□□□□ -1.72
NUP42YDR192C POP1P41812 875 aa4.31□□□□□ -1.72
NUP42YDR192C TES1P41903 349 aaKnown RBP4.31□□□□□ -1.72
NUP42YDR192C VMA10P48836 114 aaKnown RBP4.31□□□□□ -1.72
NUP42YDR192C CLD1P53264 445 aa4.31□□□□□ -1.72
NUP42YDR192C GTR2P53290 341 aa4.31□□□□□ -1.72
NUP42YDR192C CUS2P53830 285 aaPredicted RBP4.31□□□□□ -1.72
NUP42YDR192C LSM3P57743 89 aaKnown RBP4.31□□□□□ -1.72
NUP42YDR192C SMA1Q02651 245 aa4.31□□□□□ -1.72
NUP42YDR192C PNG1Q02890 363 aa4.31□□□□□ -1.72
NUP42YDR192C ERB1Q04660 807 aaKnown RBP4.31□□□□□ -1.72
NUP42YDR192C VPS74Q06385 345 aa4.31□□□□□ -1.72
NUP42YDR192C GRS2Q06817 618 aa4.31□□□□□ -1.72
NUP42YDR192C UAF30Q08747 228 aa4.31□□□□□ -1.72
NUP42YDR192C YPQ1Q12010 308 aa4.31□□□□□ -1.72
NUP42YDR192C NSL1Q12143 216 aa4.31□□□□□ -1.72
NUP42YDR192C MDY2Q12285 212 aa4.31□□□□□ -1.72
NUP42YDR192C LAA1P39526 2014 aa4.3□□□□□ -1.72
NUP42YDR192C GLK1P17709 500 aaKnown RBP4.3□□□□□ -1.72
NUP42YDR192C ARF2P19146 181 aaKnown RBP4.3□□□□□ -1.72
NUP42YDR192C CLN1P20437 546 aa4.3□□□□□ -1.72
NUP42YDR192C PPH22P23595 377 aa4.3□□□□□ -1.72
NUP42YDR192C SPR1P32603 445 aa4.3□□□□□ -1.72
NUP42YDR192C RML2P32611 393 aa4.3□□□□□ -1.72
NUP42YDR192C TFB1P32776 642 aa4.3□□□□□ -1.72
NUP42YDR192C YME2P32843 850 aa4.3□□□□□ -1.72
NUP42YDR192C RFC3P38629 340 aa4.3□□□□□ -1.72
NUP42YDR192C HEM14P40012 539 aa4.3□□□□□ -1.72
NUP42YDR192C VMA13P41807 478 aaKnown RBP4.3□□□□□ -1.72
NUP42YDR192C AIM23P47015 356 aa4.3□□□□□ -1.72
NUP42YDR192C ASN2P49090 572 aaKnown RBP4.3□□□□□ -1.72
NUP42YDR192C NUP84P52891 726 aa4.3□□□□□ -1.72
NUP42YDR192C FLC3P53121 802 aa4.3□□□□□ -1.72
NUP42YDR192C TRM112P53738 135 aaPredicted RBP4.3□□□□□ -1.72
NUP42YDR192C GOR1P53839 350 aa4.3□□□□□ -1.72
NUP42YDR192C CIK1Q01649 594 aa4.3□□□□□ -1.72
NUP42YDR192C SKO1Q02100 647 aa4.3□□□□□ -1.72
NUP42YDR192C IRC15Q02733 499 aa4.3□□□□□ -1.72
NUP42YDR192C PIR3Q03180 325 aa4.3□□□□□ -1.72
NUP42YDR192C MMT1Q03218 510 aa4.3□□□□□ -1.72
NUP42YDR192C YMR209CQ03648 457 aa4.3□□□□□ -1.72
NUP42YDR192C ROY1Q04847 553 aa4.3□□□□□ -1.72
NUP42YDR192C ATG38Q05789 226 aaKnown RBP4.3□□□□□ -1.72
NUP42YDR192C SSQ1Q05931 657 aaPredicted RBP4.3□□□□□ -1.72
NUP42YDR192C BNA5Q05979 453 aa4.3□□□□□ -1.72
NUP42YDR192C PHO92Q06390 306 aa4.3□□□□□ -1.72
NUP42YDR192C COS7Q07788 383 aa4.3□□□□□ -1.72
NUP42YDR192C YOL019WQ08157 551 aa4.3□□□□□ -1.72
NUP42YDR192C MED2Q12124 431 aa4.3□□□□□ -1.72
NUP42YDR192C LEU4P06208 619 aaKnown RBP4.29□□□□□ -1.72
NUP42YDR192C CPA1P07258 411 aaKnown RBP4.29□□□□□ -1.72
NUP42YDR192C POL30P15873 258 aaKnown RBP4.29□□□□□ -1.72
NUP42YDR192C PHO84P25297 587 aaKnown RBP4.29□□□□□ -1.72
NUP42YDR192C YCR043CP25361 127 aa4.29□□□□□ -1.72
NUP42YDR192C CSM1P25651 190 aa4.29□□□□□ -1.72
NUP42YDR192C BEM1P29366 551 aa4.29□□□□□ -1.72
NUP42YDR192C SPS19P32573 292 aaKnown RBP4.29□□□□□ -1.72
NUP42YDR192C PRP18P33411 251 aaPredicted RBP4.29□□□□□ -1.72
NUP42YDR192C SKT5P34226 696 aa4.29□□□□□ -1.72
NUP42YDR192C LDB7P38210 180 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms