RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C YBR056WP38081 501 aa2.76□□□□□ -1.97
SHG1YBR258C CHK1P38147 527 aa2.76□□□□□ -1.97
SHG1YBR258C MLH1P38920 769 aa2.76□□□□□ -1.97
SHG1YBR258C JEM1P40358 645 aa2.76□□□□□ -1.97
SHG1YBR258C PAN6P40459 309 aa2.76□□□□□ -1.97
SHG1YBR258C EFM4P40516 257 aa2.76□□□□□ -1.97
SHG1YBR258C COS1P53822 381 aa2.76□□□□□ -1.97
SHG1YBR258C CWC25P53854 179 aaKnown RBP2.76□□□□□ -1.97
SHG1YBR258C YDR541CQ03049 344 aa2.76□□□□□ -1.97
SHG1YBR258C SXM1Q04175 944 aaKnown RBP2.76□□□□□ -1.97
SHG1YBR258C SMA2Q04658 369 aa2.76□□□□□ -1.97
SHG1YBR258C HRI1Q05905 244 aaKnown RBP2.76□□□□□ -1.97
SHG1YBR258C MDM36Q06820 579 aa2.76□□□□□ -1.97
SHG1YBR258C YOR097CQ12274 175 aaPredicted RBP2.76□□□□□ -1.97
SHG1YBR258C PAR32Q12515 295 aaKnown RBP2.76□□□□□ -1.97
SHG1YBR258C PAB1P04147 577 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
SHG1YBR258C CDC21P06785 304 aa2.75□□□□□ -1.97
SHG1YBR258C DST1P07273 309 aa2.75□□□□□ -1.97
SHG1YBR258C DAL2P25335 343 aa2.75□□□□□ -1.97
SHG1YBR258C RRP7P25368 297 aaPredicted RBP2.75□□□□□ -1.97
SHG1YBR258C POP5P28005 173 aa2.75□□□□□ -1.97
SHG1YBR258C CSE1P33307 960 aa2.75□□□□□ -1.97
SHG1YBR258C SDS24P38314 527 aa2.75□□□□□ -1.97
SHG1YBR258C LIF1P53150 421 aa2.75□□□□□ -1.97
SHG1YBR258C GIS2P53849 153 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
SHG1YBR258C NUP116Q02630 1113 aa2.75□□□□□ -1.97
SHG1YBR258C RRG7Q08774 242 aaPredicted RBP2.75□□□□□ -1.97
SHG1YBR258C RNH203Q12338 110 aa2.75□□□□□ -1.97
SHG1YBR258C SKS1Q12505 502 aa2.75□□□□□ -1.97
SHG1YBR258C YEF1P32622 495 aa2.74□□□□□ -1.97
SHG1YBR258C NRP1P32770 719 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
SHG1YBR258C MNS1P32906 549 aa2.74□□□□□ -1.97
SHG1YBR258C SKN1P33336 771 aa2.74□□□□□ -1.97
SHG1YBR258C ATP3P38077 311 aaKnown RBP2.74□□□□□ -1.97
SHG1YBR258C QDR3P38227 689 aa2.74□□□□□ -1.97
SHG1YBR258C SBE22P38814 852 aa2.74□□□□□ -1.97
SHG1YBR258C BAT1P38891 393 aaKnown RBP2.74□□□□□ -1.97
SHG1YBR258C SEC28P40509 296 aaKnown RBP2.74□□□□□ -1.97
SHG1YBR258C PAC11P40960 533 aa2.74□□□□□ -1.97
SHG1YBR258C TOS3P43637 560 aa2.74□□□□□ -1.97
SHG1YBR258C MDE1P47095 244 aa2.74□□□□□ -1.97
SHG1YBR258C STE24P47154 453 aa2.74□□□□□ -1.97
SHG1YBR258C RCF1Q03713 159 aa2.74□□□□□ -1.97
SHG1YBR258C HRT3Q12347 344 aa2.74□□□□□ -1.97
SHG1YBR258C ADH2P00331 348 aaKnown RBP2.73□□□□□ -1.97
SHG1YBR258C RPL12AP0CX53 165 aaKnown RBP2.73□□□□□ -1.97
SHG1YBR258C RPL12BP0CX54 165 aa2.73□□□□□ -1.97
SHG1YBR258C CLN3P13365 580 aa2.73□□□□□ -1.97
SHG1YBR258C CAP2P13517 287 aa2.73□□□□□ -1.97
SHG1YBR258C EXG1P23776 448 aaKnown RBP2.73□□□□□ -1.97
SHG1YBR258C MNE1P24720 663 aa2.73□□□□□ -1.97
SHG1YBR258C PHO91P27514 894 aa2.73□□□□□ -1.97
SHG1YBR258C YEL045CP32616 141 aa2.73□□□□□ -1.97
SHG1YBR258C TOA2P32774 122 aa2.73□□□□□ -1.97
SHG1YBR258C TVP38P36164 337 aa2.73□□□□□ -1.97
SHG1YBR258C SWD3P38123 315 aa2.73□□□□□ -1.97
SHG1YBR258C COX14P39103 70 aa2.73□□□□□ -1.97
SHG1YBR258C GDI1P39958 451 aaKnown RBP2.73□□□□□ -1.97
SHG1YBR258C YER079WP40052 210 aaKnown RBP2.73□□□□□ -1.97
SHG1YBR258C PRE5P40302 234 aaKnown RBP2.73□□□□□ -1.97
SHG1YBR258C TOS2P50078 622 aa2.73□□□□□ -1.97
SHG1YBR258C PMT5P52867 743 aa2.73□□□□□ -1.97
SHG1YBR258C SDT1P53078 280 aa2.73□□□□□ -1.97
SHG1YBR258C MLC1P53141 149 aa2.73□□□□□ -1.97
SHG1YBR258C MEH1Q02205 184 aa2.73□□□□□ -1.97
SHG1YBR258C CCE1Q03702 353 aa2.73□□□□□ -1.97
SHG1YBR258C URC2Q04411 772 aa2.73□□□□□ -1.97
SHG1YBR258C NDE2Q07500 545 aa2.73□□□□□ -1.97
SHG1YBR258C NCA2Q12374 616 aa2.73□□□□□ -1.97
SHG1YBR258C ATP1P07251 545 aaKnown RBP2.72□□□□□ -1.97
SHG1YBR258C REV1P12689 985 aa2.72□□□□□ -1.97
SHG1YBR258C RPB5P20434 215 aa2.72□□□□□ -1.97
SHG1YBR258C DAL82P21705 255 aa2.72□□□□□ -1.97
SHG1YBR258C RSA4P25382 515 aaKnown RBP2.72□□□□□ -1.97
SHG1YBR258C RME1P32338 300 aaKnown RBP2.72□□□□□ -1.97
SHG1YBR258C SKT5P34226 696 aa2.72□□□□□ -1.97
SHG1YBR258C LSM4P40070 187 aaKnown RBP2.72□□□□□ -1.97
SHG1YBR258C YJR085CP47131 105 aaKnown RBP2.72□□□□□ -1.97
SHG1YBR258C ASN2P49090 572 aaKnown RBP2.72□□□□□ -1.97
SHG1YBR258C SHE10P53075 577 aa2.72□□□□□ -1.97
SHG1YBR258C ROG1P53118 685 aa2.72□□□□□ -1.97
SHG1YBR258C RRN9P53437 365 aa2.72□□□□□ -1.97
SHG1YBR258C MTQ1P53944 314 aa2.72□□□□□ -1.97
SHG1YBR258C PEX25Q02969 394 aa2.72□□□□□ -1.97
SHG1YBR258C IPK1Q06667 281 aa2.72□□□□□ -1.97
SHG1YBR258C IRC25Q07951 179 aa2.72□□□□□ -1.97
SHG1YBR258C CUE5Q08412 411 aaKnown RBP2.72□□□□□ -1.97
SHG1YBR258C RBD2Q12270 262 aa2.72□□□□□ -1.97
SHG1YBR258C SRN2Q99176 213 aa2.72□□□□□ -1.97
SHG1YBR258C PDE2P06776 526 aa2.71□□□□□ -1.98
SHG1YBR258C LDB16P25587 256 aa2.71□□□□□ -1.98
SHG1YBR258C DPH5P32469 300 aaPredicted RBP2.71□□□□□ -1.98
SHG1YBR258C YSC83P32792 385 aa2.71□□□□□ -1.98
SHG1YBR258C RXT2P38255 430 aa2.71□□□□□ -1.98
SHG1YBR258C VPS45P38932 577 aa2.71□□□□□ -1.98
SHG1YBR258C MRM2P53123 320 aa2.71□□□□□ -1.98
SHG1YBR258C RTT102P53330 157 aa2.71□□□□□ -1.98
SHG1YBR258C MHR1Q06630 226 aa2.71□□□□□ -1.98
SHG1YBR258C YFH1Q07540 174 aa2.71□□□□□ -1.98
SHG1YBR258C CMS1Q07897 291 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms