RNA–Protein interactions for RNA: YBR006W

UGA2, Transcript of Succinate semialdehyde dehydrogenase, yeast

Gene UGA2, Length 1,494 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UGA2	YBR006W	RHO4	Q00246	291 aa		4.59	□□□□□ -1.67
UGA2	YBR006W	YMR099C	Q03161	297 aa	Known RBP	4.59	□□□□□ -1.67
UGA2	YBR006W	SPC19	Q03954	165 aa		4.59	□□□□□ -1.67
UGA2	YBR006W	RAD30	Q04049	632 aa		4.59	□□□□□ -1.67
UGA2	YBR006W	LRS4	Q04087	347 aa	Known RBP	4.59	□□□□□ -1.67
UGA2	YBR006W	RRN11	Q04712	507 aa		4.59	□□□□□ -1.67
UGA2	YBR006W	IRC13	Q08630	104 aa		4.59	□□□□□ -1.67
UGA2	YBR006W	MMT2	Q08970	484 aa		4.59	□□□□□ -1.67
UGA2	YBR006W	LEU9	Q12166	604 aa	Known RBP	4.59	□□□□□ -1.67
UGA2	YBR006W	DBP10	Q12389	995 aa	Known RBP	4.59	□□□□□ -1.67
UGA2	YBR006W	PNO1	Q99216	274 aa	Known RBP	4.59	□□□□□ -1.67
UGA2	YBR006W	HOM3	P10869	527 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	ZWF1	P11412	505 aa	Known RBP	4.58	□□□□□ -1.68
UGA2	YBR006W	KSS1	P14681	368 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	DBP3	P20447	523 aa	Known RBP	4.58	□□□□□ -1.68
UGA2	YBR006W	SRB5	P32585	307 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	LOT5	P34234	306 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	OAR1	P35731	278 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	LHS1	P36016	881 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	MNL1	P38888	796 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	LTP1	P40347	161 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	YJL068C	P40363	299 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	YPS6	P40583	537 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	RPL10	P41805	221 aa	Known RBP	4.58	□□□□□ -1.68
UGA2	YBR006W	YGR201C	P42936	225 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	QRI7	P43122	407 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	CAF16	P43569	289 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	TMA20	P89886	181 aa	Predicted RBP	4.58	□□□□□ -1.68
UGA2	YBR006W	YMR310C	Q04867	317 aa	Predicted RBP	4.58	□□□□□ -1.68
UGA2	YBR006W	RQC1	Q05468	723 aa	Known RBP	4.58	□□□□□ -1.68
UGA2	YBR006W	ATG17	Q06410	417 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	ATG33	Q06485	197 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	SFM1	Q12314	213 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	NPC2	Q12408	173 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	RIB3	Q99258	208 aa		4.58	□□□□□ -1.68
UGA2	YBR006W	HMG1	P12683	1054 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	RER1	P25560	188 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	TAH1	P25638	111 aa	Predicted RBP	4.57	□□□□□ -1.68
UGA2	YBR006W	GSH1	P32477	678 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	GDH2	P33327	1092 aa	Known RBP	4.57	□□□□□ -1.68
UGA2	YBR006W	NUF2	P33895	451 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	TUL1	P36096	758 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	TPA1	P40032	644 aa	Known RBP	4.57	□□□□□ -1.68
UGA2	YBR006W	FET5	P43561	622 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	CAK1	P43568	368 aa	Predicted RBP	4.57	□□□□□ -1.68
UGA2	YBR006W	HOC1	P47124	396 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	UBC9	P50623	157 aa	Predicted RBP	4.57	□□□□□ -1.68
UGA2	YBR006W	HOS2	P53096	452 aa	Predicted RBP	4.57	□□□□□ -1.68
UGA2	YBR006W	SLD3	P53135	668 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	PRM8	P53174	237 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	CDH1	P53197	566 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	DAM1	P53267	343 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	SWP1	Q02795	286 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	RSC9	Q03124	581 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	MFB1	Q04922	465 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	STP3	Q05937	343 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	ARO10	Q06408	635 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	DCI1	Q08558	271 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	BSC1	Q12140	328 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	RKM5	Q12367	367 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	MRX4	Q12467	430 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	YKL033W-A	Q86ZR7	236 aa		4.57	□□□□□ -1.68
UGA2	YBR006W	TPK3	P05986	398 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	TAL1	P15019	335 aa	Known RBP	4.56	□□□□□ -1.68
UGA2	YBR006W	RPB5	P20434	215 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	URE2	P23202	354 aa	Known RBP	4.56	□□□□□ -1.68
UGA2	YBR006W	CNA1	P23287	553 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	SED4	P25365	1065 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	RHB1	P25378	209 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	CWP1	P28319	239 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	YJU2	P28320	278 aa	Predicted RBP	4.56	□□□□□ -1.68
UGA2	YBR006W	YMC1	P32331	307 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	HOG1	P32485	435 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	GOS1	P38736	223 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	EGD2	P38879	174 aa	Known RBP	4.56	□□□□□ -1.68
UGA2	YBR006W	RCY1	P39531	840 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	PRP39	P39682	629 aa	Known RBP	4.56	□□□□□ -1.68
UGA2	YBR006W	SPO73	P40031	143 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	COG3	P40094	801 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	PRE6	P40303	254 aa	Known RBP	4.56	□□□□□ -1.68
UGA2	YBR006W	MSS2	P40990	351 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	STE24	P47154	453 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	MEP3	P53390	489 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	COG5	P53951	403 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	SED5	Q01590	340 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	YPL107W	Q02873	248 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	RSN1	Q03516	953 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	RIM13	Q03792	727 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	SMP3	Q04174	516 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	BNA5	Q05979	453 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	RTK1	Q12100	620 aa	Predicted RBP	4.56	□□□□□ -1.68
UGA2	YBR006W	GLE1	Q12315	538 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	SKS1	Q12505	502 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	YPL119C-A	Q3E751	87 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	MHF1	Q3E835	90 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	RPP2A	P05319	106 aa	Known RBP	4.56	□□□□□ -1.68
UGA2	YBR006W	RPL1A	P0CX43	217 aa	Known RBP	4.56	□□□□□ -1.68
UGA2	YBR006W	RPL1B	P0CX44	217 aa	Known RBP	4.56	□□□□□ -1.68
UGA2	YBR006W	HOP1	P20050	605 aa		4.56	□□□□□ -1.68
UGA2	YBR006W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms