RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C ATG10Q07879 167 aa2.17□□□□□ -2.06
CLN3YAL040C SGT1Q08446 395 aa2.17□□□□□ -2.06
CLN3YAL040C GPN2Q08726 347 aaPredicted RBP2.17□□□□□ -2.06
CLN3YAL040C FMP40Q08968 688 aaPredicted RBP2.17□□□□□ -2.06
CLN3YAL040C PRS5Q12265 496 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C JLP1Q12358 412 aa2.17□□□□□ -2.06
CLN3YAL040C AHA1Q12449 350 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C YIL002W-AQ3E7Z5 69 aa2.17□□□□□ -2.06
CLN3YAL040C YOR019WQ99248 730 aa2.17□□□□□ -2.06
CLN3YAL040C SAS5Q99314 248 aa2.17□□□□□ -2.06
CLN3YAL040C YOR338WQ99326 363 aa2.17□□□□□ -2.06
CLN3YAL040C HRP1Q99383 534 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C BEM2P39960 2167 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C TPK2P06245 380 aa2.17□□□□□ -2.06
CLN3YAL040C CPA1P07258 411 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C YML003WP0CF16 290 aa2.17□□□□□ -2.06
CLN3YAL040C ARO3P14843 370 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C TAL1P15019 335 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C EPT1P22140 391 aa2.17□□□□□ -2.06
CLN3YAL040C ERG6P25087 383 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C PUP3P25451 205 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C IDH2P28241 369 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C CRM1P30822 1084 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C NTH1P32356 751 aa2.17□□□□□ -2.06
CLN3YAL040C SSE2P32590 693 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C RML2P32611 393 aa2.17□□□□□ -2.06
CLN3YAL040C NRP1P32770 719 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
CLN3YAL040C CSE1P33307 960 aa2.17□□□□□ -2.06
CLN3YAL040C CBF5P33322 483 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
CLN3YAL040C HCS1P34243 683 aa2.17□□□□□ -2.06
CLN3YAL040C YUH1P35127 236 aa2.17□□□□□ -2.06
CLN3YAL040C TCD2P36101 447 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C GMH1P36125 273 aa2.17□□□□□ -2.06
CLN3YAL040C CAF4P36130 643 aa2.17□□□□□ -2.06
CLN3YAL040C ROT2P38138 954 aa2.17□□□□□ -2.06
CLN3YAL040C IST2P38250 946 aa2.17□□□□□ -2.06
CLN3YAL040C IML3P38265 245 aa2.17□□□□□ -2.06
CLN3YAL040C INM1P38710 295 aa2.17□□□□□ -2.06
CLN3YAL040C CYC2P38909 366 aa2.17□□□□□ -2.06
CLN3YAL040C MLH1P38920 769 aa2.17□□□□□ -2.06
CLN3YAL040C PAC2P39937 518 aa2.17□□□□□ -2.06
CLN3YAL040C ECM10P39987 644 aa2.17□□□□□ -2.06
CLN3YAL040C LAS21P40367 830 aa2.17□□□□□ -2.06
CLN3YAL040C ELP2P42935 788 aa2.17□□□□□ -2.06
CLN3YAL040C YFR020WP43600 232 aa2.17□□□□□ -2.06
CLN3YAL040C FMP33P46998 180 aa2.17□□□□□ -2.06
CLN3YAL040C TOM22P49334 152 aa2.17□□□□□ -2.06
CLN3YAL040C MRK1P50873 501 aa2.17□□□□□ -2.06
CLN3YAL040C FLC3P53121 802 aa2.17□□□□□ -2.06
CLN3YAL040C LCL3P53153 274 aa2.17□□□□□ -2.06
CLN3YAL040C SWC4P53201 476 aa2.17□□□□□ -2.06
CLN3YAL040C FHN1P53279 174 aa2.17□□□□□ -2.06
CLN3YAL040C MPS1P54199 764 aa2.17□□□□□ -2.06
CLN3YAL040C SMA1Q02651 245 aa2.17□□□□□ -2.06
CLN3YAL040C YMR010WQ03687 405 aa2.17□□□□□ -2.06
CLN3YAL040C YDR239CQ03780 787 aa2.17□□□□□ -2.06
CLN3YAL040C YDR124WQ04608 324 aa2.17□□□□□ -2.06
CLN3YAL040C SPC2Q04969 178 aa2.17□□□□□ -2.06
CLN3YAL040C RBS1Q05672 457 aaKnown RBP2.17□□□□□ -2.06
CLN3YAL040C STP3Q05937 343 aa2.17□□□□□ -2.06
CLN3YAL040C YPR172WQ06608 200 aa2.17□□□□□ -2.06
CLN3YAL040C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
CLN3YAL040C MUM3Q08750 479 aa2.17□□□□□ -2.06
CLN3YAL040C MLH3Q12083 715 aa2.17□□□□□ -2.06
CLN3YAL040C ADF1Q2V2Q1 113 aa2.17□□□□□ -2.06
CLN3YAL040C TIM9O74700 87 aa2.16□□□□□ -2.06
CLN3YAL040C RAS2P01120 322 aaKnown RBP2.16□□□□□ -2.06
CLN3YAL040C GCD2P12754 651 aaPredicted RBP2.16□□□□□ -2.06
CLN3YAL040C MSS116P15424 664 aaKnown RBP2.16□□□□□ -2.06
CLN3YAL040C UGA1P17649 471 aa2.16□□□□□ -2.06
CLN3YAL040C FPR1P20081 114 aaKnown RBP2.16□□□□□ -2.06
CLN3YAL040C SGV1P23293 657 aaKnown RBP2.16□□□□□ -2.06
CLN3YAL040C YSR3P23501 404 aa2.16□□□□□ -2.06
CLN3YAL040C VMA16P23968 213 aa2.16□□□□□ -2.06
CLN3YAL040C FAA1P30624 700 aaKnown RBP2.16□□□□□ -2.06
CLN3YAL040C TFC1P32367 649 aa2.16□□□□□ -2.06
CLN3YAL040C MGM101P32787 269 aaKnown RBP2.16□□□□□ -2.06
CLN3YAL040C COX13P32799 129 aa2.16□□□□□ -2.06
CLN3YAL040C RPS1AP33442 255 aaKnown RBP2.16□□□□□ -2.06
CLN3YAL040C CBP4P37267 147 aa2.16□□□□□ -2.06
CLN3YAL040C ATG7P38862 630 aa2.16□□□□□ -2.06
CLN3YAL040C FAD1P38913 306 aa2.16□□□□□ -2.06
CLN3YAL040C HRB1P38922 454 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
CLN3YAL040C MTW1P39731 289 aa2.16□□□□□ -2.06
CLN3YAL040C RPH1P39956 796 aa2.16□□□□□ -2.06
CLN3YAL040C VRG4P40107 337 aa2.16□□□□□ -2.06
CLN3YAL040C DIM1P41819 318 aaKnown RBP2.16□□□□□ -2.06
CLN3YAL040C GCN20P43535 752 aaKnown RBP2.16□□□□□ -2.06
CLN3YAL040C FMP32P43557 207 aa2.16□□□□□ -2.06
CLN3YAL040C PMT4P46971 762 aa2.16□□□□□ -2.06
CLN3YAL040C YJR030CP47101 745 aa2.16□□□□□ -2.06
CLN3YAL040C YGR149WP48236 432 aa2.16□□□□□ -2.06
CLN3YAL040C KEL2P50090 882 aa2.16□□□□□ -2.06
CLN3YAL040C YGR015CP53208 328 aa2.16□□□□□ -2.06
CLN3YAL040C GPI1P53306 609 aa2.16□□□□□ -2.06
CLN3YAL040C TDA7P53882 636 aaPredicted RBP2.16□□□□□ -2.06
CLN3YAL040C SKO1Q02100 647 aa2.16□□□□□ -2.06
CLN3YAL040C RIM13Q03792 727 aa2.16□□□□□ -2.06
CLN3YAL040C ECM18Q04623 453 aa2.16□□□□□ -2.06
CLN3YAL040C YFT2Q06676 274 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 87.2 ms