RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W IMO32P53219 342 aa2.1□□□□□ -2.07
SEC16YPL085W RRN9P53437 365 aa2.1□□□□□ -2.07
SEC16YPL085W GIS1Q03833 894 aa2.1□□□□□ -2.07
SEC16YPL085W REH1Q06709 432 aa2.1□□□□□ -2.07
SEC16YPL085W OXR1Q08952 273 aa2.1□□□□□ -2.07
SEC16YPL085W UPC2Q12151 913 aa2.1□□□□□ -2.07
SEC16YPL085W VAM3Q12241 283 aa2.1□□□□□ -2.07
SEC16YPL085W LDB17Q12342 491 aa2.1□□□□□ -2.07
SEC16YPL085W MLP1Q02455 1875 aaKnown RBP2.1□□□□□ -2.07
SEC16YPL085W HTA1P04911 132 aaKnown RBP2.1□□□□□ -2.07
SEC16YPL085W UNG1P12887 359 aa2.1□□□□□ -2.07
SEC16YPL085W SPT15P13393 240 aaKnown RBP2.1□□□□□ -2.07
SEC16YPL085W GCN3P14741 305 aa2.1□□□□□ -2.07
SEC16YPL085W PEX34P25584 144 aa2.1□□□□□ -2.07
SEC16YPL085W KKQ8P36004 724 aa2.1□□□□□ -2.07
SEC16YPL085W JEN1P36035 616 aa2.1□□□□□ -2.07
SEC16YPL085W IPT1P38954 527 aa2.1□□□□□ -2.07
SEC16YPL085W YEL068CP39977 110 aa2.1□□□□□ -2.07
SEC16YPL085W SLZ1P40167 298 aa2.1□□□□□ -2.07
SEC16YPL085W ULI1P43604 169 aa2.1□□□□□ -2.07
SEC16YPL085W YJR011CP47086 261 aaPredicted RBP2.1□□□□□ -2.07
SEC16YPL085W YAE1P47118 141 aaPredicted RBP2.1□□□□□ -2.07
SEC16YPL085W SSU72P53538 206 aaPredicted RBP2.1□□□□□ -2.07
SEC16YPL085W ALG12P53730 551 aa2.1□□□□□ -2.07
SEC16YPL085W HLR1Q04429 423 aa2.1□□□□□ -2.07
SEC16YPL085W THI73Q07904 523 aa2.1□□□□□ -2.07
SEC16YPL085W MDY2Q12285 212 aa2.1□□□□□ -2.07
SEC16YPL085W RTN2Q12443 393 aa2.1□□□□□ -2.07
SEC16YPL085W YDR524C-BQ3E6R4 66 aa2.1□□□□□ -2.07
SEC16YPL085W CDC4P07834 779 aa2.1□□□□□ -2.07
SEC16YPL085W SSA3P09435 649 aaKnown RBP2.1□□□□□ -2.07
SEC16YPL085W MBR1P23493 339 aa2.1□□□□□ -2.07
SEC16YPL085W NAB2P32505 525 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
SEC16YPL085W CYS4P32582 507 aaKnown RBP2.1□□□□□ -2.07
SEC16YPL085W YPT7P32939 208 aa2.1□□□□□ -2.07
SEC16YPL085W EDS1P38073 919 aa2.1□□□□□ -2.07
SEC16YPL085W MCM7P38132 845 aa2.1□□□□□ -2.07
SEC16YPL085W YBR053CP38235 358 aa2.1□□□□□ -2.07
SEC16YPL085W YBR137WP38276 179 aa2.1□□□□□ -2.07
SEC16YPL085W EHT1P38295 451 aa2.1□□□□□ -2.07
SEC16YPL085W QNS1P38795 714 aaKnown RBP2.1□□□□□ -2.07
SEC16YPL085W MET28P40573 187 aa2.1□□□□□ -2.07
SEC16YPL085W MNT2P53059 558 aa2.1□□□□□ -2.07
SEC16YPL085W YGR015CP53208 328 aa2.1□□□□□ -2.07
SEC16YPL085W YNL115CP53925 644 aa2.1□□□□□ -2.07
SEC16YPL085W AAT1Q01802 451 aa2.1□□□□□ -2.07
SEC16YPL085W RCO1Q04779 684 aa2.1□□□□□ -2.07
SEC16YPL085W PLB3Q08108 686 aa2.1□□□□□ -2.07
SEC16YPL085W ARG4P04076 463 aaPredicted RBP2.1□□□□□ -2.07
SEC16YPL085W GDH1P07262 454 aaKnown RBP2.1□□□□□ -2.07
SEC16YPL085W CHO1P08456 276 aa2.1□□□□□ -2.07
SEC16YPL085W SAM1P10659 382 aaKnown RBP2.1□□□□□ -2.07
SEC16YPL085W KIN3P22209 435 aa2.1□□□□□ -2.07
SEC16YPL085W SED4P25365 1065 aa2.1□□□□□ -2.07
SEC16YPL085W DCC1P25559 380 aa2.1□□□□□ -2.07
SEC16YPL085W CPR3P25719 182 aa2.1□□□□□ -2.07
SEC16YPL085W VAM7P32912 316 aa2.1□□□□□ -2.07
SEC16YPL085W PRY2P36110 329 aa2.1□□□□□ -2.07
SEC16YPL085W BET3P36149 193 aa2.1□□□□□ -2.07
SEC16YPL085W SEO1P39709 593 aa2.1□□□□□ -2.07
SEC16YPL085W APQ12P40532 138 aa2.1□□□□□ -2.07
SEC16YPL085W RTS2P40962 232 aa2.1□□□□□ -2.07
SEC16YPL085W GNA1P43577 159 aaPredicted RBP2.1□□□□□ -2.07
SEC16YPL085W YGR079WP53249 370 aa2.1□□□□□ -2.07
SEC16YPL085W YLR460CP54007 376 aa2.1□□□□□ -2.07
SEC16YPL085W BUR2Q05949 395 aa2.1□□□□□ -2.07
SEC16YPL085W ARR2Q06597 130 aa2.1□□□□□ -2.07
SEC16YPL085W TRM13Q12383 476 aa2.1□□□□□ -2.07
SEC16YPL085W PFK27Q12471 397 aaPredicted RBP2.1□□□□□ -2.07
SEC16YPL085W STF2P16965 84 aa2.09□□□□□ -2.07
SEC16YPL085W URE2P23202 354 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W CHA1P25379 360 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W RPC34P32910 317 aa2.09□□□□□ -2.07
SEC16YPL085W MRT4P33201 236 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W TMA19P35691 167 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W PAC2P39937 518 aa2.09□□□□□ -2.07
SEC16YPL085W VHR1P40522 640 aa2.09□□□□□ -2.07
SEC16YPL085W YIR016WP40572 265 aa2.09□□□□□ -2.07
SEC16YPL085W LSB3P43603 459 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W SSY5P47002 699 aa2.09□□□□□ -2.07
SEC16YPL085W YJR030CP47101 745 aa2.09□□□□□ -2.07
SEC16YPL085W RAI1P53063 387 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W ROG1P53118 685 aa2.09□□□□□ -2.07
SEC16YPL085W MRH4P53166 561 aa2.09□□□□□ -2.07
SEC16YPL085W TIM21P53220 239 aa2.09□□□□□ -2.07
SEC16YPL085W CAC2Q04199 468 aa2.09□□□□□ -2.07
SEC16YPL085W RTT103Q05543 409 aa2.09□□□□□ -2.07
SEC16YPL085W YLR040CQ07988 224 aa2.09□□□□□ -2.07
SEC16YPL085W ATG40Q99325 256 aa2.09□□□□□ -2.07
SEC16YPL085W TDH1P00360 332 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W RPC40P07703 335 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W APE1P14904 514 aa2.09□□□□□ -2.07
SEC16YPL085W NSP1P14907 823 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W KRS1P15180 591 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W YCK2P23292 546 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W DOA4P32571 926 aa2.09□□□□□ -2.07
SEC16YPL085W PUB1P32588 453 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
SEC16YPL085W UGP1P32861 499 aaKnown RBP2.09□□□□□ -2.07
SEC16YPL085W ALP1P38971 573 aa2.09□□□□□ -2.07
SEC16YPL085W QRI7P43122 407 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms