RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	RHO1	P06780	209 aa	Known RBP	5.08	□□□□□ -1.6
NUP1	YOR098C	VPS1	P21576	704 aa	Known RBP	5.08	□□□□□ -1.6
NUP1	YOR098C	CYS4	P32582	507 aa	Known RBP	5.08	□□□□□ -1.6
NUP1	YOR098C	APL3	P38065	1025 aa		5.08	□□□□□ -1.6
NUP1	YOR098C	CUS2	P53830	285 aa	Predicted RBP	5.08	□□□□□ -1.6
NUP1	YOR098C	MRPL22	P53881	309 aa		5.08	□□□□□ -1.6
NUP1	YOR098C	GIM5	Q04493	163 aa		5.08	□□□□□ -1.6
NUP1	YOR098C	GRS2	Q06817	618 aa		5.08	□□□□□ -1.6
NUP1	YOR098C	FSH3	Q99369	266 aa		5.08	□□□□□ -1.6
NUP1	YOR098C	TY4B-H	P0C2J7	1802 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	TY4B-J	P47024	1803 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	ADH2	P00331	348 aa	Known RBP	5.07	□□□□□ -1.6
NUP1	YOR098C	CKA2	P19454	339 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	ATP11	P32453	318 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	MSN2	P33748	704 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	YKL162C	P36052	402 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	LDB7	P38210	180 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	YJL163C	P46996	555 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	YJR011C	P47086	261 aa	Predicted RBP	5.07	□□□□□ -1.6
NUP1	YOR098C	YTP1	P53584	459 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	RPM2	Q02773	1202 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	TAF9	Q05027	157 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	PAM18	Q07914	168 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	YPR1	Q12458	312 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	NHP6B	P11633	99 aa	Known RBP	5.07	□□□□□ -1.6
NUP1	YOR098C	ZRC1	P20107	442 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	YPK3	P38070	525 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	BNA4	P38169	460 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	YBR062C	P38239	180 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	FZO1	P38297	855 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	MMS21	P38632	267 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	SMF2	P38778	549 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	BIG1	P38813	335 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	YPR003C	P53394	754 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	IZH1	Q03419	316 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	YLR224W	Q05947	369 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	AAD15	Q08361	143 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	TIP41	Q12199	356 aa		5.07	□□□□□ -1.6
NUP1	YOR098C	PPA2	P28239	310 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	RAD5	P32849	1169 aa	Predicted RBP	5.06	□□□□□ -1.6
NUP1	YOR098C	UTP25	P40498	721 aa	Known RBP	5.06	□□□□□ -1.6
NUP1	YOR098C	ORC3	P54790	616 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	FAR8	Q05040	523 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	BUR2	Q05949	395 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	YSR3	P23501	404 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	SDS3	P40505	327 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	RIP-Chip
NUP1	YOR098C	KAP114	P53067	1004 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	YLR040C	Q07988	224 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	OSW1	Q08692	278 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	YOR365C	Q08844	703 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	RAD52	P06778	471 aa	Known RBP	5.06	□□□□□ -1.6
NUP1	YOR098C	MET3	P08536	511 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	PYK2	P52489	506 aa	Known RBP	5.06	□□□□□ -1.6
NUP1	YOR098C	PFA5	Q03289	374 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	EBS1	Q03466	884 aa	Known RBP	5.06	□□□□□ -1.6
NUP1	YOR098C	SMP3	Q04174	516 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	ACK1	Q07622	623 aa	Predicted RBP	5.06	□□□□□ -1.6
NUP1	YOR098C	SHS1	Q07657	551 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	FRE7	Q12333	620 aa		5.06	□□□□□ -1.6
NUP1	YOR098C	CDC33	P07260	213 aa	Known RBP	5.05	□□□□□ -1.6
NUP1	YOR098C	IMA3	P0CW40	589 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	IMA4	P0CW41	589 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	GDH2	P33327	1092 aa	Known RBP	5.05	□□□□□ -1.6
NUP1	YOR098C	SPT10	P35208	640 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	YER079W	P40052	210 aa	Known RBP	5.05	□□□□□ -1.6
NUP1	YOR098C	RFC4	P40339	323 aa	Known RBP	5.05	□□□□□ -1.6
NUP1	YOR098C	YIL001W	P40560	513 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	TMA22	P47089	198 aa	Predicted RBP	5.05	□□□□□ -1.6
NUP1	YOR098C	ABM1	P47146	123 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	NUP53	Q03790	475 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	YOL075C	Q08234	1294 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	IMA2	Q08295	589 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	CKI1	P20485	582 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	SPO11	P23179	398 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	TKL1	P23254	680 aa	Known RBP	5.05	□□□□□ -1.6
NUP1	YOR098C	FMP52	P40008	231 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	LCP5	P40079	357 aa	Predicted RBP	5.05	□□□□□ -1.6
NUP1	YOR098C	SAD1	P43589	448 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	BUD32	P53323	261 aa		5.05	□□□□□ -1.6
NUP1	YOR098C	TRP4	P07285	380 aa	Predicted RBP	5.04	□□□□□ -1.6
NUP1	YOR098C	RPL12A	P0CX53	165 aa	Known RBP	5.04	□□□□□ -1.6
NUP1	YOR098C	RPL12B	P0CX54	165 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	RRT12	P25381	491 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	REC114	P32841	428 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	PFS1	P38872	237 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	GLG2	P47011	380 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	UBP8	P50102	471 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	YGR168C	P53293	376 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	DUG3	P53871	357 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	FMP30	Q02883	468 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	YMR114C	Q04471	368 aa	Known RBP	5.04	□□□□□ -1.6
NUP1	YOR098C	YLR122C	Q12312	125 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	PPR1	P07272	904 aa	Predicted RBP	5.04	□□□□□ -1.6
NUP1	YOR098C	FAS2	P19097	1887 aa	Known RBP	5.04	□□□□□ -1.6
NUP1	YOR098C	CDC10	P25342	322 aa	Known RBP	5.04	□□□□□ -1.6
NUP1	YOR098C	YPL068C	Q02749	293 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	GIP3	Q03016	1276 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	GCN5	Q03330	439 aa		5.04	□□□□□ -1.6
NUP1	YOR098C	HSP31	Q04432	237 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms