RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C CBP2P03874 630 aaPredicted RBP3.93□□□□□ -1.78
VPS21YOR089C OSM1P21375 501 aaKnown RBP3.93□□□□□ -1.78
VPS21YOR089C MRPL8P22353 238 aa3.93□□□□□ -1.78
VPS21YOR089C OPY1P38271 328 aa3.93□□□□□ -1.78
VPS21YOR089C STP2P38704 541 aa3.93□□□□□ -1.78
VPS21YOR089C YHC3P47040 408 aa3.93□□□□□ -1.78
VPS21YOR089C RTT101P47050 842 aa3.93□□□□□ -1.78
VPS21YOR089C STE24P47154 453 aa3.93□□□□□ -1.78
VPS21YOR089C AVT4P50944 713 aa3.93□□□□□ -1.78
VPS21YOR089C YGL114WP53134 725 aa3.93□□□□□ -1.78
VPS21YOR089C IBD2P53892 351 aa3.93□□□□□ -1.78
VPS21YOR089C VPS20Q04272 221 aa3.93□□□□□ -1.78
VPS21YOR089C YMR111CQ04461 462 aaPredicted RBP3.93□□□□□ -1.78
VPS21YOR089C SNT309Q06091 175 aaPredicted RBP3.93□□□□□ -1.78
VPS21YOR089C YPR078CQ06813 372 aa3.93□□□□□ -1.78
VPS21YOR089C ALE1Q08548 619 aa3.93□□□□□ -1.78
VPS21YOR089C NCA2Q12374 616 aa3.93□□□□□ -1.78
VPS21YOR089C TPK3P05986 398 aa3.92□□□□□ -1.78
VPS21YOR089C RPL20AP0CX23 172 aaKnown RBP3.92□□□□□ -1.78
VPS21YOR089C RPL20BP0CX24 172 aaPredicted RBP3.92□□□□□ -1.78
VPS21YOR089C SAM2P19358 384 aaKnown RBP3.92□□□□□ -1.78
VPS21YOR089C PMU1P36069 295 aa3.92□□□□□ -1.78
VPS21YOR089C RIB5P38145 238 aa3.92□□□□□ -1.78
VPS21YOR089C LIN1P38852 340 aaPredicted RBP3.92□□□□□ -1.78
VPS21YOR089C GCD10P41814 478 aa3.92□□□□□ -1.78
VPS21YOR089C SPG5P42933 373 aa3.92□□□□□ -1.78
VPS21YOR089C TOS3P43637 560 aa3.92□□□□□ -1.78
VPS21YOR089C SFH5P47008 294 aa3.92□□□□□ -1.78
VPS21YOR089C RET3P53600 189 aa3.92□□□□□ -1.78
VPS21YOR089C ALF1P53904 254 aa3.92□□□□□ -1.78
VPS21YOR089C SPR6Q01684 191 aa3.92□□□□□ -1.78
VPS21YOR089C ERP1Q05359 219 aaKnown RBP3.92□□□□□ -1.78
VPS21YOR089C HCR1Q05775 265 aaKnown RBP3.92□□□□□ -1.78
VPS21YOR089C YLR297WQ05899 129 aa3.92□□□□□ -1.78
VPS21YOR089C ARR1Q06596 294 aa3.92□□□□□ -1.78
VPS21YOR089C SWI1P09547 1314 aa3.92□□□□□ -1.78
VPS21YOR089C OPI3P05375 206 aa3.91□□□□□ -1.78
VPS21YOR089C RNA1P11745 407 aaKnown RBP3.91□□□□□ -1.78
VPS21YOR089C MAS2P11914 482 aa3.91□□□□□ -1.78
VPS21YOR089C CLN3P13365 580 aa3.91□□□□□ -1.78
VPS21YOR089C PUT3P25502 979 aaPredicted RBP3.91□□□□□ -1.78
VPS21YOR089C VPS45P38932 577 aa3.91□□□□□ -1.78
VPS21YOR089C MNN9P39107 395 aaKnown RBP3.91□□□□□ -1.78
VPS21YOR089C LYS12P40495 371 aaKnown RBP3.91□□□□□ -1.78
VPS21YOR089C TES1P41903 349 aaKnown RBP3.91□□□□□ -1.78
VPS21YOR089C YFR018CP43599 363 aa3.91□□□□□ -1.78
VPS21YOR089C YGR117CP53270 476 aa3.91□□□□□ -1.78
VPS21YOR089C ASA1Q06822 443 aa3.91□□□□□ -1.78
VPS21YOR089C YOL075CQ08234 1294 aa3.91□□□□□ -1.78
VPS21YOR089C SRL1Q08673 210 aa3.91□□□□□ -1.78
VPS21YOR089C SET6Q12529 373 aa3.91□□□□□ -1.78
VPS21YOR089C RGS2Q99188 309 aa3.91□□□□□ -1.78
VPS21YOR089C HEM2P05373 342 aa3.9□□□□□ -1.79
VPS21YOR089C GAL3P13045 520 aa3.9□□□□□ -1.79
VPS21YOR089C HXT2P23585 541 aa3.9□□□□□ -1.79
VPS21YOR089C IME2P32581 645 aa3.9□□□□□ -1.79
VPS21YOR089C PTK1P36002 662 aaPredicted RBP3.9□□□□□ -1.79
VPS21YOR089C MTC4P38335 694 aaKnown RBP3.9□□□□□ -1.79
VPS21YOR089C YHR177WP38867 453 aa3.9□□□□□ -1.79
VPS21YOR089C END3P39013 349 aa3.9□□□□□ -1.79
VPS21YOR089C FAA2P39518 744 aa3.9□□□□□ -1.79
VPS21YOR089C YJL070CP40361 888 aa3.9□□□□□ -1.79
VPS21YOR089C RRT5P43607 289 aa3.9□□□□□ -1.79
VPS21YOR089C AZR1P50080 613 aa3.9□□□□□ -1.79
VPS21YOR089C ARK1P53974 638 aa3.9□□□□□ -1.79
VPS21YOR089C YPL068CQ02749 293 aa3.9□□□□□ -1.79
VPS21YOR089C MSC3Q05812 728 aa3.9□□□□□ -1.79
VPS21YOR089C GRS2Q06817 618 aa3.9□□□□□ -1.79
VPS21YOR089C YOP1Q12402 180 aa3.9□□□□□ -1.79
VPS21YOR089C RRP12Q12754 1228 aaKnown RBP3.9□□□□□ -1.79
VPS21YOR089C FSH3Q99369 266 aa3.9□□□□□ -1.79
VPS21YOR089C PAB1P04147 577 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
VPS21YOR089C GAL7P08431 366 aa3.89□□□□□ -1.79
VPS21YOR089C YLL053CP0CD98 152 aa3.89□□□□□ -1.79
VPS21YOR089C PUT4P15380 627 aa3.89□□□□□ -1.79
VPS21YOR089C SLY1P22213 666 aa3.89□□□□□ -1.79
VPS21YOR089C YCR043CP25361 127 aa3.89□□□□□ -1.79
VPS21YOR089C YCL068CP25593 260 aa3.89□□□□□ -1.79
VPS21YOR089C YEF1P32622 495 aa3.89□□□□□ -1.79
VPS21YOR089C LOS1P33418 1100 aaPredicted RBP3.89□□□□□ -1.79
VPS21YOR089C NAT2P37293 288 aa3.89□□□□□ -1.79
VPS21YOR089C YHR122WP38829 231 aa3.89□□□□□ -1.79
VPS21YOR089C ALP1P38971 573 aa3.89□□□□□ -1.79
VPS21YOR089C PRP39P39682 629 aaKnown RBP3.89□□□□□ -1.79
VPS21YOR089C YMR134WP40207 237 aa3.89□□□□□ -1.79
VPS21YOR089C SEC9P40357 651 aa3.89□□□□□ -1.79
VPS21YOR089C PMT5P52867 743 aa3.89□□□□□ -1.79
VPS21YOR089C CCE1Q03702 353 aa3.89□□□□□ -1.79
VPS21YOR089C BCH1Q05029 724 aa3.89□□□□□ -1.79
VPS21YOR089C NKP2Q06162 153 aa3.89□□□□□ -1.79
VPS21YOR089C RAX1Q08760 435 aa3.89□□□□□ -1.79
VPS21YOR089C SNX3Q08826 162 aaKnown RBP3.89□□□□□ -1.79
VPS21YOR089C RAD50P12753 1312 aa3.89□□□□□ -1.79
VPS21YOR089C POM152P39685 1337 aa3.89□□□□□ -1.79
VPS21YOR089C RIM15P43565 1770 aa3.89□□□□□ -1.79
VPS21YOR089C VPS63O13549 108 aa3.88□□□□□ -1.79
VPS21YOR089C OM45P16547 393 aa3.88□□□□□ -1.79
VPS21YOR089C DBP3P20447 523 aaKnown RBP3.88□□□□□ -1.79
VPS21YOR089C SAR1P20606 190 aaKnown RBP3.88□□□□□ -1.79
VPS21YOR089C YCR022CP25620 114 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms