RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C RPS5P26783 225 aaKnown RBP2.43□□□□□ -2.02
DNL4YOR005C CTS1P29029 562 aa2.43□□□□□ -2.02
DNL4YOR005C REC114P32841 428 aa2.43□□□□□ -2.02
DNL4YOR005C TPO5P36029 618 aa2.43□□□□□ -2.02
DNL4YOR005C ROT2P38138 954 aa2.43□□□□□ -2.02
DNL4YOR005C SWC5P38326 303 aa2.43□□□□□ -2.02
DNL4YOR005C LAG1P38703 411 aa2.43□□□□□ -2.02
DNL4YOR005C STP2P38704 541 aa2.43□□□□□ -2.02
DNL4YOR005C INM1P38710 295 aa2.43□□□□□ -2.02
DNL4YOR005C ARN1P38731 627 aa2.43□□□□□ -2.02
DNL4YOR005C YHR177WP38867 453 aa2.43□□□□□ -2.02
DNL4YOR005C HXT9P40885 567 aa2.43□□□□□ -2.02
DNL4YOR005C POP1P41812 875 aa2.43□□□□□ -2.02
DNL4YOR005C SPG5P42933 373 aa2.43□□□□□ -2.02
DNL4YOR005C SAD1P43589 448 aa2.43□□□□□ -2.02
DNL4YOR005C GTO1P48239 356 aa2.43□□□□□ -2.02
DNL4YOR005C RIB4P50861 169 aaPredicted RBP2.43□□□□□ -2.02
DNL4YOR005C RTT102P53330 157 aa2.43□□□□□ -2.02
DNL4YOR005C RCF2P53721 224 aa2.43□□□□□ -2.02
DNL4YOR005C DBP6P53734 629 aaKnown RBP2.43□□□□□ -2.02
DNL4YOR005C SLT2Q00772 484 aa2.43□□□□□ -2.02
DNL4YOR005C KIN4Q01919 800 aa2.43□□□□□ -2.02
DNL4YOR005C GEP3Q08622 556 aa2.43□□□□□ -2.02
DNL4YOR005C HRT3Q12347 344 aa2.43□□□□□ -2.02
DNL4YOR005C STE2D6VTK4 431 aa2.43□□□□□ -2.02
DNL4YOR005C YPT1P01123 206 aaKnown RBP2.43□□□□□ -2.02
DNL4YOR005C RPS3P05750 240 aaKnown RBP2.43□□□□□ -2.02
DNL4YOR005C CDC33P07260 213 aaKnown RBP2.43□□□□□ -2.02
DNL4YOR005C CHS1P08004 1131 aa2.43□□□□□ -2.02
DNL4YOR005C UNG1P12887 359 aa2.43□□□□□ -2.02
DNL4YOR005C GCN3P14741 305 aa2.43□□□□□ -2.02
DNL4YOR005C MSS116P15424 664 aaKnown RBP2.43□□□□□ -2.02
DNL4YOR005C YCL068CP25593 260 aa2.43□□□□□ -2.02
DNL4YOR005C ITR2P30606 609 aa2.43□□□□□ -2.02
DNL4YOR005C NTG1P31378 399 aa2.43□□□□□ -2.02
DNL4YOR005C TPS2P31688 896 aaKnown RBP2.43□□□□□ -2.02
DNL4YOR005C MSS51P32335 436 aa2.43□□□□□ -2.02
DNL4YOR005C HMX1P32339 317 aa2.43□□□□□ -2.02
DNL4YOR005C PHO90P39535 881 aa2.43□□□□□ -2.02
DNL4YOR005C UBP8P50102 471 aa2.43□□□□□ -2.02
DNL4YOR005C MND1P53102 219 aa2.43□□□□□ -2.02
DNL4YOR005C PKP2P53170 491 aa2.43□□□□□ -2.02
DNL4YOR005C TAF12Q03761 539 aa2.43□□□□□ -2.02
DNL4YOR005C CAB5Q03941 241 aa2.43□□□□□ -2.02
DNL4YOR005C ARV1Q06541 321 aa2.43□□□□□ -2.02
DNL4YOR005C YLR053CQ12026 108 aa2.43□□□□□ -2.02
DNL4YOR005C TY3A-GQ12173 290 aa2.43□□□□□ -2.02
DNL4YOR005C RDL1Q12305 139 aaKnown RBP2.43□□□□□ -2.02
DNL4YOR005C RNH203Q12338 110 aa2.43□□□□□ -2.02
DNL4YOR005C RMD5Q12508 421 aa2.43□□□□□ -2.02
DNL4YOR005C TY3A-IQ99219 290 aa2.43□□□□□ -2.02
DNL4YOR005C PAB1P04147 577 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
DNL4YOR005C CMD1P06787 147 aaKnown RBP2.42□□□□□ -2.02
DNL4YOR005C SSA3P09435 649 aaKnown RBP2.42□□□□□ -2.02
DNL4YOR005C KSS1P14681 368 aa2.42□□□□□ -2.02
DNL4YOR005C HXT2P23585 541 aa2.42□□□□□ -2.02
DNL4YOR005C SAT4P25333 603 aaKnown RBP2.42□□□□□ -2.02
DNL4YOR005C YMC1P32331 307 aa2.42□□□□□ -2.02
DNL4YOR005C RGT1P32862 1170 aa2.42□□□□□ -2.02
DNL4YOR005C MRPL37P36532 105 aa2.42□□□□□ -2.02
DNL4YOR005C TRM5P38793 499 aa2.42□□□□□ -2.02
DNL4YOR005C MAM33P40513 266 aa2.42□□□□□ -2.02
DNL4YOR005C SNL1P40548 159 aa2.42□□□□□ -2.02
DNL4YOR005C CDC40P40968 455 aaPredicted RBP2.42□□□□□ -2.02
DNL4YOR005C EMC2P47133 292 aaKnown RBP2.42□□□□□ -2.02
DNL4YOR005C YGL185CP53100 379 aa2.42□□□□□ -2.02
DNL4YOR005C MRM2P53123 320 aa2.42□□□□□ -2.02
DNL4YOR005C SWP1Q02795 286 aa2.42□□□□□ -2.02
DNL4YOR005C YMR206WQ03695 313 aa2.42□□□□□ -2.02
DNL4YOR005C YML108WQ03759 105 aa2.42□□□□□ -2.02
DNL4YOR005C NUP53Q03790 475 aa2.42□□□□□ -2.02
DNL4YOR005C YMR310CQ04867 317 aaPredicted RBP2.42□□□□□ -2.02
DNL4YOR005C RRG8Q06109 277 aa2.42□□□□□ -2.02
DNL4YOR005C PEX27Q08580 376 aa2.42□□□□□ -2.02
DNL4YOR005C GLE1Q12315 538 aa2.42□□□□□ -2.02
DNL4YOR005C MES1P00958 751 aaKnown RBP2.42□□□□□ -2.02
DNL4YOR005C REP1P03871 373 aa2.42□□□□□ -2.02
DNL4YOR005C SSC1P0CS90 654 aaKnown RBP2.42□□□□□ -2.02
DNL4YOR005C MAS1P10507 462 aa2.42□□□□□ -2.02
DNL4YOR005C BAR1P12630 587 aa2.42□□□□□ -2.02
DNL4YOR005C FAR1P21268 830 aa2.42□□□□□ -2.02
DNL4YOR005C MEK1P24719 497 aaPredicted RBP2.42□□□□□ -2.02
DNL4YOR005C RPS2P25443 254 aaKnown RBP2.42□□□□□ -2.02
DNL4YOR005C DMC1P25453 334 aa2.42□□□□□ -2.02
DNL4YOR005C ZIP1P31111 875 aa2.42□□□□□ -2.02
DNL4YOR005C COT1P32798 439 aa2.42□□□□□ -2.02
DNL4YOR005C ATO2P32907 282 aa2.42□□□□□ -2.02
DNL4YOR005C SIP2P34164 415 aaKnown RBP2.42□□□□□ -2.02
DNL4YOR005C GOS1P38736 223 aa2.42□□□□□ -2.02
DNL4YOR005C SMF2P38778 549 aa2.42□□□□□ -2.02
DNL4YOR005C ALP1P38971 573 aa2.42□□□□□ -2.02
DNL4YOR005C YAL037WP39728 267 aa2.42□□□□□ -2.02
DNL4YOR005C SCC4P40090 624 aa2.42□□□□□ -2.02
DNL4YOR005C ATM1P40416 690 aa2.42□□□□□ -2.02
DNL4YOR005C YJL043WP47053 257 aa2.42□□□□□ -2.02
DNL4YOR005C YJR054WP47114 497 aa2.42□□□□□ -2.02
DNL4YOR005C TRF5P48561 642 aaKnown RBP2.42□□□□□ -2.02
DNL4YOR005C YGL114WP53134 725 aa2.42□□□□□ -2.02
DNL4YOR005C SOL4P53315 255 aa2.42□□□□□ -2.02
DNL4YOR005C PGA2P53903 129 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 649.4 ms