RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A ATG10Q07879 167 aa3.15□□□□□ -1.91
YSF3YNL138W-A YER078W-AQ3E7A2 54 aa3.15□□□□□ -1.91
YSF3YNL138W-A YAR066WP0CX18 203 aa3.14□□□□□ -1.91
YSF3YNL138W-A YHR214WP0CX19 203 aa3.14□□□□□ -1.91
YSF3YNL138W-A CBS2P14905 389 aa3.14□□□□□ -1.91
YSF3YNL138W-A POL30P15873 258 aaKnown RBP3.14□□□□□ -1.91
YSF3YNL138W-A TPM1P17536 199 aaKnown RBP3.14□□□□□ -1.91
YSF3YNL138W-A PPH21P23594 369 aa3.14□□□□□ -1.91
YSF3YNL138W-A RRT12P25381 491 aa3.14□□□□□ -1.91
YSF3YNL138W-A EFB1P32471 206 aaKnown RBP3.14□□□□□ -1.91
YSF3YNL138W-A PRP21P32524 280 aaPredicted RBP3.14□□□□□ -1.91
YSF3YNL138W-A TIM17P39515 158 aa3.14□□□□□ -1.91
YSF3YNL138W-A RSM25P40496 264 aa3.14□□□□□ -1.91
YSF3YNL138W-A DLD2P46681 530 aaKnown RBP3.14□□□□□ -1.91
YSF3YNL138W-A OGG1P53397 376 aaPredicted RBP3.14□□□□□ -1.91
YSF3YNL138W-A CAF40P53829 373 aa3.14□□□□□ -1.91
YSF3YNL138W-A PIR1Q03178 341 aa3.14□□□□□ -1.91
YSF3YNL138W-A GIR2Q03768 265 aaPredicted RBP3.14□□□□□ -1.91
YSF3YNL138W-A YLR046CQ12253 270 aa3.14□□□□□ -1.91
YSF3YNL138W-A HSP42Q12329 375 aa3.14□□□□□ -1.91
YSF3YNL138W-A NAT1P12945 854 aaKnown RBP3.13□□□□□ -1.91
YSF3YNL138W-A DAL81P21657 970 aa3.13□□□□□ -1.91
YSF3YNL138W-A GEX1P25596 615 aa3.13□□□□□ -1.91
YSF3YNL138W-A NRP1P32770 719 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
YSF3YNL138W-A REC114P32841 428 aa3.13□□□□□ -1.91
YSF3YNL138W-A YBP1P38315 674 aa3.13□□□□□ -1.91
YSF3YNL138W-A CTK3P46963 296 aaPredicted RBP3.13□□□□□ -1.91
YSF3YNL138W-A PRP24P49960 444 aaKnown RBP3.13□□□□□ -1.91
YSF3YNL138W-A PEX25Q02969 394 aa3.13□□□□□ -1.91
YSF3YNL138W-A ODC1Q03028 310 aa3.13□□□□□ -1.91
YSF3YNL138W-A YDR387CQ04162 555 aa3.13□□□□□ -1.91
YSF3YNL138W-A ABP140Q08641 628 aaKnown RBP3.13□□□□□ -1.91
YSF3YNL138W-A RSA1Q08932 381 aa3.13□□□□□ -1.91
YSF3YNL138W-A THP3Q12049 470 aaKnown RBP3.13□□□□□ -1.91
YSF3YNL138W-A GPH1P06738 902 aaKnown RBP3.12□□□□□ -1.91
YSF3YNL138W-A SSA3P09435 649 aaKnown RBP3.12□□□□□ -1.91
YSF3YNL138W-A CKA2P19454 339 aa3.12□□□□□ -1.91
YSF3YNL138W-A ISY1P21374 235 aaPredicted RBP3.12□□□□□ -1.91
YSF3YNL138W-A CLB3P24870 427 aa3.12□□□□□ -1.91
YSF3YNL138W-A SIN4P32259 974 aa3.12□□□□□ -1.91
YSF3YNL138W-A GYP6P32806 458 aa3.12□□□□□ -1.91
YSF3YNL138W-A NPL6P32832 435 aa3.12□□□□□ -1.91
YSF3YNL138W-A YOX1P34161 385 aa3.12□□□□□ -1.91
YSF3YNL138W-A HCS1P34243 683 aa3.12□□□□□ -1.91
YSF3YNL138W-A TAF14P35189 244 aa3.12□□□□□ -1.91
YSF3YNL138W-A YBR139WP38109 508 aa3.12□□□□□ -1.91
YSF3YNL138W-A VHC1P38329 1120 aa3.12□□□□□ -1.91
YSF3YNL138W-A YIL067CP40514 678 aa3.12□□□□□ -1.91
YSF3YNL138W-A YJR079WP47126 109 aa3.12□□□□□ -1.91
YSF3YNL138W-A YIP1P53039 248 aa3.12□□□□□ -1.91
YSF3YNL138W-A YGR250CP53316 781 aaKnown RBP3.12□□□□□ -1.91
YSF3YNL138W-A PRM1P53835 661 aa3.12□□□□□ -1.91
YSF3YNL138W-A GOR1P53839 350 aa3.12□□□□□ -1.91
YSF3YNL138W-A YIF1P53845 314 aaKnown RBP3.12□□□□□ -1.91
YSF3YNL138W-A DSL1P53847 754 aa3.12□□□□□ -1.91
YSF3YNL138W-A ARX1Q03862 593 aaKnown RBP3.12□□□□□ -1.91
YSF3YNL138W-A YPL199CQ08954 240 aa3.12□□□□□ -1.91
YSF3YNL138W-A ERP4Q12450 207 aa3.12□□□□□ -1.91
YSF3YNL138W-A HEM15P16622 393 aa3.11□□□□□ -1.91
YSF3YNL138W-A FUR1P18562 216 aaKnown RBP3.11□□□□□ -1.91
YSF3YNL138W-A CRM1P30822 1084 aaKnown RBP3.11□□□□□ -1.91
YSF3YNL138W-A APE2P32454 952 aaKnown RBP3.11□□□□□ -1.91
YSF3YNL138W-A ECM25P32525 599 aa3.11□□□□□ -1.91
YSF3YNL138W-A NAT2P37293 288 aa3.11□□□□□ -1.91
YSF3YNL138W-A OPY1P38271 328 aa3.11□□□□□ -1.91
YSF3YNL138W-A URA8P38627 578 aaPredicted RBP3.11□□□□□ -1.91
YSF3YNL138W-A CTM1P38818 585 aa3.11□□□□□ -1.91
YSF3YNL138W-A GPI16P38875 610 aa3.11□□□□□ -1.91
YSF3YNL138W-A LSM5P40089 93 aaKnown RBP3.11□□□□□ -1.91
YSF3YNL138W-A PHB1P40961 287 aa3.11□□□□□ -1.91
YSF3YNL138W-A SAS2P40963 338 aa3.11□□□□□ -1.91
YSF3YNL138W-A LCB2P40970 561 aa3.11□□□□□ -1.91
YSF3YNL138W-A YPI1P43587 155 aa3.11□□□□□ -1.91
YSF3YNL138W-A HSP31Q04432 237 aa3.11□□□□□ -1.91
YSF3YNL138W-A YPR022CQ12139 1133 aa3.11□□□□□ -1.91
YSF3YNL138W-A SCM3Q12334 223 aa3.11□□□□□ -1.91
YSF3YNL138W-A SFI1Q12369 946 aa3.11□□□□□ -1.91
YSF3YNL138W-A GIS3Q12418 502 aa3.11□□□□□ -1.91
YSF3YNL138W-A MATALPHA2P0CY08 210 aa3.1□□□□□ -1.91
YSF3YNL138W-A HMLALPHA2P0CY09 210 aa3.1□□□□□ -1.91
YSF3YNL138W-A ALG1P16661 449 aa3.1□□□□□ -1.91
YSF3YNL138W-A RPI1P23250 407 aaKnown RBP3.1□□□□□ -1.91
YSF3YNL138W-A MKK1P32490 508 aa3.1□□□□□ -1.91
YSF3YNL138W-A BYE1P36106 594 aa3.1□□□□□ -1.91
YSF3YNL138W-A OST1P41543 476 aaKnown RBP3.1□□□□□ -1.91
YSF3YNL138W-A ZIM17P42844 174 aa3.1□□□□□ -1.91
YSF3YNL138W-A YFL067WP43537 175 aa3.1□□□□□ -1.91
YSF3YNL138W-A YJR030CP47101 745 aa3.1□□□□□ -1.91
YSF3YNL138W-A NBP1P52919 319 aaPredicted RBP3.1□□□□□ -1.91
YSF3YNL138W-A EGD1Q02642 157 aaKnown RBP3.1□□□□□ -1.91
YSF3YNL138W-A YLR012CQ07927 99 aa3.1□□□□□ -1.91
YSF3YNL138W-A VPS54Q12071 889 aa3.1□□□□□ -1.91
YSF3YNL138W-A CYR1P08678 2026 aaKnown RBP3.09□□□□□ -1.91
YSF3YNL138W-A CDC42P19073 191 aa3.09□□□□□ -1.91
YSF3YNL138W-A SNT1P25357 1226 aa3.09□□□□□ -1.91
YSF3YNL138W-A ITR1P30605 584 aa3.09□□□□□ -1.91
YSF3YNL138W-A SWI3P32591 825 aa3.09□□□□□ -1.91
YSF3YNL138W-A NFU1P32860 256 aa3.09□□□□□ -1.91
YSF3YNL138W-A ARA1P38115 344 aa3.09□□□□□ -1.91
YSF3YNL138W-A RPS0BP46654 252 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms