RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C PRP46Q12417 451 aaPredicted RBP3.51□□□□□ -1.85
SSO2YMR183C HIS4P00815 799 aaKnown RBP3.5□□□□□ -1.85
SSO2YMR183C RAD7P06779 565 aa3.5□□□□□ -1.85
SSO2YMR183C GDH1P07262 454 aaKnown RBP3.5□□□□□ -1.85
SSO2YMR183C FUS3P16892 353 aaKnown RBP3.5□□□□□ -1.85
SSO2YMR183C RPB8P20436 146 aa3.5□□□□□ -1.85
SSO2YMR183C DAL81P21657 970 aa3.5□□□□□ -1.85
SSO2YMR183C RPL5P26321 297 aaKnown RBP3.5□□□□□ -1.85
SSO2YMR183C PRR1P28708 518 aa3.5□□□□□ -1.85
SSO2YMR183C RME1P32338 300 aaKnown RBP3.5□□□□□ -1.85
SSO2YMR183C MEI5P32489 222 aa3.5□□□□□ -1.85
SSO2YMR183C SRB4P32569 687 aa3.5□□□□□ -1.85
SSO2YMR183C SLX1P38324 304 aa3.5□□□□□ -1.85
SSO2YMR183C MMS21P38632 267 aa3.5□□□□□ -1.85
SSO2YMR183C YAL037WP39728 267 aa3.5□□□□□ -1.85
SSO2YMR183C LYS12P40495 371 aaKnown RBP3.5□□□□□ -1.85
SSO2YMR183C FMP33P46998 180 aa3.5□□□□□ -1.85
SSO2YMR183C YNL181WP53878 407 aa3.5□□□□□ -1.85
SSO2YMR183C KTR6P54070 446 aa3.5□□□□□ -1.85
SSO2YMR183C SNZ1Q03148 297 aa3.5□□□□□ -1.85
SSO2YMR183C MMT1Q03218 510 aa3.5□□□□□ -1.85
SSO2YMR183C RSN1Q03516 953 aa3.5□□□□□ -1.85
SSO2YMR183C URH1Q04179 340 aa3.5□□□□□ -1.85
SSO2YMR183C SNT309Q06091 175 aaPredicted RBP3.5□□□□□ -1.85
SSO2YMR183C ASA1Q06822 443 aa3.5□□□□□ -1.85
SSO2YMR183C REX4Q08237 289 aa3.5□□□□□ -1.85
SSO2YMR183C RRP12Q12754 1228 aaKnown RBP3.5□□□□□ -1.85
SSO2YMR183C BPT1P14772 1559 aa3.5□□□□□ -1.85
SSO2YMR183C RAD3P06839 778 aa3.49□□□□□ -1.85
SSO2YMR183C MSF1P08425 469 aa3.49□□□□□ -1.85
SSO2YMR183C ARF1P11076 181 aaKnown RBP3.49□□□□□ -1.85
SSO2YMR183C CKI1P20485 582 aa3.49□□□□□ -1.85
SSO2YMR183C YSR3P23501 404 aa3.49□□□□□ -1.85
SSO2YMR183C RVS161P25343 265 aaKnown RBP3.49□□□□□ -1.85
SSO2YMR183C PPZ1P26570 692 aa3.49□□□□□ -1.85
SSO2YMR183C CWP1P28319 239 aa3.49□□□□□ -1.85
SSO2YMR183C SKN1P33336 771 aa3.49□□□□□ -1.85
SSO2YMR183C DOA1P36037 715 aa3.49□□□□□ -1.85
SSO2YMR183C YBR056WP38081 501 aa3.49□□□□□ -1.85
SSO2YMR183C MAL32P38158 584 aa3.49□□□□□ -1.85
SSO2YMR183C LCP5P40079 357 aaPredicted RBP3.49□□□□□ -1.85
SSO2YMR183C SCD6P45978 349 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SSO2YMR183C HMS2P47175 358 aa3.49□□□□□ -1.85
SSO2YMR183C YGL260WP53056 76 aa3.49□□□□□ -1.85
SSO2YMR183C PKP2P53170 491 aa3.49□□□□□ -1.85
SSO2YMR183C PCP1P53259 346 aa3.49□□□□□ -1.85
SSO2YMR183C MAL12P53341 584 aa3.49□□□□□ -1.85
SSO2YMR183C GPI15P53961 229 aa3.49□□□□□ -1.85
SSO2YMR183C BNA7Q04066 261 aa3.49□□□□□ -1.85
SSO2YMR183C YMR317WQ04893 1140 aa3.49□□□□□ -1.85
SSO2YMR183C SSK1Q07084 712 aa3.49□□□□□ -1.85
SSO2YMR183C YDL218WQ07629 317 aa3.49□□□□□ -1.85
SSO2YMR183C YPR022CQ12139 1133 aa3.49□□□□□ -1.85
SSO2YMR183C ATG34Q12292 412 aa3.49□□□□□ -1.85
SSO2YMR183C UBA3Q99344 299 aa3.49□□□□□ -1.85
SSO2YMR183C ATG2P53855 1592 aa3.48□□□□□ -1.85
SSO2YMR183C TDH3P00359 332 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
SSO2YMR183C POL30P15873 258 aaKnown RBP3.48□□□□□ -1.85
SSO2YMR183C OSM1P21375 501 aaKnown RBP3.48□□□□□ -1.85
SSO2YMR183C MYO3P36006 1272 aa3.48□□□□□ -1.85
SSO2YMR183C FAU1P40099 211 aa3.48□□□□□ -1.85
SSO2YMR183C YMR134WP40207 237 aa3.48□□□□□ -1.85
SSO2YMR183C YRB2P40517 327 aa3.48□□□□□ -1.85
SSO2YMR183C YIR014WP40570 242 aa3.48□□□□□ -1.85
SSO2YMR183C HXT9P40885 567 aa3.48□□□□□ -1.85
SSO2YMR183C MRX5P47007 382 aa3.48□□□□□ -1.85
SSO2YMR183C GPI1P53306 609 aa3.48□□□□□ -1.85
SSO2YMR183C SOL4P53315 255 aa3.48□□□□□ -1.85
SSO2YMR183C HXT11P54862 567 aa3.48□□□□□ -1.85
SSO2YMR183C ARP10Q04549 284 aa3.48□□□□□ -1.85
SSO2YMR183C IVY1Q04934 453 aa3.48□□□□□ -1.85
SSO2YMR183C LDS2Q08218 356 aa3.48□□□□□ -1.85
SSO2YMR183C SLF1Q12034 447 aaKnown RBP3.48□□□□□ -1.85
SSO2YMR183C ATG31Q12421 196 aa3.48□□□□□ -1.85
SSO2YMR183C YOS9Q99220 542 aa3.48□□□□□ -1.85
SSO2YMR183C EDE1P34216 1381 aa3.48□□□□□ -1.85
SSO2YMR183C SUC2P00724 532 aa3.47□□□□□ -1.85
SSO2YMR183C TPK3P05986 398 aa3.47□□□□□ -1.85
SSO2YMR183C PHO2P07269 559 aa3.47□□□□□ -1.85
SSO2YMR183C RPS16AP0CX51 143 aaKnown RBP3.47□□□□□ -1.85
SSO2YMR183C RPS16BP0CX52 143 aaKnown RBP3.47□□□□□ -1.85
SSO2YMR183C MXR2P25566 168 aa3.47□□□□□ -1.85
SSO2YMR183C SNC1P31109 117 aa3.47□□□□□ -1.85
SSO2YMR183C GCG1P32656 232 aaKnown RBP3.47□□□□□ -1.85
SSO2YMR183C COX13P32799 129 aa3.47□□□□□ -1.85
SSO2YMR183C MNS1P32906 549 aa3.47□□□□□ -1.85
SSO2YMR183C YKL162CP36052 402 aa3.47□□□□□ -1.85
SSO2YMR183C ECM4P36156 370 aa3.47□□□□□ -1.85
SSO2YMR183C YPK3P38070 525 aa3.47□□□□□ -1.85
SSO2YMR183C SBE22P38814 852 aa3.47□□□□□ -1.85
SSO2YMR183C BTT1P40314 149 aaPredicted RBP3.47□□□□□ -1.85
SSO2YMR183C PHB2P50085 310 aa3.47□□□□□ -1.85
SSO2YMR183C KAP114P53067 1004 aa3.47□□□□□ -1.85
SSO2YMR183C RHO4Q00246 291 aa3.47□□□□□ -1.85
SSO2YMR183C PNG1Q02890 363 aa3.47□□□□□ -1.85
SSO2YMR183C RVB1Q03940 463 aaKnown RBP3.47□□□□□ -1.85
SSO2YMR183C MYO5Q04439 1219 aaKnown RBP3.47□□□□□ -1.85
SSO2YMR183C YTH1Q06102 208 aaPredicted RBP3.47□□□□□ -1.85
SSO2YMR183C CMS1Q07897 291 aaKnown RBP3.47□□□□□ -1.85
SSO2YMR183C SAM4Q08985 325 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms