RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C UTP6Q02354 440 aaKnown RBP2.9□□□□□ -1.95
SUB1YMR039C CCE1Q03702 353 aa2.9□□□□□ -1.95
SUB1YMR039C VHS1Q03785 461 aa2.9□□□□□ -1.95
SUB1YMR039C MDM36Q06820 579 aa2.9□□□□□ -1.95
SUB1YMR039C SFG1Q12507 346 aa2.9□□□□□ -1.95
SUB1YMR039C CBP2P03874 630 aaPredicted RBP2.89□□□□□ -1.95
SUB1YMR039C STE3P06783 470 aa2.89□□□□□ -1.95
SUB1YMR039C GRR1P24814 1151 aa2.89□□□□□ -1.95
SUB1YMR039C PET18P25362 215 aa2.89□□□□□ -1.95
SUB1YMR039C CYS4P32582 507 aaKnown RBP2.89□□□□□ -1.95
SUB1YMR039C RIB7P33312 244 aa2.89□□□□□ -1.95
SUB1YMR039C MNL1P38888 796 aa2.89□□□□□ -1.95
SUB1YMR039C VPS45P38932 577 aa2.89□□□□□ -1.95
SUB1YMR039C MRM2P53123 320 aa2.89□□□□□ -1.95
SUB1YMR039C MPS2P53159 387 aa2.89□□□□□ -1.95
SUB1YMR039C MST27P53176 234 aa2.89□□□□□ -1.95
SUB1YMR039C RTT102P53330 157 aa2.89□□□□□ -1.95
SUB1YMR039C ALF1P53904 254 aa2.89□□□□□ -1.95
SUB1YMR039C EGD1Q02642 157 aaKnown RBP2.89□□□□□ -1.95
SUB1YMR039C MMT1Q03218 510 aa2.89□□□□□ -1.95
SUB1YMR039C VPS20Q04272 221 aa2.89□□□□□ -1.95
SUB1YMR039C YMR111CQ04461 462 aaPredicted RBP2.89□□□□□ -1.95
SUB1YMR039C THR4P16120 514 aaKnown RBP2.88□□□□□ -1.95
SUB1YMR039C DBP3P20447 523 aaKnown RBP2.88□□□□□ -1.95
SUB1YMR039C PSO2P30620 661 aa2.88□□□□□ -1.95
SUB1YMR039C QDR3P38227 689 aa2.88□□□□□ -1.95
SUB1YMR039C LIN1P38852 340 aaPredicted RBP2.88□□□□□ -1.95
SUB1YMR039C SEO1P39709 593 aa2.88□□□□□ -1.95
SUB1YMR039C SSO2P39926 295 aa2.88□□□□□ -1.95
SUB1YMR039C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SUB1YMR039C STD1Q02794 444 aa2.88□□□□□ -1.95
SUB1YMR039C RTN1Q04947 295 aaKnown RBP2.88□□□□□ -1.95
SUB1YMR039C MSC3Q05812 728 aa2.88□□□□□ -1.95
SUB1YMR039C RRP36Q12481 300 aaPredicted RBP2.88□□□□□ -1.95
SUB1YMR039C PSK1P31374 1356 aa2.87□□□□□ -1.95
SUB1YMR039C CDC37P06101 506 aaKnown RBP2.87□□□□□ -1.95
SUB1YMR039C DST1P07273 309 aa2.87□□□□□ -1.95
SUB1YMR039C RNR2P09938 399 aaKnown RBP2.87□□□□□ -1.95
SUB1YMR039C IMA3P0CW40 589 aa2.87□□□□□ -1.95
SUB1YMR039C IMA4P0CW41 589 aa2.87□□□□□ -1.95
SUB1YMR039C PUT4P15380 627 aa2.87□□□□□ -1.95
SUB1YMR039C OM45P16547 393 aa2.87□□□□□ -1.95
SUB1YMR039C HMX1P32339 317 aa2.87□□□□□ -1.95
SUB1YMR039C YSC83P32792 385 aa2.87□□□□□ -1.95
SUB1YMR039C MRPS9P38120 278 aa2.87□□□□□ -1.95
SUB1YMR039C BAT1P38891 393 aaKnown RBP2.87□□□□□ -1.95
SUB1YMR039C OXA1P39952 402 aa2.87□□□□□ -1.95
SUB1YMR039C YER079WP40052 210 aaKnown RBP2.87□□□□□ -1.95
SUB1YMR039C YER186CP40101 306 aa2.87□□□□□ -1.95
SUB1YMR039C LOC1P43586 204 aaPredicted RBP2.87□□□□□ -1.95
SUB1YMR039C BNS1P50084 137 aa2.87□□□□□ -1.95
SUB1YMR039C RRP46P53256 223 aaPredicted RBP2.87□□□□□ -1.95
SUB1YMR039C LIP2Q06005 328 aa2.87□□□□□ -1.95
SUB1YMR039C IMA2Q08295 589 aa2.87□□□□□ -1.95
SUB1YMR039C PEX27Q08580 376 aa2.87□□□□□ -1.95
SUB1YMR039C YPQ1Q12010 308 aa2.87□□□□□ -1.95
SUB1YMR039C PFK27Q12471 397 aaPredicted RBP2.87□□□□□ -1.95
SUB1YMR039C MAS1P10507 462 aa2.86□□□□□ -1.95
SUB1YMR039C SLM5P25345 492 aaKnown RBP2.86□□□□□ -1.95
SUB1YMR039C SPP381P38282 291 aaPredicted RBP2.86□□□□□ -1.95
SUB1YMR039C OM14P38325 134 aa2.86□□□□□ -1.95
SUB1YMR039C MNN9P39107 395 aaKnown RBP2.86□□□□□ -1.95
SUB1YMR039C MMF1P40185 145 aaKnown RBP2.86□□□□□ -1.95
SUB1YMR039C SIM1P40472 476 aa2.86□□□□□ -1.95
SUB1YMR039C MAM33P40513 266 aa2.86□□□□□ -1.95
SUB1YMR039C HAC1P41546 238 aa2.86□□□□□ -1.95
SUB1YMR039C YMR102CQ03177 834 aa2.86□□□□□ -1.95
SUB1YMR039C YET2Q04210 160 aa2.86□□□□□ -1.95
SUB1YMR039C URC2Q04411 772 aa2.86□□□□□ -1.95
SUB1YMR039C YMR310CQ04867 317 aaPredicted RBP2.86□□□□□ -1.95
SUB1YMR039C SNT309Q06091 175 aaPredicted RBP2.86□□□□□ -1.95
SUB1YMR039C YLH47Q06493 454 aa2.86□□□□□ -1.95
SUB1YMR039C DNL4Q08387 944 aaPredicted RBP2.86□□□□□ -1.95
SUB1YMR039C NCA2Q12374 616 aa2.86□□□□□ -1.95
SUB1YMR039C CEX1Q12453 761 aa2.86□□□□□ -1.95
SUB1YMR039C COX4P04037 155 aa2.85□□□□□ -1.95
SUB1YMR039C RPL12AP0CX53 165 aaKnown RBP2.85□□□□□ -1.95
SUB1YMR039C RPL12BP0CX54 165 aa2.85□□□□□ -1.95
SUB1YMR039C SAG1P20840 650 aa2.85□□□□□ -1.95
SUB1YMR039C PPQ1P32945 549 aa2.85□□□□□ -1.95
SUB1YMR039C PTI1P39927 425 aaPredicted RBP2.85□□□□□ -1.95
SUB1YMR039C YFR018CP43599 363 aa2.85□□□□□ -1.95
SUB1YMR039C ATG18P43601 500 aa2.85□□□□□ -1.95
SUB1YMR039C TOS3P43637 560 aa2.85□□□□□ -1.95
SUB1YMR039C AIM24P47127 394 aa2.85□□□□□ -1.95
SUB1YMR039C CRH1P53301 507 aa2.85□□□□□ -1.95
SUB1YMR039C MRPS16Q02608 121 aa2.85□□□□□ -1.95
SUB1YMR039C ECM11Q04110 302 aa2.85□□□□□ -1.95
SUB1YMR039C YLR297WQ05899 129 aa2.85□□□□□ -1.95
SUB1YMR039C YPR078CQ06813 372 aa2.85□□□□□ -1.95
SUB1YMR039C SMC5Q08204 1093 aa2.85□□□□□ -1.95
SUB1YMR039C RNH203Q12338 110 aa2.85□□□□□ -1.95
SUB1YMR039C ATP1P07251 545 aaKnown RBP2.84□□□□□ -1.95
SUB1YMR039C PRB1P09232 635 aa2.84□□□□□ -1.95
SUB1YMR039C ARF1P11076 181 aaKnown RBP2.84□□□□□ -1.95
SUB1YMR039C CAP2P13517 287 aa2.84□□□□□ -1.95
SUB1YMR039C EXG1P23776 448 aaKnown RBP2.84□□□□□ -1.95
SUB1YMR039C CDC50P25656 391 aa2.84□□□□□ -1.95
SUB1YMR039C MSK1P32048 576 aa2.84□□□□□ -1.95
SUB1YMR039C DPH5P32469 300 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms