RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W YER184CP39961 794 aa2.14□□□□□ -2.07
BER1YLR412W ABM1P47146 123 aa2.14□□□□□ -2.07
BER1YLR412W REX2P54964 269 aaKnown RBP2.14□□□□□ -2.07
BER1YLR412W PRP3Q03338 469 aaPredicted RBP2.14□□□□□ -2.07
BER1YLR412W ASA1Q06822 443 aa2.14□□□□□ -2.07
BER1YLR412W GPM3Q12326 303 aa2.14□□□□□ -2.07
BER1YLR412W PRM7Q12459 698 aa2.14□□□□□ -2.07
BER1YLR412W PUT4P15380 627 aa2.13□□□□□ -2.07
BER1YLR412W TOA2P32774 122 aa2.13□□□□□ -2.07
BER1YLR412W SOL2P37262 315 aa2.13□□□□□ -2.07
BER1YLR412W LSM12P38828 187 aaKnown RBP2.13□□□□□ -2.07
BER1YLR412W WSS1P38838 269 aa2.13□□□□□ -2.07
BER1YLR412W KEG1P43614 200 aa2.13□□□□□ -2.07
BER1YLR412W VHT1P53241 593 aa2.13□□□□□ -2.07
BER1YLR412W URC2Q04411 772 aa2.13□□□□□ -2.07
BER1YLR412W MSC3Q05812 728 aa2.13□□□□□ -2.07
BER1YLR412W RPS18AP0CX55 146 aaKnown RBP2.12□□□□□ -2.07
BER1YLR412W RPS18BP0CX56 146 aaPredicted RBP2.12□□□□□ -2.07
BER1YLR412W FMT1P32785 401 aa2.12□□□□□ -2.07
BER1YLR412W PDC2P32896 925 aa2.12□□□□□ -2.07
BER1YLR412W LTV1P34078 463 aa2.12□□□□□ -2.07
BER1YLR412W BMT2P38278 337 aa2.12□□□□□ -2.07
BER1YLR412W PEX22P39718 180 aa2.12□□□□□ -2.07
BER1YLR412W HEM14P40012 539 aa2.12□□□□□ -2.07
BER1YLR412W PAC11P40960 533 aa2.12□□□□□ -2.07
BER1YLR412W TRF5P48561 642 aaKnown RBP2.12□□□□□ -2.07
BER1YLR412W SEH1P53011 349 aaKnown RBP2.12□□□□□ -2.07
BER1YLR412W HST1P53685 503 aa2.12□□□□□ -2.07
BER1YLR412W PRP38Q00723 242 aaPredicted RBP2.12□□□□□ -2.07
BER1YLR412W YDR115WQ04598 105 aa2.12□□□□□ -2.07
BER1YLR412W YLR177WQ06251 628 aa2.12□□□□□ -2.07
BER1YLR412W MEX67Q99257 599 aaKnown RBP2.12□□□□□ -2.07
BER1YLR412W TPI1P00942 248 aaKnown RBP2.11□□□□□ -2.07
BER1YLR412W CHA1P25379 360 aaKnown RBP2.11□□□□□ -2.07
BER1YLR412W CHL4P38907 458 aa2.11□□□□□ -2.07
BER1YLR412W PFS2P42841 465 aaKnown RBP2.11□□□□□ -2.07
BER1YLR412W CIN2P46670 268 aa2.11□□□□□ -2.07
BER1YLR412W LDS2Q08218 356 aa2.11□□□□□ -2.07
BER1YLR412W TIR4Q12218 487 aaPredicted RBP2.11□□□□□ -2.07
BER1YLR412W YPS3Q12303 508 aa2.11□□□□□ -2.07
BER1YLR412W HMS1Q12398 434 aa2.11□□□□□ -2.07
BER1YLR412W SEC27P41811 889 aaKnown RBP2.1□□□□□ -2.07
BER1YLR412W RTT102P53330 157 aa2.1□□□□□ -2.07
BER1YLR412W VAC7P53950 1165 aa2.1□□□□□ -2.07
BER1YLR412W MEH1Q02205 184 aa2.1□□□□□ -2.07
BER1YLR412W ERO1Q03103 563 aa2.1□□□□□ -2.07
BER1YLR412W YMR010WQ03687 405 aa2.1□□□□□ -2.07
BER1YLR412W ASP3-2P0CX77 362 aa2.09□□□□□ -2.07
BER1YLR412W ASP3-3P0CX78 362 aa2.09□□□□□ -2.07
BER1YLR412W ASP3-4P0CX79 362 aa2.09□□□□□ -2.07
BER1YLR412W ASP3-1P0CZ17 362 aa2.09□□□□□ -2.07
BER1YLR412W MAS2P11914 482 aa2.09□□□□□ -2.07
BER1YLR412W ANP1P32629 500 aa2.09□□□□□ -2.07
BER1YLR412W TOA1P32773 286 aa2.09□□□□□ -2.07
BER1YLR412W VEL1P53058 206 aa2.09□□□□□ -2.07
BER1YLR412W YDR541CQ03049 344 aa2.09□□□□□ -2.07
BER1YLR412W GYL1Q04322 720 aa2.09□□□□□ -2.07
BER1YLR412W NDL1Q06568 189 aa2.09□□□□□ -2.07
BER1YLR412W YOR376WQ08900 122 aa2.09□□□□□ -2.07
BER1YLR412W RFM1Q12192 310 aa2.09□□□□□ -2.07
BER1YLR412W SMC6Q12749 1114 aa2.09□□□□□ -2.07
BER1YLR412W RPS19AP07280 144 aaKnown RBP2.08□□□□□ -2.08
BER1YLR412W RPS19BP07281 144 aaPredicted RBP2.08□□□□□ -2.08
BER1YLR412W RNA1P11745 407 aaKnown RBP2.08□□□□□ -2.08
BER1YLR412W MSP1P28737 362 aa2.08□□□□□ -2.08
BER1YLR412W SMP1P38128 452 aa2.08□□□□□ -2.08
BER1YLR412W MNL1P38888 796 aa2.08□□□□□ -2.08
BER1YLR412W FHL1P39521 936 aa2.08□□□□□ -2.08
BER1YLR412W BUD27P43573 796 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
BER1YLR412W CTK3P46963 296 aaPredicted RBP2.08□□□□□ -2.08
BER1YLR412W YGR067CP53243 804 aa2.08□□□□□ -2.08
BER1YLR412W GAT3Q07928 141 aa2.08□□□□□ -2.08
BER1YLR412W SLF1Q12034 447 aaKnown RBP2.08□□□□□ -2.08
BER1YLR412W SRO7Q12038 1033 aa2.08□□□□□ -2.08
BER1YLR412W SPE3Q12074 293 aaKnown RBP2.08□□□□□ -2.08
BER1YLR412W YDR061WQ12298 539 aa2.08□□□□□ -2.08
BER1YLR412W SFM1Q12314 213 aa2.08□□□□□ -2.08
BER1YLR412W BI3Q9ZZW7 517 aa2.08□□□□□ -2.08
BER1YLR412W TPS2P31688 896 aaKnown RBP2.07□□□□□ -2.08
BER1YLR412W YBR241CP38142 488 aa2.07□□□□□ -2.08
BER1YLR412W KAP104P38217 918 aaKnown RBP2.07□□□□□ -2.08
BER1YLR412W SRP72P38688 640 aaKnown RBP2.07□□□□□ -2.08
BER1YLR412W FSH2Q05015 223 aa2.07□□□□□ -2.08
BER1YLR412W NOP6Q07623 225 aaKnown RBP2.07□□□□□ -2.08
BER1YLR412W AAD15Q08361 143 aa2.07□□□□□ -2.08
BER1YLR412W ATP16Q12165 160 aa2.07□□□□□ -2.08
BER1YLR412W HEM4P06174 275 aa2.06□□□□□ -2.08
BER1YLR412W RPL1AP0CX43 217 aaKnown RBP2.06□□□□□ -2.08
BER1YLR412W RPL1BP0CX44 217 aaKnown RBP2.06□□□□□ -2.08
BER1YLR412W RPL16AP26784 199 aaKnown RBP2.06□□□□□ -2.08
BER1YLR412W LDS1P31379 325 aa2.06□□□□□ -2.08
BER1YLR412W PRY2P36110 329 aa2.06□□□□□ -2.08
BER1YLR412W SPP381P38282 291 aaPredicted RBP2.06□□□□□ -2.08
BER1YLR412W ECM34P38728 170 aa2.06□□□□□ -2.08
BER1YLR412W YHR177WP38867 453 aa2.06□□□□□ -2.08
BER1YLR412W CIK1Q01649 594 aa2.06□□□□□ -2.08
BER1YLR412W YDL109CQ12103 647 aa2.06□□□□□ -2.08
BER1YLR412W RPN5Q12250 445 aaKnown RBP2.06□□□□□ -2.08
BER1YLR412W UNG1P12887 359 aa2.05□□□□□ -2.08
BER1YLR412W EPT1P22140 391 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms