RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C TAD2P47058 250 aa6.96□□□□□ -1.29
AFG2YLR397C MRPS17Q03246 237 aaPredicted RBP6.96□□□□□ -1.29
AFG2YLR397C SKY1Q03656 742 aa6.96□□□□□ -1.29
AFG2YLR397C YAP6Q03935 383 aa6.96□□□□□ -1.29
AFG2YLR397C LRS4Q04087 347 aaKnown RBP6.96□□□□□ -1.29
AFG2YLR397C SWC7Q06707 132 aa6.96□□□□□ -1.29
AFG2YLR397C VMA9Q3E7B6 73 aa6.96□□□□□ -1.29
AFG2YLR397C ART10P18634 518 aaKnown RBP6.96□□□□□ -1.3
AFG2YLR397C ZRC1P20107 442 aa6.96□□□□□ -1.3
AFG2YLR397C SDH2P21801 266 aa6.96□□□□□ -1.3
AFG2YLR397C MAG1P22134 296 aaKnown RBP6.96□□□□□ -1.3
AFG2YLR397C GID7P25569 745 aa6.96□□□□□ -1.3
AFG2YLR397C EMC1P25574 760 aa6.96□□□□□ -1.3
AFG2YLR397C CDC50P25656 391 aa6.96□□□□□ -1.3
AFG2YLR397C COQ3P27680 312 aa6.96□□□□□ -1.3
AFG2YLR397C COG3P40094 801 aa6.96□□□□□ -1.3
AFG2YLR397C PRM2P40534 656 aa6.96□□□□□ -1.3
AFG2YLR397C YIL024CP40543 189 aa6.96□□□□□ -1.3
AFG2YLR397C YGR201CP42936 225 aa6.96□□□□□ -1.3
AFG2YLR397C YJR154WP47181 346 aa6.96□□□□□ -1.3
AFG2YLR397C CCC1P47818 322 aa6.96□□□□□ -1.3
AFG2YLR397C SLX9P53251 210 aaPredicted RBP6.96□□□□□ -1.3
AFG2YLR397C KIN4Q01919 800 aa6.96□□□□□ -1.3
AFG2YLR397C YPL067CQ02754 198 aa6.96□□□□□ -1.3
AFG2YLR397C GMC1Q04399 608 aa6.96□□□□□ -1.3
AFG2YLR397C GIM5Q04493 163 aa6.96□□□□□ -1.3
AFG2YLR397C DFG5Q05031 458 aa6.96□□□□□ -1.3
AFG2YLR397C ISR1Q06098 443 aaKnown RBP6.96□□□□□ -1.3
AFG2YLR397C GPI11Q06636 219 aa6.96□□□□□ -1.3
AFG2YLR397C YDR056CQ12025 205 aa6.96□□□□□ -1.3
AFG2YLR397C PKH2Q12236 1081 aaKnown RBP6.96□□□□□ -1.3
AFG2YLR397C PST2Q12335 198 aaKnown RBP6.96□□□□□ -1.3
AFG2YLR397C ERP3Q12403 225 aa6.96□□□□□ -1.3
AFG2YLR397C HSH49Q99181 213 aaPredicted RBP6.96□□□□□ -1.3
AFG2YLR397C RGS2Q99188 309 aa6.96□□□□□ -1.3
AFG2YLR397C YOR019WQ99248 730 aa6.96□□□□□ -1.3
AFG2YLR397C FSH3Q99369 266 aa6.96□□□□□ -1.3
AFG2YLR397C SWI5P08153 709 aa6.95□□□□□ -1.3
AFG2YLR397C SPO7P18410 259 aa6.95□□□□□ -1.3
AFG2YLR397C ERD2P18414 219 aa6.95□□□□□ -1.3
AFG2YLR397C CSM1P25651 190 aa6.95□□□□□ -1.3
AFG2YLR397C SPS19P32573 292 aaKnown RBP6.95□□□□□ -1.3
AFG2YLR397C DHH1P39517 506 aaKnown RBP6.95□□□□□ -1.3
AFG2YLR397C HPA3P39979 161 aa6.95□□□□□ -1.3
AFG2YLR397C PGD1P40356 397 aa6.95□□□□□ -1.3
AFG2YLR397C TMA108P40462 946 aa6.95□□□□□ -1.3
AFG2YLR397C YGL185CP53100 379 aa6.95□□□□□ -1.3
AFG2YLR397C YGR168CP53293 376 aa6.95□□□□□ -1.3
AFG2YLR397C YNR066CP53752 436 aa6.95□□□□□ -1.3
AFG2YLR397C LSM7P53905 115 aaKnown RBP6.95□□□□□ -1.3
AFG2YLR397C RIM13Q03792 727 aa6.95□□□□□ -1.3
AFG2YLR397C SHH3Q04487 196 aa6.95□□□□□ -1.3
AFG2YLR397C YDR222WQ04925 415 aa6.95□□□□□ -1.3
AFG2YLR397C SRO7Q12038 1033 aa6.95□□□□□ -1.3
AFG2YLR397C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
AFG2YLR397C MHF1Q3E835 90 aa6.95□□□□□ -1.3
AFG2YLR397C SUC2P00724 532 aa6.95□□□□□ -1.3
AFG2YLR397C PRE7P23724 241 aaKnown RBP6.95□□□□□ -1.3
AFG2YLR397C IMG1P25626 169 aa6.95□□□□□ -1.3
AFG2YLR397C SKT5P34226 696 aa6.95□□□□□ -1.3
AFG2YLR397C TCD2P36101 447 aaKnown RBP6.95□□□□□ -1.3
AFG2YLR397C YBR053CP38235 358 aa6.95□□□□□ -1.3
AFG2YLR397C YBR220CP38318 560 aa6.95□□□□□ -1.3
AFG2YLR397C UTP7P40055 554 aaKnown RBP6.95□□□□□ -1.3
AFG2YLR397C MET28P40573 187 aa6.95□□□□□ -1.3
AFG2YLR397C ARF3P40994 183 aaRIP-Chip data6.95□□□□□ -1.3not detected
AFG2YLR397C ROD1Q02805 837 aa6.95□□□□□ -1.3
AFG2YLR397C CCE1Q03702 353 aa6.95□□□□□ -1.3
AFG2YLR397C TVP18Q04767 167 aa6.95□□□□□ -1.3
AFG2YLR397C RIF2Q06208 395 aa6.95□□□□□ -1.3
AFG2YLR397C YDR018CQ12185 396 aa6.95□□□□□ -1.3
AFG2YLR397C NYV1Q12255 253 aa6.95□□□□□ -1.3
AFG2YLR397C LPX1Q12405 387 aaKnown RBP6.95□□□□□ -1.3
AFG2YLR397C MHT1Q12525 324 aa6.95□□□□□ -1.3
AFG2YLR397C YIL134C-AQ45U18 67 aa6.95□□□□□ -1.3
AFG2YLR397C ADH3P07246 375 aaKnown RBP6.94□□□□□ -1.3
AFG2YLR397C ALG7P07286 448 aa6.94□□□□□ -1.3
AFG2YLR397C SPS2P08459 502 aa6.94□□□□□ -1.3
AFG2YLR397C PDX1P16451 410 aa6.94□□□□□ -1.3
AFG2YLR397C MNE1P24720 663 aa6.94□□□□□ -1.3
AFG2YLR397C TMA19P35691 167 aaKnown RBP6.94□□□□□ -1.3
AFG2YLR397C YBR096WP38256 230 aa6.94□□□□□ -1.3
AFG2YLR397C MBA1P38300 278 aa6.94□□□□□ -1.3
AFG2YLR397C FMO1P38866 432 aa6.94□□□□□ -1.3
AFG2YLR397C YJR107WP47145 328 aa6.94□□□□□ -1.3
AFG2YLR397C STR3P53101 465 aaKnown RBP6.94□□□□□ -1.3
AFG2YLR397C COG7P53195 279 aa6.94□□□□□ -1.3
AFG2YLR397C YNL184CP53876 108 aa6.94□□□□□ -1.3
AFG2YLR397C NMA111P53920 997 aa6.94□□□□□ -1.3
AFG2YLR397C LEU9Q12166 604 aaKnown RBP6.94□□□□□ -1.3
AFG2YLR397C PFK27Q12471 397 aaPredicted RBP6.94□□□□□ -1.3
AFG2YLR397C MTR10Q99189 972 aa6.94□□□□□ -1.3
AFG2YLR397C RPL8BP29453 256 aaKnown RBP6.94□□□□□ -1.3
AFG2YLR397C CTF13P35203 478 aa6.94□□□□□ -1.3
AFG2YLR397C TFA2P36145 328 aa6.94□□□□□ -1.3
AFG2YLR397C SNM1P40993 198 aa6.94□□□□□ -1.3
AFG2YLR397C SSU1P41930 458 aa6.94□□□□□ -1.3
AFG2YLR397C RPA34P47006 233 aaPredicted RBP6.94□□□□□ -1.3
AFG2YLR397C TAH11P47112 604 aa6.94□□□□□ -1.3
AFG2YLR397C PEX31P53203 462 aa6.94□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms