RNA–Protein interactions for RNA: YLR325C

RPL38, Transcript of Ribosomal 60S subunit protein L38, yeastyeast

Gene RPL38, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL38YLR325C ROG1P53118 685 aa1.24□□□□□ -2.21
RPL38YLR325C SUB1P54000 292 aaKnown RBP1.24□□□□□ -2.21
RPL38YLR325C MSC3Q05812 728 aa1.24□□□□□ -2.21
RPL38YLR325C DCI1Q08558 271 aa1.24□□□□□ -2.21
RPL38YLR325C YOR376WQ08900 122 aa1.24□□□□□ -2.21
RPL38YLR325C SRO7Q12038 1033 aa1.24□□□□□ -2.21
RPL38YLR325C MCT1Q12283 360 aa1.24□□□□□ -2.21
RPL38YLR325C RNH203Q12338 110 aa1.24□□□□□ -2.21
RPL38YLR325C HMS1Q12398 434 aa1.24□□□□□ -2.21
RPL38YLR325C ISA2Q12425 185 aa1.24□□□□□ -2.21
RPL38YLR325C PAB1P04147 577 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21 RIP-Chip
RPL38YLR325C ARF1P11076 181 aaKnown RBP1.23□□□□□ -2.21
RPL38YLR325C PHO91P27514 894 aa1.23□□□□□ -2.21
RPL38YLR325C FUN26P31381 517 aa1.23□□□□□ -2.21
RPL38YLR325C NRP1P32770 719 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
RPL38YLR325C YSC83P32792 385 aa1.23□□□□□ -2.21
RPL38YLR325C QDR3P38227 689 aa1.23□□□□□ -2.21
RPL38YLR325C TCB2P48231 1178 aa1.23□□□□□ -2.21
RPL38YLR325C TRF5P48561 642 aaKnown RBP1.23□□□□□ -2.21
RPL38YLR325C SEH1P53011 349 aaKnown RBP1.23□□□□□ -2.21
RPL38YLR325C YGR111WP53265 400 aa1.23□□□□□ -2.21
RPL38YLR325C PRP38Q00723 242 aaPredicted RBP1.23□□□□□ -2.21
RPL38YLR325C ERO1Q03103 563 aa1.23□□□□□ -2.21
RPL38YLR325C YLR456WQ06199 204 aa1.23□□□□□ -2.21
RPL38YLR325C SLF1Q12034 447 aaKnown RBP1.23□□□□□ -2.21
RPL38YLR325C PDX1P16451 410 aa1.22□□□□□ -2.21
RPL38YLR325C EPT1P22140 391 aa1.22□□□□□ -2.21
RPL38YLR325C CPR2P23285 205 aa1.22□□□□□ -2.21
RPL38YLR325C DBF4P32325 704 aa1.22□□□□□ -2.21
RPL38YLR325C IME2P32581 645 aa1.22□□□□□ -2.21
RPL38YLR325C ECM34P38728 170 aa1.22□□□□□ -2.21
RPL38YLR325C CHL4P38907 458 aa1.22□□□□□ -2.21
RPL38YLR325C FHL1P39521 936 aa1.22□□□□□ -2.21
RPL38YLR325C SEC27P41811 889 aaKnown RBP1.22□□□□□ -2.21
RPL38YLR325C SRB7P47822 140 aa1.22□□□□□ -2.21
RPL38YLR325C TOM22P49334 152 aa1.22□□□□□ -2.21
RPL38YLR325C PMT5P52867 743 aa1.22□□□□□ -2.21
RPL38YLR325C YGR067CP53243 804 aa1.22□□□□□ -2.21
RPL38YLR325C RRN9P53437 365 aa1.22□□□□□ -2.21
RPL38YLR325C IGO1P53897 168 aa1.22□□□□□ -2.21
RPL38YLR325C RMT2Q03305 412 aa1.22□□□□□ -2.21
RPL38YLR325C FSH2Q05015 223 aa1.22□□□□□ -2.21
RPL38YLR325C RUP1Q12242 671 aa1.22□□□□□ -2.21
RPL38YLR325C TPI1P00942 248 aaKnown RBP1.21□□□□□ -2.22
RPL38YLR325C RPL12AP0CX53 165 aaKnown RBP1.21□□□□□ -2.22
RPL38YLR325C RPL12BP0CX54 165 aa1.21□□□□□ -2.22
RPL38YLR325C RPC53P25441 422 aa1.21□□□□□ -2.22
RPL38YLR325C ZIP1P31111 875 aa1.21□□□□□ -2.22
RPL38YLR325C TPS2P31688 896 aaKnown RBP1.21□□□□□ -2.22
RPL38YLR325C TOA1P32773 286 aa1.21□□□□□ -2.22
RPL38YLR325C LSM12P38828 187 aaKnown RBP1.21□□□□□ -2.22
RPL38YLR325C STB1P42845 420 aa1.21□□□□□ -2.22
RPL38YLR325C KEG1P43614 200 aa1.21□□□□□ -2.22
RPL38YLR325C CIN2P46670 268 aa1.21□□□□□ -2.22
RPL38YLR325C ABM1P47146 123 aa1.21□□□□□ -2.22
RPL38YLR325C COQ5P49017 307 aa1.21□□□□□ -2.22
RPL38YLR325C VHT1P53241 593 aa1.21□□□□□ -2.22
RPL38YLR325C YDR341CQ05506 607 aaKnown RBP1.21□□□□□ -2.22
RPL38YLR325C GAS2Q06135 555 aa1.21□□□□□ -2.22
RPL38YLR325C NSE1Q07913 336 aa1.21□□□□□ -2.22
RPL38YLR325C LDS2Q08218 356 aa1.21□□□□□ -2.22
RPL38YLR325C UAF30Q08747 228 aa1.21□□□□□ -2.22
RPL38YLR325C GPM3Q12326 303 aa1.21□□□□□ -2.22
RPL38YLR325C MEX67Q99257 599 aaKnown RBP1.21□□□□□ -2.22
RPL38YLR325C MSP1P28737 362 aa1.2□□□□□ -2.22
RPL38YLR325C COS9P36034 407 aa1.2□□□□□ -2.22
RPL38YLR325C NAB3P38996 802 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
RPL38YLR325C RRT13P40042 185 aa1.2□□□□□ -2.22
RPL38YLR325C YIR035CP40579 254 aa1.2□□□□□ -2.22
RPL38YLR325C BIO3P50277 480 aa1.2□□□□□ -2.22
RPL38YLR325C CDH1P53197 566 aa1.2□□□□□ -2.22
RPL38YLR325C HST4P53688 370 aa1.2□□□□□ -2.22
RPL38YLR325C VAC7P53950 1165 aa1.2□□□□□ -2.22
RPL38YLR325C RMI1Q02685 241 aa1.2□□□□□ -2.22
RPL38YLR325C MRX11Q03079 207 aa1.2□□□□□ -2.22
RPL38YLR325C GYL1Q04322 720 aa1.2□□□□□ -2.22
RPL38YLR325C URC2Q04411 772 aa1.2□□□□□ -2.22
RPL38YLR325C MRX8Q05473 314 aa1.2□□□□□ -2.22
RPL38YLR325C FLO11P08640 1367 aa1.2□□□□□ -2.22
RPL38YLR325C RPS14AP06367 137 aaKnown RBP1.19□□□□□ -2.22
RPL38YLR325C MDH1P17505 334 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
RPL38YLR325C CHA1P25379 360 aaKnown RBP1.19□□□□□ -2.22
RPL38YLR325C RPL16AP26784 199 aaKnown RBP1.19□□□□□ -2.22
RPL38YLR325C LDS1P31379 325 aa1.19□□□□□ -2.22
RPL38YLR325C ANP1P32629 500 aa1.19□□□□□ -2.22
RPL38YLR325C SPP381P38282 291 aaPredicted RBP1.19□□□□□ -2.22
RPL38YLR325C MNL1P38888 796 aa1.19□□□□□ -2.22
RPL38YLR325C RPS14BP39516 138 aaKnown RBP1.19□□□□□ -2.22
RPL38YLR325C FRT2P39734 528 aa1.19□□□□□ -2.22
RPL38YLR325C PAC11P40960 533 aa1.19□□□□□ -2.22
RPL38YLR325C CTK3P46963 296 aaPredicted RBP1.19□□□□□ -2.22
RPL38YLR325C RNH201P53942 307 aa1.19□□□□□ -2.22
RPL38YLR325C DIA1P54005 336 aa1.19□□□□□ -2.22
RPL38YLR325C SPC19Q03954 165 aa1.19□□□□□ -2.22
RPL38YLR325C ATP16Q12165 160 aa1.19□□□□□ -2.22
RPL38YLR325C LDB17Q12342 491 aa1.19□□□□□ -2.22
RPL38YLR325C AUS1Q08409 1394 aa1.19□□□□□ -2.22
RPL38YLR325C HEM4P06174 275 aa1.18□□□□□ -2.22
RPL38YLR325C RPL23AP0CX41 137 aaKnown RBP1.18□□□□□ -2.22
RPL38YLR325C RPL23BP0CX42 137 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms